RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 LIMD1Q9UGP4 676 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 KIAA1257Q9ULG3 409 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 SORCS3Q9UPU3 1222 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 NCANO14594 1321 aa15.22■□□□□ 0.03
COL3A1-203ENST00000450867 A0A1W2PRU2 124 aa15.22■□□□□ 0.03
COL3A1-203ENST00000450867 AP1G2O75843 785 aa15.22■□□□□ 0.03
COL3A1-203ENST00000450867 FAM200BP0CF97 657 aa15.22■□□□□ 0.03
COL3A1-203ENST00000450867 ALADP13716 330 aa15.22■□□□□ 0.03
COL3A1-203ENST00000450867 FCARP24071 287 aa15.22■□□□□ 0.03
COL3A1-203ENST00000450867 DDX6P26196 483 aaKnown RBP eCLIP15.22■□□□□ 0.03
COL3A1-203ENST00000450867 ZNF165P49910 485 aa15.22■□□□□ 0.03
COL3A1-203ENST00000450867 TEAD2Q15562 447 aa15.22■□□□□ 0.03
COL3A1-203ENST00000450867 TAF12Q16514 161 aa15.22■□□□□ 0.03
COL3A1-203ENST00000450867 ZSCAN23Q3MJ62 389 aa15.22■□□□□ 0.03
COL3A1-203ENST00000450867 PPP1R26Q5T8A7 1209 aaPredicted RBP15.22■□□□□ 0.03
COL3A1-203ENST00000450867 CLEC20AQ6ZU45 233 aa15.22■□□□□ 0.03
COL3A1-203ENST00000450867 RRAGAQ7L523 313 aa15.22■□□□□ 0.03
COL3A1-203ENST00000450867 CREBRFQ8IUR6 639 aa15.22■□□□□ 0.03
COL3A1-203ENST00000450867 ASB16Q96NS5 453 aa15.22■□□□□ 0.03
COL3A1-203ENST00000450867 KCNK16Q96T55 309 aa15.22■□□□□ 0.03
COL3A1-203ENST00000450867 MED10Q9BTT4 135 aa15.22■□□□□ 0.03
COL3A1-203ENST00000450867 MUTYHQ9UIF7 546 aa15.22■□□□□ 0.03
COL3A1-203ENST00000450867 SMTNL1A8MU46 457 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 HHLA1C9JL84 531 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 ECI2O75521 394 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 BEST1O76090 585 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 RTN3O95197 1032 aaPredicted RBP15.21■□□□□ 0.03
COL3A1-203ENST00000450867 ASGR2P07307 311 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 VDRP11473 427 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 NPR3P17342 541 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 RFX1P22670 979 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 PPP3CCP48454 512 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 COPB1P53618 953 aaKnown RBP15.21■□□□□ 0.03
COL3A1-203ENST00000450867 MFAP3P55082 362 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 USP46P62068 366 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 KCNMA1Q12791 1236 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 NFKBIBQ15653 356 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 MEA1Q16626 185 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 ZNF394Q53GI3 561 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 TMEM270Q6UE05 265 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 PARM1Q6UWI2 310 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 UBALD2Q8IYN6 164 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 NUP93Q8N1F7 819 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 STKLD1Q8NE28 680 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 OVCA2Q8WZ82 227 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 SHC3Q92529 594 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 FGF14Q92915 247 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 SMARCD2Q92925 531 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 MCRS1Q96EZ8 462 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 HEXIM2Q96MH2 286 aaKnown RBP15.21■□□□□ 0.03
COL3A1-203ENST00000450867 ZSWIM3Q96MP5 696 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 GCNAQ96QF7 691 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 DUSP16Q9BY84 665 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 UBXN6Q9BZV1 441 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 ATXN3LQ9H3M9 355 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 TASP1Q9H6P5 420 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 UBE2TQ9NPD8 197 aaPredicted RBP15.21■□□□□ 0.03
COL3A1-203ENST00000450867 PLCB1Q9NQ66 1216 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 TAB2Q9NYJ8 693 aa15.21■□□□□ 0.03
COL3A1-203ENST00000450867 RNF225M0QZC1 329 aaPredicted RBP15.2■□□□□ 0.02
COL3A1-203ENST00000450867 O00370 1275 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 GJA1P17302 382 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 PFKLP17858 780 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 ADORA2BP29275 332 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 ZXDAP98168 799 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 TDGQ13569 410 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 STILQ15468 1287 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 PKDCCQ504Y2 493 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 ARHGAP15Q53QZ3 475 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 SGO2Q562F6 1265 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 FAM78AQ5JUQ0 283 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 STXBP5Q5T5C0 1151 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 MON1AQ86VX9 555 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 SLC44A3Q8N4M1 653 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 ANKRD52Q8NB46 1076 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 RBBP8NLQ8NC74 664 aaPredicted RBP15.2■□□□□ 0.02
COL3A1-203ENST00000450867 ANKRD20A12PQ8NF67 263 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 EDAQ92838 391 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 E2F7Q96AV8 911 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 ELSPBP1Q96BH3 223 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 NAA15Q9BXJ9 866 aaKnown RBP15.2■□□□□ 0.02
COL3A1-203ENST00000450867 OBP2AQ9NY56 170 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 MAGED2Q9UNF1 606 aaPredicted RBP15.2■□□□□ 0.02
COL3A1-203ENST00000450867 DAAM1Q9Y4D1 1078 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 PCDHB4Q9Y5E5 795 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 NUMBLQ9Y6R0 609 aa15.2■□□□□ 0.02
COL3A1-203ENST00000450867 LGALS16A8MUM7 142 aa15.19■□□□□ 0.02
COL3A1-203ENST00000450867 TPM2P07951 284 aa15.19■□□□□ 0.02
COL3A1-203ENST00000450867 ZDHHC11BP0C7U3 371 aa15.19■□□□□ 0.02
COL3A1-203ENST00000450867 SLC5A3P53794 718 aa15.19■□□□□ 0.02
COL3A1-203ENST00000450867 CYP4F8P98187 520 aa15.19■□□□□ 0.02
COL3A1-203ENST00000450867 APBA1Q02410 837 aa15.19■□□□□ 0.02
COL3A1-203ENST00000450867 GPR158Q5T848 1215 aa15.19■□□□□ 0.02
COL3A1-203ENST00000450867 SNX30Q5VWJ9 437 aa15.19■□□□□ 0.02
COL3A1-203ENST00000450867 GJB7Q6PEY0 223 aa15.19■□□□□ 0.02
COL3A1-203ENST00000450867 LCLAT1Q6UWP7 414 aa15.19■□□□□ 0.02
COL3A1-203ENST00000450867 TTC30AQ86WT1 665 aa15.19■□□□□ 0.02
COL3A1-203ENST00000450867 PDZD8Q8NEN9 1154 aa15.19■□□□□ 0.02
COL3A1-203ENST00000450867 ZSCAN18Q8TBC5 510 aaPredicted RBP15.19■□□□□ 0.02
COL3A1-203ENST00000450867 RSAD2Q8WXG1 361 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms