RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 LARGE2Q8N3Y3 721 aa9□□□□□ -0.97
LSM5-208ENST00000450169 SERBP1Q8NC51 408 aaKnown RBP eCLIP9□□□□□ -0.97
LSM5-208ENST00000450169 HIPK4Q8NE63 616 aa9□□□□□ -0.97
LSM5-208ENST00000450169 TRIM11Q96F44 468 aa9□□□□□ -0.97
LSM5-208ENST00000450169 DCAF5Q96JK2 942 aa9□□□□□ -0.97
LSM5-208ENST00000450169 NSMCE3Q96MG7 304 aa9□□□□□ -0.97
LSM5-208ENST00000450169 AGPAT1Q99943 283 aa9□□□□□ -0.97
LSM5-208ENST00000450169 DCLK3Q9C098 648 aa9□□□□□ -0.97
LSM5-208ENST00000450169 KLC2Q9H0B6 622 aa9□□□□□ -0.97
LSM5-208ENST00000450169 ZHX3Q9H4I2 956 aa9□□□□□ -0.97
LSM5-208ENST00000450169 SEPT9Q9UHD8 586 aaPredicted RBP9□□□□□ -0.97
LSM5-208ENST00000450169 NOX1Q9Y5S8 564 aa9□□□□□ -0.97
LSM5-208ENST00000450169 BAZ2AQ9UIF9 1905 aaKnown RBP8.99□□□□□ -0.97
LSM5-208ENST00000450169 ARAP2Q8WZ64 1704 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 SMCO2A6NFE2 343 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 USP17L12C9JPN9 530 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 USP17L21D6R901 530 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 SLC16A3O15427 465 aaKnown RBP8.99□□□□□ -0.97
LSM5-208ENST00000450169 SLC37A4O43826 429 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 CALUO43852 315 aaPredicted RBP8.99□□□□□ -0.97
LSM5-208ENST00000450169 TRPA1O75762 1119 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 MTA2O94776 668 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 IL1BP01584 269 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 GYS1P13807 737 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 ZNF23P17027 643 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 GNA11P29992 359 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 CASP5P51878 434 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 SLC5A3P53794 718 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 EPHB1P54762 984 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 CTSWP56202 376 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 PDE1CQ14123 709 aaPredicted RBP8.99□□□□□ -0.97
LSM5-208ENST00000450169 GRM4Q14833 912 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 FASTKD3Q14CZ7 662 aaKnown RBP8.99□□□□□ -0.97
LSM5-208ENST00000450169 CYTH1Q15438 398 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 KNOP1Q1ED39 458 aaKnown RBP8.99□□□□□ -0.97
LSM5-208ENST00000450169 HP1BP3Q5SSJ5 553 aaPredicted RBP8.99□□□□□ -0.97
LSM5-208ENST00000450169 FASTKD5Q7L8L6 764 aaKnown RBP8.99□□□□□ -0.97
LSM5-208ENST00000450169 SYNE4Q8N205 404 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 BANPQ8N9N5 519 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 PNMA1Q8ND90 353 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 SLC20A1Q8WUM9 679 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 PSPC1Q8WXF1 523 aaKnown RBP8.99□□□□□ -0.97
LSM5-208ENST00000450169 EME1Q96AY2 570 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 CCDC124Q96CT7 223 aaKnown RBP8.99□□□□□ -0.97
LSM5-208ENST00000450169 BTBD6Q96KE9 485 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 RIOK1Q9BRS2 568 aaKnown RBP8.99□□□□□ -0.97
LSM5-208ENST00000450169 MXD3Q9BW11 206 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 CCDC106Q9BWC9 280 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 PAIP1Q9H074 479 aaKnown RBP8.99□□□□□ -0.97
LSM5-208ENST00000450169 WWP1Q9H0M0 922 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 C6orf50Q9HD87 102 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 ACP6Q9NPH0 428 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 IGSF9Q9P2J2 1179 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 MAD2L2Q9UI95 211 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 ROBO3Q96MS0 1386 aa8.99□□□□□ -0.97
LSM5-208ENST00000450169 SF3B1O75533 1304 aaKnown RBP eCLIP8.98□□□□□ -0.971e-7■■■■■ 44.8
LSM5-208ENST00000450169 PRR5-ARHGAP8B1AHC4 643 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 USP17L15C9J2P7 530 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 USP17L10C9JJH3 530 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 USP17L13C9JLJ4 530 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 USP17L11C9JVI0 530 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 USP17L18D6R9N7 530 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 USP17L22D6RA61 530 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 USP17L17D6RBQ6 530 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 USP17L19D6RCP7 530 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 USP17L20D6RJB6 530 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 E5RJQ4 531 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 H3BNX3 289 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 GOLGA8RI6L899 631 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 C7P10643 843 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 BGNP21810 368 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 TKTP29401 623 aaKnown RBP8.98□□□□□ -0.97
LSM5-208ENST00000450169 HMOX2P30519 316 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 CASP4P49662 377 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 CABP4P57796 275 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 ARHGAP8P85298 464 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 SLC25A3Q00325 362 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 USP17L24Q0WX57 530 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 PSMD6Q15008 389 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 SF3B3Q15393 1217 aaKnown RBP8.98□□□□□ -0.97
LSM5-208ENST00000450169 OASLQ15646 514 aaKnown RBP8.98□□□□□ -0.97
LSM5-208ENST00000450169 ZNF829Q3KNS6 432 aaPredicted RBP8.98□□□□□ -0.97
LSM5-208ENST00000450169 ITPRIPL1Q6GPH6 555 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 DCLRE1AQ6PJP8 1040 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 RSPH3Q86UC2 560 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 GPBP1Q86WP2 473 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 PEX5LQ8IYB4 626 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 TRIML2Q8N7C3 387 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 ALKBH8Q96BT7 664 aaKnown RBP8.98□□□□□ -0.97
LSM5-208ENST00000450169 SGF29Q96ES7 293 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 ANKRD36BP1Q96IX9 119 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 PLEKHA8Q96JA3 519 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 GIN1Q9NXP7 522 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 ROBO1Q9Y6N7 1651 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 MROH5Q6ZUA9 1318 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 FAM47E-STBD1D6RA91 191 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 SNAP23O00161 211 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 EML1O00423 815 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 PDE8AO60658 829 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 LRRN2O75325 713 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms