RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 APOPT1Q96IL0 206 aa21.19■□□□□ 0.98
SHOX2-203ENST00000441443 DNAJC1Q96KC8 554 aaKnown RBP21.19■□□□□ 0.98
SHOX2-203ENST00000441443 ACAP3Q96P50 834 aa21.19■□□□□ 0.98
SHOX2-203ENST00000441443 TBC1D30Q9Y2I9 924 aa21.19■□□□□ 0.98
SHOX2-203ENST00000441443 GREB1LQ9C091 1923 aaPredicted RBP21.19■□□□□ 0.98
SHOX2-203ENST00000441443 ARHGAP42A6NI28 874 aa21.19■□□□□ 0.98
SHOX2-203ENST00000441443 PRR5-ARHGAP8B1AHC4 643 aa21.19■□□□□ 0.98
SHOX2-203ENST00000441443 ZNF862O60290 1169 aa21.19■□□□□ 0.98
SHOX2-203ENST00000441443 NPM3O75607 178 aaKnown RBP21.19■□□□□ 0.98
SHOX2-203ENST00000441443 ARHGAP8P85298 464 aa21.19■□□□□ 0.98
SHOX2-203ENST00000441443 FAM102BQ5T8I3 360 aa21.19■□□□□ 0.98
SHOX2-203ENST00000441443 DRICH1Q6PGQ1 229 aaPredicted RBP21.19■□□□□ 0.98
SHOX2-203ENST00000441443 MPP4Q96JB8 637 aa21.19■□□□□ 0.98
SHOX2-203ENST00000441443 TAGLN3Q9UI15 199 aa21.19■□□□□ 0.98
SHOX2-203ENST00000441443 DRG1Q9Y295 367 aaKnown RBP21.19■□□□□ 0.98
SHOX2-203ENST00000441443 IKBKGQ9Y6K9 419 aa21.19■□□□□ 0.98
SHOX2-203ENST00000441443 NFIBO00712 420 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 FAM155BO75949 473 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 PGM3O95394 542 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 PABPC4LP0CB38 370 aaKnown RBP21.18■□□□□ 0.98
SHOX2-203ENST00000441443 PSMC5P62195 406 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 UBAP2LQ14157 1087 aaKnown RBP21.18■□□□□ 0.98
SHOX2-203ENST00000441443 RNF111Q6ZNA4 994 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 IGDCC3Q8IVU1 814 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 DNAAF2Q9NVR5 837 aaKnown RBP21.18■□□□□ 0.98
SHOX2-203ENST00000441443 IL1RAPL1Q9NZN1 696 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 PDLIM1O00151 329 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 TXNDC9O14530 226 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 SORBS2O94875 1100 aaKnown RBP21.18■□□□□ 0.98
SHOX2-203ENST00000441443 DPEP1P16444 411 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 NRLP54845 237 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 AQP4P55087 323 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 GCNT1Q02742 428 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 DLG1Q12959 904 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 CES4AQ5XG92 561 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 PDSS2Q86YH6 399 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 HIPK4Q8NE63 616 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 FEZF2Q8TBJ5 459 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 RILPQ96NA2 401 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 SENP7Q9BQF6 1050 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 MRPL11Q9Y3B7 192 aaKnown RBP21.18■□□□□ 0.98
SHOX2-203ENST00000441443 SNCAIPQ9Y6H5 919 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 TMEM63AO94886 807 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 AQP5P55064 265 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 NOMO3P69849 1222 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 TMPRSS15P98073 1019 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 PDE1BQ01064 536 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 BST1Q10588 318 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 ASPHQ12797 758 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 TTLL12Q14166 644 aaPredicted RBP21.18■□□□□ 0.98
SHOX2-203ENST00000441443 KBTBD12Q3ZCT8 623 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 B3GNT9Q6UX72 402 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 LCA5Q86VQ0 697 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 PPIL6Q8IXY8 311 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 NME8Q8N427 588 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 USP6NLQ92738 828 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 CCDC28BQ9BUN5 200 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 CNTN3Q9P232 1028 aa21.18■□□□□ 0.98
SHOX2-203ENST00000441443 MAPTP10636 758 aaKnown RBP21.17■□□□□ 0.98
SHOX2-203ENST00000441443 SLC25A3Q00325 362 aa21.17■□□□□ 0.98
SHOX2-203ENST00000441443 MAP3K10Q02779 954 aa21.17■□□□□ 0.98
SHOX2-203ENST00000441443 CIAPIN1Q6FI81 312 aa21.17■□□□□ 0.98
SHOX2-203ENST00000441443 PLEKHA7Q6IQ23 1121 aa21.17■□□□□ 0.98
SHOX2-203ENST00000441443 IL31RAQ8NI17 732 aa21.17■□□□□ 0.98
SHOX2-203ENST00000441443 ZNF526Q8TF50 670 aaPredicted RBP21.17■□□□□ 0.98
SHOX2-203ENST00000441443 IQCGQ9H095 443 aaKnown RBP21.17■□□□□ 0.98
SHOX2-203ENST00000441443 TBX20Q9UMR3 447 aa21.17■□□□□ 0.98
SHOX2-203ENST00000441443 KAT6AQ92794 2004 aa21.17■□□□□ 0.98
SHOX2-203ENST00000441443 hCG_1818297A0A087WSY0 165 aa21.17■□□□□ 0.98
SHOX2-203ENST00000441443 MSLNQ13421 630 aaPredicted RBP21.17■□□□□ 0.98
SHOX2-203ENST00000441443 STKLD1Q8NE28 680 aa21.17■□□□□ 0.98
SHOX2-203ENST00000441443 SLC26A7Q8TE54 656 aa21.17■□□□□ 0.98
SHOX2-203ENST00000441443 TMEM174Q8WUU8 243 aa21.17■□□□□ 0.98
SHOX2-203ENST00000441443 RHBDL2Q9NX52 303 aa21.17■□□□□ 0.98
SHOX2-203ENST00000441443 KCNK4Q9NYG8 393 aa21.17■□□□□ 0.98
SHOX2-203ENST00000441443 FETUBQ9UGM5 382 aa21.17■□□□□ 0.98
SHOX2-203ENST00000441443 NFASCO94856 1347 aa21.16■□□□□ 0.98
SHOX2-203ENST00000441443 IQANK1A0A1B0GTG1 560 aa21.16■□□□□ 0.98
SHOX2-203ENST00000441443 CYB561D2O14569 222 aa21.16■□□□□ 0.98
SHOX2-203ENST00000441443 ITGAVP06756 1048 aa21.16■□□□□ 0.98
SHOX2-203ENST00000441443 CYP24A1Q07973 514 aa21.16■□□□□ 0.98
SHOX2-203ENST00000441443 TMEM270Q6UE05 265 aa21.16■□□□□ 0.98
SHOX2-203ENST00000441443 DHDDSQ86SQ9 333 aa21.16■□□□□ 0.98
SHOX2-203ENST00000441443 NAT8LQ8N9F0 302 aa21.16■□□□□ 0.98
SHOX2-203ENST00000441443 FAM172AQ8WUF8 416 aa21.16■□□□□ 0.98
SHOX2-203ENST00000441443 SRPK1Q96SB4 655 aaKnown RBP21.16■□□□□ 0.98
SHOX2-203ENST00000441443 S100A14Q9HCY8 104 aa21.16■□□□□ 0.98
SHOX2-203ENST00000441443 TMCO1Q9UM00 188 aa21.16■□□□□ 0.98
SHOX2-203ENST00000441443 CNTNAP1P78357 1384 aa21.16■□□□□ 0.98
SHOX2-203ENST00000441443 I3L4J1 428 aa21.16■□□□□ 0.98
SHOX2-203ENST00000441443 INHBAP08476 426 aa21.16■□□□□ 0.98
SHOX2-203ENST00000441443 PEX2P28328 305 aa21.16■□□□□ 0.98
SHOX2-203ENST00000441443 HIRAP54198 1017 aaPredicted RBP21.16■□□□□ 0.98
SHOX2-203ENST00000441443 ZNF252P-AS1Q0IIN9 211 aa21.16■□□□□ 0.98
SHOX2-203ENST00000441443 DNAL1Q4LDG9 190 aa21.16■□□□□ 0.98
SHOX2-203ENST00000441443 TMCO4Q5TGY1 634 aa21.16■□□□□ 0.98
SHOX2-203ENST00000441443 FAM91A1Q658Y4 838 aa21.16■□□□□ 0.98
SHOX2-203ENST00000441443 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.16■□□□□ 0.98
SHOX2-203ENST00000441443 ZNF516Q92618 1163 aa21.16■□□□□ 0.98
SHOX2-203ENST00000441443 RAVER2Q9HCJ3 691 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms