RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-223ENST00000449864 TRIM49BA6NDI0 452 aa16.8■□□□□ 0.28
HDLBP-223ENST00000449864 ARNTLO00327 626 aa16.8■□□□□ 0.28
HDLBP-223ENST00000449864 USP17L7P0C7H9 530 aa16.8■□□□□ 0.28
HDLBP-223ENST00000449864 GLULP15104 373 aa16.8■□□□□ 0.28
HDLBP-223ENST00000449864 TARSP26639 723 aaKnown RBP16.8■□□□□ 0.28
HDLBP-223ENST00000449864 HOXD11P31277 338 aaPredicted RBP16.8■□□□□ 0.28
HDLBP-223ENST00000449864 MAGEA9P43362 315 aa16.8■□□□□ 0.28
HDLBP-223ENST00000449864 MRE11P49959 708 aa16.8■□□□□ 0.28
HDLBP-223ENST00000449864 NDST1P52848 882 aa16.8■□□□□ 0.28
HDLBP-223ENST00000449864 CACNA2D1P54289 1103 aa16.8■□□□□ 0.28
HDLBP-223ENST00000449864 FKBP3Q00688 224 aaKnown RBP16.8■□□□□ 0.28
HDLBP-223ENST00000449864 PLCB2Q00722 1185 aa16.8■□□□□ 0.28
HDLBP-223ENST00000449864 IFRD2Q12894 506 aaPredicted RBP16.8■□□□□ 0.28
HDLBP-223ENST00000449864 ORC1Q13415 861 aa16.8■□□□□ 0.28
HDLBP-223ENST00000449864 ALYREFQ86V81 257 aaKnown RBP16.8■□□□□ 0.28
HDLBP-223ENST00000449864 UNC93AQ86WB7 457 aa16.8■□□□□ 0.28
HDLBP-223ENST00000449864 FAM3CQ92520 227 aa16.8■□□□□ 0.28
HDLBP-223ENST00000449864 USP13Q92995 863 aaPredicted RBP16.8■□□□□ 0.28
HDLBP-223ENST00000449864 MSANTD3Q96H12 275 aa16.8■□□□□ 0.28
HDLBP-223ENST00000449864 LRRC3BQ96PB8 259 aa16.8■□□□□ 0.28
HDLBP-223ENST00000449864 DNAI2Q9GZS0 605 aa16.8■□□□□ 0.28
HDLBP-223ENST00000449864 SPATA6Q9NWH7 488 aaPredicted RBP16.8■□□□□ 0.28
HDLBP-223ENST00000449864 TRPM5Q9NZQ8 1165 aa16.8■□□□□ 0.28
HDLBP-223ENST00000449864 CCL26Q9Y258 94 aa16.8■□□□□ 0.28
HDLBP-223ENST00000449864 BIN1O00499 593 aa16.79■□□□□ 0.28
HDLBP-223ENST00000449864 CCNE1P24864 410 aa16.79■□□□□ 0.28
HDLBP-223ENST00000449864 PDE6CP51160 858 aa16.79■□□□□ 0.28
HDLBP-223ENST00000449864 PMS1P54277 932 aaKnown RBP16.79■□□□□ 0.28
HDLBP-223ENST00000449864 USP46P62068 366 aa16.79■□□□□ 0.28
HDLBP-223ENST00000449864 KLHL10Q6JEL2 608 aa16.79■□□□□ 0.28
HDLBP-223ENST00000449864 CC2D1AQ6P1N0 951 aaPredicted RBP16.79■□□□□ 0.28
HDLBP-223ENST00000449864 TTC8Q8TAM2 541 aa16.79■□□□□ 0.28
HDLBP-223ENST00000449864 SMARCD1Q96GM5 515 aa16.79■□□□□ 0.28
HDLBP-223ENST00000449864 DHTKD1Q96HY7 919 aaPredicted RBP16.79■□□□□ 0.28
HDLBP-223ENST00000449864 DMAP1Q9NPF5 467 aaPredicted RBP16.79■□□□□ 0.28
HDLBP-223ENST00000449864 KRT82Q9NSB4 513 aa16.79■□□□□ 0.28
HDLBP-223ENST00000449864 FAM49BQ9NUQ9 324 aa16.79■□□□□ 0.28
HDLBP-223ENST00000449864 TMEM30AQ9NV96 361 aa16.79■□□□□ 0.28
HDLBP-223ENST00000449864 HMGXB4Q9UGU5 601 aa16.79■□□□□ 0.28
HDLBP-223ENST00000449864 KIAA1549LQ6ZVL6 1849 aa16.79■□□□□ 0.28
HDLBP-223ENST00000449864 AP1G2O75843 785 aa16.78■□□□□ 0.28
HDLBP-223ENST00000449864 ABL1P00519 1130 aa16.78■□□□□ 0.28
HDLBP-223ENST00000449864 CCDC130P13994 396 aa16.78■□□□□ 0.28
HDLBP-223ENST00000449864 CD58P19256 250 aa16.78■□□□□ 0.28
HDLBP-223ENST00000449864 SOX9P48436 509 aa16.78■□□□□ 0.28
HDLBP-223ENST00000449864 UBE2HP62256 183 aa16.78■□□□□ 0.28
HDLBP-223ENST00000449864 INCA1Q0VD86 236 aa16.78■□□□□ 0.28
HDLBP-223ENST00000449864 ZNF268Q14587 947 aaPredicted RBP16.78■□□□□ 0.28
HDLBP-223ENST00000449864 C1orf228Q6PIY5 440 aa16.78■□□□□ 0.28
HDLBP-223ENST00000449864 C1orf210Q8IVY1 113 aa16.78■□□□□ 0.28
HDLBP-223ENST00000449864 ZC3H3Q8IXZ2 948 aaKnown RBP16.78■□□□□ 0.28
HDLBP-223ENST00000449864 FBXL13Q8NEE6 735 aa16.78■□□□□ 0.28
HDLBP-223ENST00000449864 SLC2A14Q8TDB8 520 aa16.78■□□□□ 0.28
HDLBP-223ENST00000449864 SLITRK1Q96PX8 696 aa16.78■□□□□ 0.28
HDLBP-223ENST00000449864 TTLL2Q9BWV7 592 aa16.78■□□□□ 0.28
HDLBP-223ENST00000449864 C8orf33Q9H7E9 229 aaPredicted RBP16.78■□□□□ 0.28
HDLBP-223ENST00000449864 CYP3A43Q9HB55 503 aa16.78■□□□□ 0.28
HDLBP-223ENST00000449864 APOBEC3GQ9HC16 384 aaKnown RBP16.78■□□□□ 0.28
HDLBP-223ENST00000449864 GTSE1Q9NYZ3 720 aa16.78■□□□□ 0.28
HDLBP-223ENST00000449864 ARMCX3Q9UH62 379 aaPredicted RBP16.78■□□□□ 0.28
HDLBP-223ENST00000449864 C2orf78A6NCI8 922 aa16.77■□□□□ 0.28
HDLBP-223ENST00000449864 SPECC1L-ADORA2AF8WAN1 911 aa16.77■□□□□ 0.28
HDLBP-223ENST00000449864 LAMTOR5O43504 91 aa16.77■□□□□ 0.28
HDLBP-223ENST00000449864 RTN3O95197 1032 aaPredicted RBP16.77■□□□□ 0.28
HDLBP-223ENST00000449864 CD44P16070 742 aaKnown RBP16.77■□□□□ 0.28
HDLBP-223ENST00000449864 PPP3CCP48454 512 aa16.77■□□□□ 0.28
HDLBP-223ENST00000449864 MLLT6P55198 1093 aaPredicted RBP16.77■□□□□ 0.28
HDLBP-223ENST00000449864 TNK2Q07912 1038 aa16.77■□□□□ 0.28
HDLBP-223ENST00000449864 ITPRIPL2Q3MIP1 535 aa16.77■□□□□ 0.28
HDLBP-223ENST00000449864 CCDC40Q4G0X9 1142 aa16.77■□□□□ 0.28
HDLBP-223ENST00000449864 WDR44Q5JSH3 913 aa16.77■□□□□ 0.28
HDLBP-223ENST00000449864 RALGPS2Q86X27 583 aaPredicted RBP16.77■□□□□ 0.28
HDLBP-223ENST00000449864 FUKQ8N0W3 1084 aa16.77■□□□□ 0.28
HDLBP-223ENST00000449864 NUP93Q8N1F7 819 aa16.77■□□□□ 0.28
HDLBP-223ENST00000449864 ARL14EPQ8N8R7 260 aaPredicted RBP16.77■□□□□ 0.28
HDLBP-223ENST00000449864 CLDN23Q96B33 292 aa16.77■□□□□ 0.28
HDLBP-223ENST00000449864 SLC22A12Q96S37 553 aa16.77■□□□□ 0.28
HDLBP-223ENST00000449864 CYP2S1Q96SQ9 504 aa16.77■□□□□ 0.28
HDLBP-223ENST00000449864 KCNK16Q96T55 309 aa16.77■□□□□ 0.28
HDLBP-223ENST00000449864 NT5C1AQ9BXI3 368 aa16.77■□□□□ 0.28
HDLBP-223ENST00000449864 GKN1Q9NS71 199 aa16.77■□□□□ 0.28
HDLBP-223ENST00000449864 RAB20Q9NX57 234 aa16.77■□□□□ 0.28
HDLBP-223ENST00000449864 CTNND2Q9UQB3 1225 aa16.77■□□□□ 0.28
HDLBP-223ENST00000449864 PIEZO1Q92508 2521 aa16.77■□□□□ 0.28
HDLBP-223ENST00000449864 ATG2BQ96BY7 2078 aa16.76■□□□□ 0.27
HDLBP-223ENST00000449864 BICDL2A1A5D9 508 aa16.76■□□□□ 0.27
HDLBP-223ENST00000449864 HDCP19113 662 aa16.76■□□□□ 0.27
HDLBP-223ENST00000449864 YWHAQP27348 245 aa16.76■□□□□ 0.27
HDLBP-223ENST00000449864 ADORA2BP29275 332 aa16.76■□□□□ 0.27
HDLBP-223ENST00000449864 CTHP32929 405 aa16.76■□□□□ 0.27
HDLBP-223ENST00000449864 RPS9P46781 194 aaKnown RBP16.76■□□□□ 0.27
HDLBP-223ENST00000449864 TAF10Q12962 218 aa16.76■□□□□ 0.27
HDLBP-223ENST00000449864 USP4Q13107 963 aa16.76■□□□□ 0.27
HDLBP-223ENST00000449864 MTF1Q14872 753 aa16.76■□□□□ 0.27
HDLBP-223ENST00000449864 CRYBG2Q8N1P7 616 aa16.76■□□□□ 0.27
HDLBP-223ENST00000449864 PDZD8Q8NEN9 1154 aa16.76■□□□□ 0.27
HDLBP-223ENST00000449864 NELFBQ8WX92 580 aa16.76■□□□□ 0.27
HDLBP-223ENST00000449864 SEMA4DQ92854 862 aa16.76■□□□□ 0.27
HDLBP-223ENST00000449864 FBXO32Q969P5 355 aa16.76■□□□□ 0.27
HDLBP-223ENST00000449864 CEP63Q96MT8 703 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms