RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 ZNF185O15231 689 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 DDHD2O94830 711 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 CTAGE8P0CG41 777 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 RDXP35241 583 aaKnown RBP8.51□□□□□ -1.05
CCDC39-201ENST00000442201 RFC2P35250 354 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 LONRF2Q1L5Z9 754 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 CCDC181Q5TID7 509 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 HHATQ5VTY9 493 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 CTAGE6Q86UF2 777 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 METTL23Q86XA0 190 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 ZNF280BQ86YH2 543 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 CTAGE4Q8IX94 777 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 FEZF2Q8TBJ5 459 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 SPATA18Q8TC71 538 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 COG1Q8WTW3 980 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 CPXM1Q96SM3 734 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 CYTH4Q9UIA0 394 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 TIMM13Q9Y5L4 95 aaPredicted RBP8.51□□□□□ -1.05
CCDC39-201ENST00000442201 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.51□□□□□ -1.05
CCDC39-201ENST00000442201 MIF4GDA9UHW6 222 aaKnown RBP8.51□□□□□ -1.05
CCDC39-201ENST00000442201 SPOPO43791 374 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 PCSK1P29120 753 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 PAFAH1B1P43034 410 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 BRCC3P46736 316 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 PSMC1P62191 440 aaKnown RBP8.51□□□□□ -1.05
CCDC39-201ENST00000442201 TAP1Q03518 808 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 IKBKEQ14164 716 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 TCTN1Q2MV58 587 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 CYP4A22Q5TCH4 519 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 DCUN1D2Q6PH85 259 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 TTC30AQ86WT1 665 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 HASPINQ8TF76 798 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 RSPH1Q8WYR4 309 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 HES6Q96HZ4 224 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 BTBD6Q96KE9 485 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 RNF14Q9UBS8 474 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 DSEQ9UL01 958 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 FAM169AQ9Y6X4 670 aa8.51□□□□□ -1.05
CCDC39-201ENST00000442201 GOLGA6CA6NDK9 693 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 GOLGA6BA6NDN3 693 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 I3L4J1 428 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 FESP07332 822 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 GOLGA6DP0CG33 693 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 CCDC130P13994 396 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 PTPN1P18031 435 aaKnown RBP8.5□□□□□ -1.05
CCDC39-201ENST00000442201 COMTP21964 271 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 ACAT1P24752 427 aaKnown RBP8.5□□□□□ -1.05
CCDC39-201ENST00000442201 ADORA2BP29275 332 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 GCKP35557 465 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 OR1G1P47890 313 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 BCAT1P54687 386 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 SNX16P57768 344 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 ZNF268Q14587 947 aaPredicted RBP8.5□□□□□ -1.05
CCDC39-201ENST00000442201 PKDCCQ504Y2 493 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 CNKSR3Q6P9H4 555 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 SPATA21Q7Z572 469 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 CREG2Q8IUH2 290 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 NPAS4Q8IUM7 802 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 COLGALT2Q8IYK4 626 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 ANKRD52Q8NB46 1076 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 PBKQ96KB5 322 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 SUSD3Q96L08 255 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 LPIN3Q9BQK8 851 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 SELENOOQ9BVL4 669 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 MRPL9Q9BYD2 267 aaKnown RBP8.5□□□□□ -1.05
CCDC39-201ENST00000442201 TRIM7Q9C029 511 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 PRDM5Q9NQX1 630 aaPredicted RBP8.5□□□□□ -1.05
CCDC39-201ENST00000442201 GOLGA6AQ9NYA3 693 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 TMEM189-UBE2V1I3L0A0 370 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 M0QZQ0 153 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 PDLIM1O00151 329 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 CES2O00748 559 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 B4GALT3O60512 393 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 CYP11A1P05108 521 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 PYGLP06737 847 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 SLC1A1P43005 524 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 BST2Q10589 180 aaKnown RBP8.5□□□□□ -1.05
CCDC39-201ENST00000442201 CFAP221Q4G0U5 840 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 CD300LGQ6UXG3 332 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 UBL4BQ8N7F7 174 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.5□□□□□ -1.05
CCDC39-201ENST00000442201 SLC2A14Q8TDB8 520 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 STK32AQ8WU08 396 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 RPGRIP1Q96KN7 1286 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 SYT15Q9BQS2 421 aa8.5□□□□□ -1.05
CCDC39-201ENST00000442201 PRG3Q9Y2Y8 225 aaPredicted RBP8.5□□□□□ -1.05
CCDC39-201ENST00000442201 PDCD11Q14690 1871 aaKnown RBP8.5□□□□□ -1.05
CCDC39-201ENST00000442201 TCRBV5S1A1TA0A578 114 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 TMEM191CA6NGB0 347 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 GOLGA8SH3BPF8 625 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 TRAPPC3O43617 180 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 AHCYL1O43865 530 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 ATP2C2O75185 946 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 PROSCO94903 275 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 ERBB2P04626 1255 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 ITGB1P05556 798 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 PFKMP08237 780 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 PYGBP11216 843 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 KRT3P12035 628 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 RAG1P15918 1043 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms