RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 TANGO2Q6ICL3 276 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 TMC8Q8IU68 726 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 ZNF687Q8N1G0 1237 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 MLKLQ8NB16 471 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 STKLD1Q8NE28 680 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 GPT2Q8TD30 523 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 ATRIPQ8WXE1 791 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 SLC35C1Q96A29 364 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 MCRS1Q96EZ8 462 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 PCED1BQ96HM7 432 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 TNIP3Q96KP6 325 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 SDCBP2Q9H190 292 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 ZNF334Q9HCZ1 680 aaPredicted RBP15.51■□□□□ 0.07
USP39-206ENST00000448971 RAB20Q9NX57 234 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 ZSCAN32Q9NX65 697 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 GDE1Q9NZC3 331 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 RWDD2AQ9UIY3 292 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 MAGED2Q9UNF1 606 aaPredicted RBP15.51■□□□□ 0.07
USP39-206ENST00000448971 NME7Q9Y5B8 376 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 ATP8B3O60423 1300 aa15.5■□□□□ 0.07
USP39-206ENST00000448971 FGF19O95750 216 aa15.5■□□□□ 0.07
USP39-206ENST00000448971 GNA14O95837 355 aa15.5■□□□□ 0.07
USP39-206ENST00000448971 CCDC192P0DO97 292 aa15.5■□□□□ 0.07
USP39-206ENST00000448971 PTPN1P18031 435 aaKnown RBP15.5■□□□□ 0.07
USP39-206ENST00000448971 CD58P19256 250 aa15.5■□□□□ 0.07
USP39-206ENST00000448971 GABRR2P28476 465 aa15.5■□□□□ 0.07
USP39-206ENST00000448971 EPHA5P54756 1037 aa15.5■□□□□ 0.07
USP39-206ENST00000448971 ORC1Q13415 861 aa15.5■□□□□ 0.07
USP39-206ENST00000448971 TEAD2Q15562 447 aa15.5■□□□□ 0.07
USP39-206ENST00000448971 DDR2Q16832 855 aa15.5■□□□□ 0.07
USP39-206ENST00000448971 DPCR1Q3MIW9 517 aa15.5■□□□□ 0.07
USP39-206ENST00000448971 FAM171BQ6P995 826 aa15.5■□□□□ 0.07
USP39-206ENST00000448971 TPRG1Q6ZUI0 275 aa15.5■□□□□ 0.07
USP39-206ENST00000448971 DNAJB7Q7Z6W7 309 aaPredicted RBP15.5■□□□□ 0.07
USP39-206ENST00000448971 SHKBP1Q8TBC3 707 aa15.5■□□□□ 0.07
USP39-206ENST00000448971 MYCBPAPQ8TBZ2 947 aa15.5■□□□□ 0.07
USP39-206ENST00000448971 SRRTQ9BXP5 876 aaKnown RBP15.5■□□□□ 0.07
USP39-206ENST00000448971 EPC1Q9H2F5 836 aa15.5■□□□□ 0.07
USP39-206ENST00000448971 ATXN3LQ9H3M9 355 aa15.5■□□□□ 0.07
USP39-206ENST00000448971 APOBEC3GQ9HC16 384 aaKnown RBP15.5■□□□□ 0.07
USP39-206ENST00000448971 HEBP1Q9NRV9 189 aa15.5■□□□□ 0.07
USP39-206ENST00000448971 HMGXB4Q9UGU5 601 aa15.5■□□□□ 0.07
USP39-206ENST00000448971 NRG2O14511 850 aaPredicted RBP15.49■□□□□ 0.07
USP39-206ENST00000448971 CSH1P0DML2 217 aa15.49■□□□□ 0.07
USP39-206ENST00000448971 CSH2P0DML3 217 aa15.49■□□□□ 0.07
USP39-206ENST00000448971 BDNFP23560 247 aa15.49■□□□□ 0.07
USP39-206ENST00000448971 CDC25CP30307 473 aa15.49■□□□□ 0.07
USP39-206ENST00000448971 GRIK1P39086 918 aa15.49■□□□□ 0.07
USP39-206ENST00000448971 NDST1P52848 882 aa15.49■□□□□ 0.07
USP39-206ENST00000448971 ATXN1P54253 815 aaKnown RBP15.49■□□□□ 0.07
USP39-206ENST00000448971 ARHGAP15Q53QZ3 475 aa15.49■□□□□ 0.07
USP39-206ENST00000448971 TSSK4Q6SA08 328 aa15.49■□□□□ 0.07
USP39-206ENST00000448971 VSTM1Q6UX27 236 aa15.49■□□□□ 0.07
USP39-206ENST00000448971 ZNF852Q6ZMS4 543 aa15.49■□□□□ 0.07
USP39-206ENST00000448971 MAMSTRQ6ZN01 415 aa15.49■□□□□ 0.07
USP39-206ENST00000448971 CREBRFQ8IUR6 639 aa15.49■□□□□ 0.07
USP39-206ENST00000448971 GPR161Q8N6U8 529 aaKnown RBP15.49■□□□□ 0.07
USP39-206ENST00000448971 SEMA4DQ92854 862 aa15.49■□□□□ 0.07
USP39-206ENST00000448971 ELSPBP1Q96BH3 223 aa15.49■□□□□ 0.07
USP39-206ENST00000448971 MED10Q9BTT4 135 aa15.49■□□□□ 0.07
USP39-206ENST00000448971 ELOVL4Q9GZR5 314 aa15.49■□□□□ 0.07
USP39-206ENST00000448971 PRMT8Q9NR22 394 aaPredicted RBP15.49■□□□□ 0.07
USP39-206ENST00000448971 NCDNQ9UBB6 729 aa15.49■□□□□ 0.07
USP39-206ENST00000448971 CHD8Q9HCK8 2581 aa15.49■□□□□ 0.07
USP39-206ENST00000448971 CNOT1A5YKK6 2376 aaKnown RBP15.48■□□□□ 0.07
USP39-206ENST00000448971 TRIM66O15016 1216 aa15.48■□□□□ 0.07
USP39-206ENST00000448971 NCAM2O15394 837 aa15.48■□□□□ 0.07
USP39-206ENST00000448971 MICAL2O94851 1124 aa15.48■□□□□ 0.07
USP39-206ENST00000448971 TDGF1P13385 188 aa15.48■□□□□ 0.07
USP39-206ENST00000448971 FCARP24071 287 aa15.48■□□□□ 0.07
USP39-206ENST00000448971 MAGEA11P43364 429 aa15.48■□□□□ 0.07
USP39-206ENST00000448971 FMO5P49326 533 aa15.48■□□□□ 0.07
USP39-206ENST00000448971 NLRP12P59046 1061 aa15.48■□□□□ 0.07
USP39-206ENST00000448971 CYP4F8P98187 520 aa15.48■□□□□ 0.07
USP39-206ENST00000448971 CETN1Q12798 172 aa15.48■□□□□ 0.07
USP39-206ENST00000448971 MTAPQ13126 283 aa15.48■□□□□ 0.07
USP39-206ENST00000448971 ACOT1Q86TX2 421 aa15.48■□□□□ 0.07
USP39-206ENST00000448971 FAM35AQ86V20 835 aa15.48■□□□□ 0.07
USP39-206ENST00000448971 UNC93AQ86WB7 457 aa15.48■□□□□ 0.07
USP39-206ENST00000448971 CNOT6LQ96LI5 555 aaKnown RBP15.48■□□□□ 0.07
USP39-206ENST00000448971 LRRC3Q9BY71 257 aa15.48■□□□□ 0.07
USP39-206ENST00000448971 ZNF518BQ9C0D4 1074 aa15.48■□□□□ 0.07
USP39-206ENST00000448971 DNAI2Q9GZS0 605 aa15.48■□□□□ 0.07
USP39-206ENST00000448971 CYP3A43Q9HB55 503 aa15.48■□□□□ 0.07
USP39-206ENST00000448971 UXTQ9UBK9 157 aaPredicted RBP15.48■□□□□ 0.07
USP39-206ENST00000448971 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.48■□□□□ 0.07
USP39-206ENST00000448971 SLC38A8A6NNN8 435 aa15.47■□□□□ 0.07
USP39-206ENST00000448971 MOSPD3O75425 235 aa15.47■□□□□ 0.07
USP39-206ENST00000448971 MCCD1P59942 119 aaPredicted RBP15.47■□□□□ 0.07
USP39-206ENST00000448971 INCA1Q0VD86 236 aa15.47■□□□□ 0.07
USP39-206ENST00000448971 LRMPQ12912 555 aa15.47■□□□□ 0.07
USP39-206ENST00000448971 STXBP5Q5T5C0 1151 aa15.47■□□□□ 0.07
USP39-206ENST00000448971 GPR158Q5T848 1215 aa15.47■□□□□ 0.07
USP39-206ENST00000448971 GAREM2Q75VX8 874 aa15.47■□□□□ 0.07
USP39-206ENST00000448971 TRIM59Q8IWR1 403 aa15.47■□□□□ 0.07
USP39-206ENST00000448971 ZSCAN18Q8TBC5 510 aaPredicted RBP15.47■□□□□ 0.07
USP39-206ENST00000448971 CNTNAP3BQ96NU0 1288 aa15.47■□□□□ 0.07
USP39-206ENST00000448971 NT5C1AQ9BXI3 368 aa15.47■□□□□ 0.07
USP39-206ENST00000448971 FAM126AQ9BYI3 521 aaPredicted RBP15.47■□□□□ 0.07
USP39-206ENST00000448971 CNTNAP3Q9BZ76 1288 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms