RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 CNTN6Q9UQ52 1028 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 NUMBLQ9Y6R0 609 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 VCANP13611 3396 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 SMTNL1A8MU46 457 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 NRG2O14511 850 aaPredicted RBP15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 VDRP11473 427 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 GJA1P17302 382 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 PFKLP17858 780 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 SLC9A1P19634 815 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 ACO1P21399 889 aaKnown RBP15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 PON1P27169 355 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 MFAP3P55082 362 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 NCAPHQ15003 741 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 SGO2Q562F6 1265 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 HSP90AA4PQ58FG1 418 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 FAM78AQ5JUQ0 283 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 GPR158Q5T848 1215 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 PPP1R26Q5T8A7 1209 aaPredicted RBP15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 POTEHQ6S545 545 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 PARM1Q6UWI2 310 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 RRAGAQ7L523 313 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 ARHGEF19Q8IW93 802 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 ZMIZ2Q8NF64 920 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 ZSCAN18Q8TBC5 510 aaPredicted RBP15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 OVCA2Q8WZ82 227 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 MRPS31Q92665 395 aaKnown RBP15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 KCNK16Q96T55 309 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 SMOQ99835 787 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 CRACR2AQ9BSW2 395 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 C1QTNF1Q9BXJ1 281 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 DUSP16Q9BY84 665 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 SLITRK6Q9H5Y7 841 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 EPHX3Q9H6B9 360 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 ZFP14Q9HCL3 533 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 APEX2Q9UBZ4 518 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 DUSP12Q9UNI6 340 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 PCDHB4Q9Y5E5 795 aa15.93■□□□□ 0.14
CSNK1E-210ENST00000442216 LRRC10BA6NIK2 292 aa15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 TNFRSF10BO14763 440 aa15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 CAVIN2O95810 425 aa15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 NPR3P17342 541 aa15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 ADORA2BP29275 332 aa15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 SIGLEC14Q08ET2 396 aa15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 KRT31Q15323 416 aa15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 STILQ15468 1287 aa15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 TMEM270Q6UE05 265 aa15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 CLEC20AQ6ZU45 233 aa15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 STKLD1Q8NE28 680 aa15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 RSAD2Q8WXG1 361 aa15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 KAT5Q92993 513 aa15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 ZSWIM3Q96MP5 696 aa15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 KREMEN1Q96MU8 473 aa15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 SLITRK1Q96PX8 696 aa15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 UBXN6Q9BZV1 441 aa15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 FBXO44Q9H4M3 255 aa15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 UBE2TQ9NPD8 197 aaPredicted RBP15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 OBP2AQ9NY56 170 aa15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 LIMA1Q9UHB6 759 aaKnown RBP15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 KIF26AQ9ULI4 1882 aaPredicted RBP15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 NCANO14594 1321 aa15.92■□□□□ 0.14
CSNK1E-210ENST00000442216 SYCE3A1L190 88 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 FAM92AA1XBS5 289 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 TADA3O75528 432 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 BEST1O76090 585 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 SRFP11831 508 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 ZNF18P17022 549 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 FCARP24071 287 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 YWHAQP27348 245 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 ZNF165P49910 485 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 PDE6CP51160 858 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 ZNF132P52740 706 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 SLC5A3P53794 718 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 MAP3K7CLP57077 242 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 SLC8A3P57103 927 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 USP46P62068 366 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 CYP4F8P98187 520 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 MON1AQ86VX9 555 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 CMTM8Q8IZV2 173 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 AOPEPQ8N6M6 819 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 ANKRD52Q8NB46 1076 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 PDZD8Q8NEN9 1154 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 DEPDC1BQ8WUY9 529 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 SLC46A2Q9BY10 475 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 SLC2A4RGQ9NR83 387 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 TRPM5Q9NZQ8 1165 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 TECTAO75443 2155 aa15.91■□□□□ 0.14
CSNK1E-210ENST00000442216 HHLA1C9JL84 531 aa15.9■□□□□ 0.14
CSNK1E-210ENST00000442216 PES1O00541 588 aaKnown RBP15.9■□□□□ 0.14
CSNK1E-210ENST00000442216 GPR37L1O60883 481 aa15.9■□□□□ 0.14
CSNK1E-210ENST00000442216 CDK11BP21127 795 aaKnown RBP15.9■□□□□ 0.14
CSNK1E-210ENST00000442216 RFX1P22670 979 aa15.9■□□□□ 0.14
CSNK1E-210ENST00000442216 KCNMA1Q12791 1236 aa15.9■□□□□ 0.14
CSNK1E-210ENST00000442216 STXBP5Q5T5C0 1151 aa15.9■□□□□ 0.14
CSNK1E-210ENST00000442216 SNX30Q5VWJ9 437 aa15.9■□□□□ 0.14
CSNK1E-210ENST00000442216 TANGO2Q6ICL3 276 aa15.9■□□□□ 0.14
CSNK1E-210ENST00000442216 TRIM67Q6ZTA4 783 aa15.9■□□□□ 0.14
CSNK1E-210ENST00000442216 ARID3BQ8IVW6 561 aaPredicted RBP15.9■□□□□ 0.14
CSNK1E-210ENST00000442216 RBBP8NLQ8NC74 664 aaPredicted RBP15.9■□□□□ 0.14
CSNK1E-210ENST00000442216 RPP25Q9BUL9 199 aaKnown RBP15.9■□□□□ 0.14
CSNK1E-210ENST00000442216 HSD3B7Q9H2F3 369 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms