RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 CSGALNACT1Q8TDX6 532 aa14.6□□□□□ -0.07
LTBR-202ENST00000440421 USP13Q92995 863 aaPredicted RBP14.6□□□□□ -0.07
LTBR-202ENST00000440421 TWNKQ96RR1 684 aa14.6□□□□□ -0.07
LTBR-202ENST00000440421 CYP2S1Q96SQ9 504 aa14.6□□□□□ -0.07
LTBR-202ENST00000440421 KCNK16Q96T55 309 aa14.6□□□□□ -0.07
LTBR-202ENST00000440421 DDX23Q9BUQ8 820 aaKnown RBP14.6□□□□□ -0.07
LTBR-202ENST00000440421 CYP3A43Q9HB55 503 aa14.6□□□□□ -0.07
LTBR-202ENST00000440421 LTB4R2Q9NPC1 389 aa14.6□□□□□ -0.07
LTBR-202ENST00000440421 KRT82Q9NSB4 513 aa14.6□□□□□ -0.07
LTBR-202ENST00000440421 RAB20Q9NX57 234 aa14.6□□□□□ -0.07
LTBR-202ENST00000440421 OBP2AQ9NY56 170 aa14.6□□□□□ -0.07
LTBR-202ENST00000440421 ZMYM5Q9UJ78 669 aa14.6□□□□□ -0.07
LTBR-202ENST00000440421 COL4A2P08572 1712 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 TRAV19A0A0A6YYK7 116 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 BICDL2A1A5D9 508 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 C2orf78A6NCI8 922 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 FAM170BA6NMN3 283 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 ARNTLO00327 626 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 ABL1P00519 1130 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 CKMP06732 381 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 TARSP26639 723 aaKnown RBP14.59□□□□□ -0.07
LTBR-202ENST00000440421 ADORA2BP29275 332 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 INCA1Q0VD86 236 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 ARHGAP29Q52LW3 1261 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 WDR44Q5JSH3 913 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 ZNF852Q6ZMS4 543 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 ARL14EPQ8N8R7 260 aaPredicted RBP14.59□□□□□ -0.07
LTBR-202ENST00000440421 SLC2A14Q8TDB8 520 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 TATDN2Q93075 761 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 SLC35C1Q96A29 364 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 SMARCD1Q96GM5 515 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 CEP295NLQ96MC4 621 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 CEP63Q96MT8 703 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 SLC22A12Q96S37 553 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 TRPV5Q9NQA5 729 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 TDP1Q9NUW8 608 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 FAM86C1Q9NVL1 165 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 TRPM5Q9NZQ8 1165 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 KIAA1468Q9P260 1216 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 NDRG2Q9UN36 371 aaKnown RBP14.59□□□□□ -0.07
LTBR-202ENST00000440421 PIAS3Q9Y6X2 628 aa14.59□□□□□ -0.07
LTBR-202ENST00000440421 ZNF638Q14966 1978 aaKnown RBP14.58□□□□□ -0.07
LTBR-202ENST00000440421 SHISA7A6NL88 538 aa14.58□□□□□ -0.08
LTBR-202ENST00000440421 AP1G2O75843 785 aa14.58□□□□□ -0.08
LTBR-202ENST00000440421 USP17L7P0C7H9 530 aa14.58□□□□□ -0.08
LTBR-202ENST00000440421 GLULP15104 373 aa14.58□□□□□ -0.08
LTBR-202ENST00000440421 TRIM21P19474 475 aaKnown RBP14.58□□□□□ -0.08
LTBR-202ENST00000440421 SOX9P48436 509 aa14.58□□□□□ -0.08
LTBR-202ENST00000440421 KPNA1P52294 538 aaPredicted RBP14.58□□□□□ -0.08
LTBR-202ENST00000440421 TAF10Q12962 218 aa14.58□□□□□ -0.08
LTBR-202ENST00000440421 PAK1Q13153 545 aa14.58□□□□□ -0.08
LTBR-202ENST00000440421 ZNF394Q53GI3 561 aa14.58□□□□□ -0.08
LTBR-202ENST00000440421 FRMD5Q7Z6J6 570 aa14.58□□□□□ -0.08
LTBR-202ENST00000440421 FILIP1Q7Z7B0 1213 aa14.58□□□□□ -0.08
LTBR-202ENST00000440421 NUP93Q8N1F7 819 aa14.58□□□□□ -0.08
LTBR-202ENST00000440421 TRIML1Q8N9V2 468 aa14.58□□□□□ -0.08
LTBR-202ENST00000440421 WHAMMQ8TF30 809 aa14.58□□□□□ -0.08
LTBR-202ENST00000440421 ATOH1Q92858 354 aaPredicted RBP14.58□□□□□ -0.08
LTBR-202ENST00000440421 PHOX2BQ99453 314 aa14.58□□□□□ -0.08
LTBR-202ENST00000440421 ARID3AQ99856 593 aa14.58□□□□□ -0.08
LTBR-202ENST00000440421 TTLL2Q9BWV7 592 aa14.58□□□□□ -0.08
LTBR-202ENST00000440421 NT5C1AQ9BXI3 368 aa14.58□□□□□ -0.08
LTBR-202ENST00000440421 METTL14Q9HCE5 456 aaKnown RBP14.58□□□□□ -0.08
LTBR-202ENST00000440421 DMAP1Q9NPF5 467 aaPredicted RBP14.58□□□□□ -0.08
LTBR-202ENST00000440421 THG1LQ9NWX6 298 aaKnown RBP14.58□□□□□ -0.08
LTBR-202ENST00000440421 GTSE1Q9NYZ3 720 aa14.58□□□□□ -0.08
LTBR-202ENST00000440421 EHD2Q9NZN4 543 aa14.58□□□□□ -0.08
LTBR-202ENST00000440421 DLGAP2Q9P1A6 1054 aa14.58□□□□□ -0.08
LTBR-202ENST00000440421 MIA3Q5JRA6 1907 aa14.57□□□□□ -0.08
LTBR-202ENST00000440421 SOBPA7XYQ1 873 aa14.57□□□□□ -0.08
LTBR-202ENST00000440421 MAN2B1O00754 1011 aa14.57□□□□□ -0.08
LTBR-202ENST00000440421 CILPO75339 1184 aa14.57□□□□□ -0.08
LTBR-202ENST00000440421 BEST1O76090 585 aa14.57□□□□□ -0.08
LTBR-202ENST00000440421 HDCP19113 662 aa14.57□□□□□ -0.08
LTBR-202ENST00000440421 YWHAQP27348 245 aa14.57□□□□□ -0.08
LTBR-202ENST00000440421 MAP3K7CLP57077 242 aa14.57□□□□□ -0.08
LTBR-202ENST00000440421 TNK2Q07912 1038 aa14.57□□□□□ -0.08
LTBR-202ENST00000440421 LRMPQ12912 555 aa14.57□□□□□ -0.08
LTBR-202ENST00000440421 ANGPT1Q15389 498 aa14.57□□□□□ -0.08
LTBR-202ENST00000440421 SCAMP5Q8TAC9 235 aa14.57□□□□□ -0.08
LTBR-202ENST00000440421 RIN3Q8TB24 985 aa14.57□□□□□ -0.08
LTBR-202ENST00000440421 FAM3CQ92520 227 aa14.57□□□□□ -0.08
LTBR-202ENST00000440421 FBXO32Q969P5 355 aa14.57□□□□□ -0.08
LTBR-202ENST00000440421 JAKMIP2Q96AA8 810 aa14.57□□□□□ -0.08
LTBR-202ENST00000440421 SLITRK1Q96PX8 696 aa14.57□□□□□ -0.08
LTBR-202ENST00000440421 SMOQ99835 787 aa14.57□□□□□ -0.08
LTBR-202ENST00000440421 KIF9Q9HAQ2 790 aa14.57□□□□□ -0.08
LTBR-202ENST00000440421 GKN1Q9NS71 199 aa14.57□□□□□ -0.08
LTBR-202ENST00000440421 GCNT4Q9P109 453 aa14.57□□□□□ -0.08
LTBR-202ENST00000440421 MRPS17Q9Y2R5 130 aaKnown RBP14.57□□□□□ -0.08
LTBR-202ENST00000440421 ANAPC1Q9H1A4 1944 aa14.56□□□□□ -0.08
LTBR-202ENST00000440421 ZNF840PA6NDX5 716 aa14.56□□□□□ -0.08
LTBR-202ENST00000440421 RTN3O95197 1032 aaPredicted RBP14.56□□□□□ -0.08
LTBR-202ENST00000440421 FAM200BP0CF97 657 aa14.56□□□□□ -0.08
LTBR-202ENST00000440421 FMO5P49326 533 aa14.56□□□□□ -0.08
LTBR-202ENST00000440421 SLC5A3P53794 718 aa14.56□□□□□ -0.08
LTBR-202ENST00000440421 PLCB2Q00722 1185 aa14.56□□□□□ -0.08
LTBR-202ENST00000440421 TRIM68Q6AZZ1 485 aa14.56□□□□□ -0.08
LTBR-202ENST00000440421 CC2D1AQ6P1N0 951 aaPredicted RBP14.56□□□□□ -0.08
LTBR-202ENST00000440421 ZMIZ2Q8NF64 920 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms