RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 SPPL2BQ8TCT7 592 aa20.33■□□□□ 0.85
RPS28-202ENST00000449223 HSFX1Q9UBD0 423 aa20.33■□□□□ 0.85
RPS28-202ENST00000449223 PCDHB5Q9Y5E4 795 aa20.33■□□□□ 0.85
RPS28-202ENST00000449223 PCDHGC5Q9Y5F6 944 aa20.33■□□□□ 0.85
RPS28-202ENST00000449223 CDY1Q9Y6F8 540 aa20.33■□□□□ 0.85
RPS28-202ENST00000449223 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.32■□□□□ 0.84
RPS28-202ENST00000449223 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.32■□□□□ 0.84
RPS28-202ENST00000449223 MTMR11A4FU01 709 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 HHLA1C9JL84 531 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 KIF2AO00139 706 aaPredicted RBP20.32■□□□□ 0.84
RPS28-202ENST00000449223 GABBR2O75899 941 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 ERBB2P04626 1255 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 BDNFP23560 247 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 SCNN1AP37088 669 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 ROR1Q01973 937 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 PTPN14Q15678 1187 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 IFI16Q16666 785 aaKnown RBP20.32■□□□□ 0.84
RPS28-202ENST00000449223 PPP1R15BQ5SWA1 713 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 XYLT1Q86Y38 959 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 MCRS1Q96EZ8 462 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 MRPL47Q9HD33 250 aaKnown RBP20.32■□□□□ 0.84
RPS28-202ENST00000449223 MRPL17Q9NRX2 175 aaKnown RBP20.32■□□□□ 0.84
RPS28-202ENST00000449223 PARVAQ9NVD7 372 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 PDE4DIPQ5VU43 2346 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 CHD7Q9P2D1 2997 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 MACROD2A1Z1Q3 448 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 E5RJQ4 531 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 KIF5CO60282 957 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 ABLIM3O94929 683 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 ARHGEF15O94989 841 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 CA3P07451 260 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 CPB1P15086 417 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 MYOGP15173 224 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 CACNA2D1P54289 1103 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 ERVK-21P61565 698 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 ETF1P62495 437 aaKnown RBP20.32■□□□□ 0.84
RPS28-202ENST00000449223 MAMLD1Q13495 774 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 C2CD6Q53TS8 623 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 TPGS2Q68CL5 300 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 TRIM58Q8NG06 486 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 TGS1Q96RS0 853 aaKnown RBP20.32■□□□□ 0.84
RPS28-202ENST00000449223 C17orf80Q9BSJ5 609 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 C11orf84Q9BUA3 381 aaPredicted RBP20.32■□□□□ 0.84
RPS28-202ENST00000449223 ST7Q9NRC1 585 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 TJP2Q9UDY2 1190 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 MAFFQ9ULX9 164 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 COG5Q9UP83 839 aa20.32■□□□□ 0.84
RPS28-202ENST00000449223 WDR27A2RRH5 827 aa20.31■□□□□ 0.84
RPS28-202ENST00000449223 ATMINO43313 823 aaPredicted RBP20.31■□□□□ 0.84
RPS28-202ENST00000449223 VNN2O95498 520 aa20.31■□□□□ 0.84
RPS28-202ENST00000449223 MAP3K7CLP57077 242 aa20.31■□□□□ 0.84
RPS28-202ENST00000449223 TAP1Q03518 808 aa20.31■□□□□ 0.84
RPS28-202ENST00000449223 TPCN2Q8NHX9 752 aa20.31■□□□□ 0.84
RPS28-202ENST00000449223 ZNF461Q8TAF7 563 aa20.31■□□□□ 0.84
RPS28-202ENST00000449223 SPPL3Q8TCT6 385 aa20.31■□□□□ 0.84
RPS28-202ENST00000449223 C8orf48Q96LL4 319 aa20.31■□□□□ 0.84
RPS28-202ENST00000449223 CEP295NLQ96MC4 621 aa20.31■□□□□ 0.84
RPS28-202ENST00000449223 NUP85Q9BW27 656 aa20.31■□□□□ 0.84
RPS28-202ENST00000449223 PBX4Q9BYU1 374 aa20.31■□□□□ 0.84
RPS28-202ENST00000449223 IRX2Q9BZI1 471 aaPredicted RBP20.31■□□□□ 0.84
RPS28-202ENST00000449223 SYNCQ9H7C4 482 aa20.31■□□□□ 0.84
RPS28-202ENST00000449223 OSGEPQ9NPF4 335 aa20.31■□□□□ 0.84
RPS28-202ENST00000449223 CTTNBP2NLQ9P2B4 639 aa20.31■□□□□ 0.84
RPS28-202ENST00000449223 AFF4Q9UHB7 1163 aaKnown RBP20.31■□□□□ 0.84
RPS28-202ENST00000449223 YBX2Q9Y2T7 364 aaKnown RBP20.31■□□□□ 0.84
RPS28-202ENST00000449223 CAPN6Q9Y6Q1 641 aa20.31■□□□□ 0.84
RPS28-202ENST00000449223 LAMA3Q16787 3333 aa20.31■□□□□ 0.84
RPS28-202ENST00000449223 COL4A4P53420 1690 aaPredicted RBP20.3■□□□□ 0.84
RPS28-202ENST00000449223 ADAM12O43184 909 aa20.3■□□□□ 0.84
RPS28-202ENST00000449223 CYP2F1P24903 491 aa20.3■□□□□ 0.84
RPS28-202ENST00000449223 OR1D2P34982 312 aa20.3■□□□□ 0.84
RPS28-202ENST00000449223 RAB33AQ14088 237 aa20.3■□□□□ 0.84
RPS28-202ENST00000449223 RAB30Q15771 203 aa20.3■□□□□ 0.84
RPS28-202ENST00000449223 CYP4A22Q5TCH4 519 aa20.3■□□□□ 0.84
RPS28-202ENST00000449223 OLFML1Q6UWY5 402 aa20.3■□□□□ 0.84
RPS28-202ENST00000449223 RNF19BQ6ZMZ0 732 aa20.3■□□□□ 0.84
RPS28-202ENST00000449223 ARCQ7LC44 396 aa20.3■□□□□ 0.84
RPS28-202ENST00000449223 TDHQ8IZJ6 230 aa20.3■□□□□ 0.84
RPS28-202ENST00000449223 SCML4Q8N228 414 aa20.3■□□□□ 0.84
RPS28-202ENST00000449223 LRRC57Q8N9N7 239 aa20.3■□□□□ 0.84
RPS28-202ENST00000449223 ZNF564Q8TBZ8 553 aaPredicted RBP20.3■□□□□ 0.84
RPS28-202ENST00000449223 C16orf45Q96MC5 204 aaPredicted RBP20.3■□□□□ 0.84
RPS28-202ENST00000449223 KCNK16Q96T55 309 aa20.3■□□□□ 0.84
RPS28-202ENST00000449223 RHOBTB2Q9BYZ6 727 aa20.3■□□□□ 0.84
RPS28-202ENST00000449223 PRO3102Q9H379 93 aa20.3■□□□□ 0.84
RPS28-202ENST00000449223 ABI2Q9NYB9 513 aaPredicted RBP20.3■□□□□ 0.84
RPS28-202ENST00000449223 LCMT1Q9UIC8 334 aa20.3■□□□□ 0.84
RPS28-202ENST00000449223 PAXBP1Q9Y5B6 917 aa20.3■□□□□ 0.84
RPS28-202ENST00000449223 SIGLEC16A6NMB1 481 aa20.29■□□□□ 0.84
RPS28-202ENST00000449223 C2CD2LO14523 706 aa20.29■□□□□ 0.84
RPS28-202ENST00000449223 TRIM66O15016 1216 aa20.29■□□□□ 0.84
RPS28-202ENST00000449223 PAPSS1O43252 624 aaPredicted RBP20.29■□□□□ 0.84
RPS28-202ENST00000449223 RGS7P49802 495 aa20.29■□□□□ 0.84
RPS28-202ENST00000449223 NDUFV1P49821 464 aa20.29■□□□□ 0.84
RPS28-202ENST00000449223 DNAJC24Q6P3W2 148 aa20.29■□□□□ 0.84
RPS28-202ENST00000449223 SLFN11Q7Z7L1 901 aa20.29■□□□□ 0.84
RPS28-202ENST00000449223 ALS2CR12Q96Q35 445 aa20.29■□□□□ 0.84
RPS28-202ENST00000449223 FAM170AA1A519 330 aa20.28■□□□□ 0.84
RPS28-202ENST00000449223 F8VP50 259 aa20.28■□□□□ 0.84
RPS28-202ENST00000449223 TNFRSF10BO14763 440 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms