RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 PPP2R3CQ969Q6 453 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 MARK4Q96L34 752 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 EPB41L4BQ9H329 900 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 IL1RAPL1Q9NZN1 696 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 FBXO40Q9UH90 709 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 GOLGA8TH3BQL2 631 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 CDH8P55286 799 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 USP46P62068 366 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 TBL3Q12788 808 aaKnown RBP12.9□□□□□ -0.34
UBE3B-204ENST00000449510 CUL2Q13617 745 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 ANKRD20A4Q4UJ75 823 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 JADE1Q6IE81 842 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 RBM44Q6ZP01 1051 aaKnown RBP12.9□□□□□ -0.34
UBE3B-204ENST00000449510 HDAC11Q96DB2 347 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 MXRA8Q9BRK3 442 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 MTMR12Q9C0I1 747 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 CFHP08603 1231 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 MCF2P10911 925 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 GM2AP17900 193 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 CIITAP33076 1130 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 MMRN1Q13201 1228 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 TFDP2Q14188 446 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 TRMT5Q32P41 509 aaKnown RBP12.9□□□□□ -0.34
UBE3B-204ENST00000449510 SLC44A4Q53GD3 710 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 RALGPS1Q5JS13 557 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 SPDYCQ5MJ68 293 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 VWA5B1Q5TIE3 1220 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 LRRC8EQ6NSJ5 796 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 SATL1Q86VE3 508 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 GALNT15Q8N3T1 639 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 ECSITQ9BQ95 431 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 ETNK2Q9NVF9 386 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 SOX13Q9UN79 622 aa12.9□□□□□ -0.34
UBE3B-204ENST00000449510 RTN3O95197 1032 aaPredicted RBP12.9□□□□□ -0.35
UBE3B-204ENST00000449510 SLC4A1P02730 911 aa12.9□□□□□ -0.35
UBE3B-204ENST00000449510 FESP07332 822 aa12.9□□□□□ -0.35
UBE3B-204ENST00000449510 TFE3P19532 575 aaPredicted RBP12.9□□□□□ -0.35
UBE3B-204ENST00000449510 SH3BGRP55822 239 aaPredicted RBP12.9□□□□□ -0.35
UBE3B-204ENST00000449510 NME5P56597 212 aa12.9□□□□□ -0.35
UBE3B-204ENST00000449510 POU5F1Q01860 360 aaKnown RBP12.9□□□□□ -0.35
UBE3B-204ENST00000449510 BAATQ14032 418 aaPredicted RBP12.9□□□□□ -0.35
UBE3B-204ENST00000449510 SLC5A9Q2M3M2 681 aa12.9□□□□□ -0.35
UBE3B-204ENST00000449510 TRIM67Q6ZTA4 783 aa12.9□□□□□ -0.35
UBE3B-204ENST00000449510 ZNF333Q96JL9 665 aa12.9□□□□□ -0.35
UBE3B-204ENST00000449510 HSD17B14Q9BPX1 270 aa12.9□□□□□ -0.35
UBE3B-204ENST00000449510 EBF3Q9H4W6 596 aa12.9□□□□□ -0.35
UBE3B-204ENST00000449510 SLC38A10Q9HBR0 1119 aa12.9□□□□□ -0.35
UBE3B-204ENST00000449510 SAR1AQ9NR31 198 aa12.9□□□□□ -0.35
UBE3B-204ENST00000449510 SLC24A2Q9UI40 661 aa12.9□□□□□ -0.35
UBE3B-204ENST00000449510 PCDHA10Q9Y5I2 948 aa12.9□□□□□ -0.35
UBE3B-204ENST00000449510 SNX13Q9Y5W8 968 aa12.9□□□□□ -0.35
UBE3B-204ENST00000449510 SRGAP2BP0DMP2 458 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 CHRM1P11229 460 aaPredicted RBP12.89□□□□□ -0.35
UBE3B-204ENST00000449510 RPL22P35268 128 aaKnown RBP12.89□□□□□ -0.35
UBE3B-204ENST00000449510 GARSP41250 739 aaKnown RBP12.89□□□□□ -0.35
UBE3B-204ENST00000449510 PPIDQ08752 370 aaKnown RBP12.89□□□□□ -0.35
UBE3B-204ENST00000449510 MAMLD1Q13495 774 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 FASTKD1Q53R41 847 aaKnown RBP12.89□□□□□ -0.35
UBE3B-204ENST00000449510 TTC39BQ5VTQ0 682 aaPredicted RBP12.89□□□□□ -0.35
UBE3B-204ENST00000449510 HEATR6Q6AI08 1181 aaKnown RBP12.89□□□□□ -0.35
UBE3B-204ENST00000449510 PID1Q7Z2X4 250 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 ZBTB8OSQ8IWT0 167 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 PFDN4Q9NQP4 134 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 RNF19AQ9NV58 838 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 NYAP2Q9P242 653 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 HERC5Q9UII4 1024 aaKnown RBP12.89□□□□□ -0.35
UBE3B-204ENST00000449510 DOLKQ9UPQ8 538 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 NID2Q14112 1375 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 LIASO43766 372 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 FSCBQ5H9T9 825 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 CYP2R1Q6VVX0 501 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 HPS6Q86YV9 775 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 UNC45BQ8IWX7 931 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 SHC3Q92529 594 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 ANKRD36BP1Q96IX9 119 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 HERPUD2Q9BSE4 406 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 CCDC90BQ9GZT6 254 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 AAASQ9NRG9 546 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 KLHL8Q9P2G9 620 aaPredicted RBP12.89□□□□□ -0.35
UBE3B-204ENST00000449510 ZNF212Q9UDV6 495 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 AKAP10O43572 662 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 F7P08709 466 aaPredicted RBP12.89□□□□□ -0.35
UBE3B-204ENST00000449510 MYL6P60660 151 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 MARK2Q7KZI7 788 aaKnown RBP12.89□□□□□ -0.35
UBE3B-204ENST00000449510 ZNF513Q8N8E2 541 aaPredicted RBP12.89□□□□□ -0.35
UBE3B-204ENST00000449510 OR6Y1Q8NGX8 325 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 UTP4Q969X6 686 aaKnown RBP12.89□□□□□ -0.35
UBE3B-204ENST00000449510 THEGQ9P2T0 379 aa12.89□□□□□ -0.35
UBE3B-204ENST00000449510 OR6B1O95007 311 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 CYP3A4P08684 503 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 DSG3P32926 999 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 GNL1P36915 607 aaPredicted RBP12.88□□□□□ -0.35
UBE3B-204ENST00000449510 SKIV2L2P42285 1042 aaKnown RBP12.88□□□□□ -0.35
UBE3B-204ENST00000449510 FNBP1LQ5T0N5 605 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 TXNRD3NBQ6F5E7 133 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 ENOSF1Q7L5Y1 443 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 SLC26A11Q86WA9 606 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 LRRC71Q8N4P6 559 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 PTPRN2Q92932 1015 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 RNPEPQ9H4A4 650 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms