RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 EFTUD2Q15029 972 aaKnown RBP eCLIP7.44□□□□□ -1.22
BEST1-202ENST00000449131 KIZQ2M2Z5 673 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 IQCKQ8N0W5 287 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 ZSWIM2Q8NEG5 633 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 SLC16A10Q8TF71 515 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 FAM172AQ8WUF8 416 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 TRAPPC12Q8WVT3 735 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 CENPKQ9BS16 269 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 BEGAINQ9BUH8 593 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 TASP1Q9H6P5 420 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 C20orf96Q9NUD7 363 aaPredicted RBP7.44□□□□□ -1.22
BEST1-202ENST00000449131 TMA7Q9Y2S6 64 aaKnown RBP7.44□□□□□ -1.22
BEST1-202ENST00000449131 PIK3CDO00329 1044 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 TNPO2O14787 897 aaKnown RBP7.44□□□□□ -1.22
BEST1-202ENST00000449131 NVLO15381 856 aaKnown RBP7.44□□□□□ -1.22
BEST1-202ENST00000449131 LSM8O95777 96 aaKnown RBP7.44□□□□□ -1.22
BEST1-202ENST00000449131 PECAM1P16284 738 aaPredicted RBP7.44□□□□□ -1.22
BEST1-202ENST00000449131 GRIK1P39086 918 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 GCLCP48506 637 aaPredicted RBP7.44□□□□□ -1.22
BEST1-202ENST00000449131 MMP14P50281 582 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 VCPP55072 806 aaKnown RBP7.44□□□□□ -1.22
BEST1-202ENST00000449131 TMTC4Q5T4D3 741 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 HGSNATQ68CP4 663 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 IL31Q6EBC2 164 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 NOTUMQ6P988 496 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 SUGP1Q8IWZ8 645 aaKnown RBP7.44□□□□□ -1.22
BEST1-202ENST00000449131 CCDC138Q96M89 665 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 CNPY3Q9BT09 278 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 MRIQ9BWK5 157 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 A1CFQ9NQ94 594 aaKnown RBP7.44□□□□□ -1.22
BEST1-202ENST00000449131 NINJ2Q9NZG7 142 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 DLGAP2Q9P1A6 1054 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 TSR3Q9UJK0 312 aaKnown RBP7.44□□□□□ -1.22
BEST1-202ENST00000449131 DNPEPQ9ULA0 475 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 FAM208AQ9UK61 1670 aaKnown RBP7.44□□□□□ -1.22
BEST1-202ENST00000449131 CCL15-CCL14A0A0B4J2E2 113 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 M0QYT0 321 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 ATP9AO75110 1047 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 SNHG28P0DPA3 235 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 NCAM1P13591 858 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 ENO3P13929 434 aaPredicted RBP7.44□□□□□ -1.22
BEST1-202ENST00000449131 SSTR1P30872 391 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 NUMBP49757 651 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 CCL15Q16663 113 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 HYIQ5T013 277 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 METTL7BQ6UX53 244 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 ANO5Q75V66 913 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 FAM131BQ86XD5 332 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 CCDC60Q8IWA6 550 aaPredicted RBP7.44□□□□□ -1.22
BEST1-202ENST00000449131 PRELID2Q8N945 189 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 PTPRN2Q92932 1015 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 TMEM176AQ96HP8 235 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 FRMD8Q9BZ67 464 aaPredicted RBP7.44□□□□□ -1.22
BEST1-202ENST00000449131 XAB2Q9HCS7 855 aaKnown RBP7.44□□□□□ -1.22
BEST1-202ENST00000449131 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.44□□□□□ -1.22
BEST1-202ENST00000449131 EP400Q96L91 3159 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 RNF103-CHMP3A0A140T963 221 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 F8VP50 259 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 DNALI1O14645 258 aaPredicted RBP7.43□□□□□ -1.22
BEST1-202ENST00000449131 TRAPPC3O43617 180 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 SNX2O60749 519 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 LGR5O75473 907 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 ZSCAN5DPP0CG00 497 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 ZCCHC18P0CG32 403 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 CPB1P15086 417 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 EPHB2P29323 1055 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 SOX11P35716 441 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 PTGER2P43116 358 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 TAF6P49848 677 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 FKBP1AP62942 108 aaKnown RBP7.43□□□□□ -1.22
BEST1-202ENST00000449131 GTF2BQ00403 316 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 DGKDQ16760 1214 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 SV2CQ496J9 727 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 CRY2Q49AN0 593 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 DNAL1Q4LDG9 190 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 PRPF39Q86UA1 669 aaKnown RBP7.43□□□□□ -1.22
BEST1-202ENST00000449131 VSIG10LQ86VR7 867 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 PALB2Q86YC2 1186 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 PABPC5Q96DU9 382 aaKnown RBP7.43□□□□□ -1.22
BEST1-202ENST00000449131 PGM2Q96G03 612 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 RMDN2Q96LZ7 410 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 SPATC1LQ9H0A9 340 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 AVENQ9NQS1 362 aaPredicted RBP7.43□□□□□ -1.22
BEST1-202ENST00000449131 UBQLN1Q9UMX0 589 aaKnown RBP7.43□□□□□ -1.22
BEST1-202ENST00000449131 RPS6KL1Q9Y6S9 549 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.43□□□□□ -1.22
BEST1-202ENST00000449131 AIM2O14862 343 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 ADCY3O60266 1144 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 CBX6O95503 412 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 ZNF235Q14590 738 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 TAF1CQ15572 869 aaPredicted RBP7.43□□□□□ -1.22
BEST1-202ENST00000449131 PCSK7Q16549 785 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 PPP4R4Q6NUP7 873 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 DENND5BQ6ZUT9 1274 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 SPATA2LQ8IUW3 424 aaPredicted RBP7.43□□□□□ -1.22
BEST1-202ENST00000449131 FAM71AQ8IYT1 594 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 ATPAF2Q8N5M1 289 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 ICA1LQ8NDH6 482 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 TMEM161BQ8NDZ6 487 aa7.43□□□□□ -1.22
BEST1-202ENST00000449131 IPMKQ8NFU5 416 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms