RNA–Protein interactions for RNA: ENST00000444811.6

NELFE-206, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-206ENST00000444811 COL4A2P08572 1712 aa20.87■□□□□ 0.93
NELFE-206ENST00000444811 ZNF638Q14966 1978 aaKnown RBP20.86■□□□□ 0.93
NELFE-206ENST00000444811 AP1G2O75843 785 aa20.86■□□□□ 0.93
NELFE-206ENST00000444811 BEST1O76090 585 aa20.86■□□□□ 0.93
NELFE-206ENST00000444811 PSMC3P17980 439 aa20.86■□□□□ 0.93
NELFE-206ENST00000444811 DDX6P26196 483 aaKnown RBP eCLIP20.86■□□□□ 0.93
NELFE-206ENST00000444811 VCPP55072 806 aaKnown RBP20.86■□□□□ 0.93
NELFE-206ENST00000444811 ZNF394Q53GI3 561 aa20.86■□□□□ 0.93
NELFE-206ENST00000444811 MON1AQ86VX9 555 aa20.86■□□□□ 0.93
NELFE-206ENST00000444811 MFSD6LQ8IWD5 586 aa20.86■□□□□ 0.93
NELFE-206ENST00000444811 CMTM8Q8IZV2 173 aa20.86■□□□□ 0.93
NELFE-206ENST00000444811 SLC4A11Q8NBS3 891 aa20.86■□□□□ 0.93
NELFE-206ENST00000444811 DEPDC1BQ8WUY9 529 aa20.86■□□□□ 0.93
NELFE-206ENST00000444811 MRPS31Q92665 395 aaKnown RBP20.86■□□□□ 0.93
NELFE-206ENST00000444811 E2F7Q96AV8 911 aa20.86■□□□□ 0.93
NELFE-206ENST00000444811 HNRNPABQ99729 332 aaKnown RBP20.86■□□□□ 0.93
NELFE-206ENST00000444811 TRMT61BQ9BVS5 477 aaKnown RBP20.86■□□□□ 0.93
NELFE-206ENST00000444811 SMG9Q9H0W8 520 aaKnown RBP20.86■□□□□ 0.93
NELFE-206ENST00000444811 FAM124BQ9H5Z6 455 aaPredicted RBP20.86■□□□□ 0.93
NELFE-206ENST00000444811 CSNK1G1Q9HCP0 422 aa20.86■□□□□ 0.93
NELFE-206ENST00000444811 DMAP1Q9NPF5 467 aaPredicted RBP20.86■□□□□ 0.93
NELFE-206ENST00000444811 ARHGEF3Q9NR81 526 aa20.86■□□□□ 0.93
NELFE-206ENST00000444811 ZMYM5Q9UJ78 669 aa20.86■□□□□ 0.93
NELFE-206ENST00000444811 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.86■□□□□ 0.93
NELFE-206ENST00000444811 CFAP54Q96N23 3096 aa20.85■□□□□ 0.93
NELFE-206ENST00000444811 SOBPA7XYQ1 873 aa20.85■□□□□ 0.93
NELFE-206ENST00000444811 TNFRSF10BO14763 440 aa20.85■□□□□ 0.93
NELFE-206ENST00000444811 AFPP02771 609 aaKnown RBP20.85■□□□□ 0.93
NELFE-206ENST00000444811 ERCC5P28715 1186 aaPredicted RBP20.85■□□□□ 0.93
NELFE-206ENST00000444811 ADORA2BP29275 332 aa20.85■□□□□ 0.93
NELFE-206ENST00000444811 RAD23BP54727 409 aa20.85■□□□□ 0.93
NELFE-206ENST00000444811 SUGP1Q8IWZ8 645 aaKnown RBP20.85■□□□□ 0.93
NELFE-206ENST00000444811 NUP93Q8N1F7 819 aa20.85■□□□□ 0.93
NELFE-206ENST00000444811 TTC39CQ8N584 583 aa20.85■□□□□ 0.93
NELFE-206ENST00000444811 CYFIP2Q96F07 1278 aa20.85■□□□□ 0.93
NELFE-206ENST00000444811 OBP2AQ9NY56 170 aa20.85■□□□□ 0.93
NELFE-206ENST00000444811 PFKPQ01813 784 aa20.84■□□□□ 0.93
NELFE-206ENST00000444811 FCHO2Q0JRZ9 810 aa20.84■□□□□ 0.93
NELFE-206ENST00000444811 SLC44A4Q53GD3 710 aa20.84■□□□□ 0.93
NELFE-206ENST00000444811 CLEC20AQ6ZU45 233 aa20.84■□□□□ 0.93
NELFE-206ENST00000444811 EHBP1Q8NDI1 1231 aa20.84■□□□□ 0.93
NELFE-206ENST00000444811 RIN3Q8TB24 985 aa20.84■□□□□ 0.93
NELFE-206ENST00000444811 KAT5Q92993 513 aa20.84■□□□□ 0.93
NELFE-206ENST00000444811 USP13Q92995 863 aaPredicted RBP20.84■□□□□ 0.93
NELFE-206ENST00000444811 TMEM176AQ96HP8 235 aa20.84■□□□□ 0.93
NELFE-206ENST00000444811 NT5C1BQ96P26 610 aa20.84■□□□□ 0.93
NELFE-206ENST00000444811 SLC22A12Q96S37 553 aa20.84■□□□□ 0.93
NELFE-206ENST00000444811 IL37Q9NZH6 218 aa20.84■□□□□ 0.93
NELFE-206ENST00000444811 GCNT4Q9P109 453 aa20.84■□□□□ 0.93
NELFE-206ENST00000444811 CCL26Q9Y258 94 aa20.84■□□□□ 0.93
NELFE-206ENST00000444811 KIF26AQ9ULI4 1882 aaPredicted RBP20.84■□□□□ 0.93
NELFE-206ENST00000444811 PATJQ8NI35 1801 aa20.83■□□□□ 0.93
NELFE-206ENST00000444811 C2orf78A6NCI8 922 aa20.83■□□□□ 0.93
NELFE-206ENST00000444811 HHLA1C9JL84 531 aa20.83■□□□□ 0.93
NELFE-206ENST00000444811 ARNTLO00327 626 aa20.83■□□□□ 0.93
NELFE-206ENST00000444811 MBD3O95983 291 aa20.83■□□□□ 0.93
NELFE-206ENST00000444811 FAM200BP0CF97 657 aa20.83■□□□□ 0.93
NELFE-206ENST00000444811 AVPR2P30518 371 aa20.83■□□□□ 0.93
NELFE-206ENST00000444811 GDI1P31150 447 aa20.83■□□□□ 0.93
NELFE-206ENST00000444811 SLC5A3P53794 718 aa20.83■□□□□ 0.93
NELFE-206ENST00000444811 MAP3K7CLP57077 242 aa20.83■□□□□ 0.93
NELFE-206ENST00000444811 TAF10Q12962 218 aa20.83■□□□□ 0.93
NELFE-206ENST00000444811 MLF2Q15773 248 aaPredicted RBP20.83■□□□□ 0.93
NELFE-206ENST00000444811 PPP1R26Q5T8A7 1209 aaPredicted RBP20.83■□□□□ 0.93
NELFE-206ENST00000444811 ARHGEF19Q8IW93 802 aa20.83■□□□□ 0.93
NELFE-206ENST00000444811 TMEM105Q8N8V8 129 aa20.83■□□□□ 0.93
NELFE-206ENST00000444811 FLCNQ8NFG4 579 aa20.83■□□□□ 0.93
NELFE-206ENST00000444811 SCAMP5Q8TAC9 235 aa20.83■□□□□ 0.93
NELFE-206ENST00000444811 PHOX2BQ99453 314 aa20.83■□□□□ 0.93
NELFE-206ENST00000444811 MFSD1Q9H3U5 465 aa20.83■□□□□ 0.93
NELFE-206ENST00000444811 BRD9Q9H8M2 597 aa20.83■□□□□ 0.93
NELFE-206ENST00000444811 TRPC7Q9HCX4 862 aa20.83■□□□□ 0.93
NELFE-206ENST00000444811 DACH1Q9UI36 760 aa20.83■□□□□ 0.93
NELFE-206ENST00000444811 CACNA1HO95180 2353 aa20.82■□□□□ 0.92
NELFE-206ENST00000444811 ZNF840PA6NDX5 716 aa20.82■□□□□ 0.92
NELFE-206ENST00000444811 SHISA7A6NL88 538 aa20.82■□□□□ 0.92
NELFE-206ENST00000444811 DPYSL4O14531 572 aa20.82■□□□□ 0.92
NELFE-206ENST00000444811 PI15O43692 258 aa20.82■□□□□ 0.92
NELFE-206ENST00000444811 RTN3O95197 1032 aaPredicted RBP20.82■□□□□ 0.92
NELFE-206ENST00000444811 TRIM21P19474 475 aaKnown RBP20.82■□□□□ 0.92
NELFE-206ENST00000444811 ACO1P21399 889 aaKnown RBP20.82■□□□□ 0.92
NELFE-206ENST00000444811 TBXAS1P24557 533 aaPredicted RBP20.82■□□□□ 0.92
NELFE-206ENST00000444811 AVPR1AP37288 418 aa20.82■□□□□ 0.92
NELFE-206ENST00000444811 STARD6P59095 220 aa20.82■□□□□ 0.92
NELFE-206ENST00000444811 CETN1Q12798 172 aa20.82■□□□□ 0.92
NELFE-206ENST00000444811 IFRD2Q12894 506 aaPredicted RBP20.82■□□□□ 0.92
NELFE-206ENST00000444811 CT47A1Q5JQC4 288 aaPredicted RBP20.82■□□□□ 0.92
NELFE-206ENST00000444811 ARHGAP17Q68EM7 881 aa20.82■□□□□ 0.92
NELFE-206ENST00000444811 ASTLQ6HA08 431 aaPredicted RBP20.82■□□□□ 0.92
NELFE-206ENST00000444811 PHLDB3Q6NSJ2 640 aa20.82■□□□□ 0.92
NELFE-206ENST00000444811 CELF5Q8N6W0 485 aaKnown RBP20.82■□□□□ 0.92
NELFE-206ENST00000444811 PRSS33Q8NF86 280 aa20.82■□□□□ 0.92
NELFE-206ENST00000444811 DNASE1L2Q92874 299 aa20.82■□□□□ 0.92
NELFE-206ENST00000444811 HEXIM2Q96MH2 286 aaKnown RBP20.82■□□□□ 0.92
NELFE-206ENST00000444811 CYP2S1Q96SQ9 504 aa20.82■□□□□ 0.92
NELFE-206ENST00000444811 THAP9Q9H5L6 903 aa20.82■□□□□ 0.92
NELFE-206ENST00000444811 TBC1D17Q9HA65 648 aa20.82■□□□□ 0.92
NELFE-206ENST00000444811 TRPV5Q9NQA5 729 aa20.82■□□□□ 0.92
NELFE-206ENST00000444811 EHD2Q9NZN4 543 aa20.82■□□□□ 0.92
NELFE-206ENST00000444811 TRPM5Q9NZQ8 1165 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms