RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 ELOVL4Q9GZR5 314 aa8.3□□□□□ -1.08
CD44-211ENST00000442151 AGPAT3Q9NRZ7 376 aa8.3□□□□□ -1.08
CD44-211ENST00000442151 EXOC1Q9NV70 894 aa8.3□□□□□ -1.08
CD44-211ENST00000442151 DUS2Q9NX74 493 aaKnown RBP8.3□□□□□ -1.08
CD44-211ENST00000442151 RCOR1Q9UKL0 485 aa8.3□□□□□ -1.08
CD44-211ENST00000442151 CDV3Q9UKY7 258 aaKnown RBP8.3□□□□□ -1.08
CD44-211ENST00000442151 USP18Q9UMW8 372 aa8.3□□□□□ -1.08
CD44-211ENST00000442151 FRMD4BQ9Y2L6 1034 aa8.3□□□□□ -1.08
CD44-211ENST00000442151 CLSTN1O94985 981 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 SLFN14P0C7P3 912 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 DLATP10515 647 aaKnown RBP8.29□□□□□ -1.08
CD44-211ENST00000442151 CYP2F1P24903 491 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 RPL13P26373 211 aaKnown RBP8.29□□□□□ -1.08
CD44-211ENST00000442151 KRT85P78386 507 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 CYP27A1Q02318 531 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 CYP24A1Q07973 514 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 PON2Q15165 354 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 E2F4Q16254 413 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 DDR2Q16832 855 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 SOWAHAQ2M3V2 549 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 RESP18Q5W5W9 173 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 DENND5BQ6ZUT9 1274 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 TTC9BQ8N6N2 239 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 RDH13Q8NBN7 331 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 TMEM174Q8WUU8 243 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 OSCP1Q8WVF1 389 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 OVCA2Q8WZ82 227 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 EPAS1Q99814 870 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 FAM83CQ9BQN1 747 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 RTKNQ9BST9 563 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 MKNK1Q9BUB5 465 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 TRPC7Q9HCX4 862 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 TBC1D14Q9P2M4 693 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 GMPR2Q9P2T1 348 aaKnown RBP8.29□□□□□ -1.08
CD44-211ENST00000442151 MYO15AQ9UKN7 3530 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 TCHHQ07283 1943 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 A8MXQ7 604 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 CHURC1-FNTBB4DL54 471 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 PDGFRBP09619 1106 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 PTPN1P18031 435 aaKnown RBP8.29□□□□□ -1.08
CD44-211ENST00000442151 CMA1P23946 247 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 ACAT1P24752 427 aaKnown RBP8.29□□□□□ -1.08
CD44-211ENST00000442151 CYP2J2P51589 502 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 NOP14P78316 857 aaKnown RBP8.29□□□□□ -1.08
CD44-211ENST00000442151 ENPEPQ07075 957 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 BYSLQ13895 437 aaKnown RBP8.29□□□□□ -1.08
CD44-211ENST00000442151 MTF1Q14872 753 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 E2F5Q15329 346 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 SGSM1Q2NKQ1 1148 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 WDR72Q3MJ13 1102 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 ZNF667Q5HYK9 610 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 TMEM196Q5HYL7 178 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 STXBP5Q5T5C0 1151 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 SHC4Q6S5L8 630 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 PRR23BQ6ZRT6 265 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 CACNA2D4Q7Z3S7 1137 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 LIMS2Q7Z4I7 341 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.29□□□□□ -1.08
CD44-211ENST00000442151 CBWD2Q8IUF1 395 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 SLC9A9Q8IVB4 645 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 TTC39CQ8N584 583 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 USP13Q92995 863 aaPredicted RBP8.29□□□□□ -1.08
CD44-211ENST00000442151 CD101Q93033 1021 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 CCDC127Q96BQ5 260 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 P2RY13Q9BPV8 354 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 IMPG2Q9BZV3 1241 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 VRTNQ9H8Y1 702 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 TMLHEQ9NVH6 421 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 GTSE1Q9NYZ3 720 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 SIX4Q9UIU6 781 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 PCDHA7Q9UN72 937 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 ARHGAP26Q9UNA1 814 aa8.29□□□□□ -1.08
CD44-211ENST00000442151 CACNA1HO95180 2353 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 A0A087X0B3 334 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.28□□□□□ -1.08
CD44-211ENST00000442151 PDXKO00764 312 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 TERTO14746 1132 aaKnown RBP8.28□□□□□ -1.08
CD44-211ENST00000442151 IKBKBO14920 756 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 CLIC2O15247 247 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 ZBTB24O43167 697 aaPredicted RBP8.28□□□□□ -1.08
CD44-211ENST00000442151 TGFB1I1O43294 461 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 RHOBTB1O94844 696 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 BDNFP23560 247 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 YWHAQP27348 245 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 AFMP43652 599 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 SATB1Q01826 763 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 GOLGA8FQ08AF8 430 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 GOLGA8DPQ0D2H9 430 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 BIRC3Q13489 604 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 HSF5Q4G112 596 aaPredicted RBP8.28□□□□□ -1.08
CD44-211ENST00000442151 TXNDC8Q6A555 127 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 TSSK4Q6SA08 328 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 NELFCDQ8IXH7 590 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 NUP93Q8N1F7 819 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 OR5B17Q8NGF7 314 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 CXorf38Q8TB03 319 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 SCFD1Q8WVM8 642 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 OTUB2Q96DC9 234 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 RSPRY1Q96DX4 576 aa8.28□□□□□ -1.08
CD44-211ENST00000442151 PKMYT1Q99640 499 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms