RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 STK25O00506 426 aa25.1■■□□□ 1.61
VARS-217ENST00000440048 DPYSL4O14531 572 aa25.1■■□□□ 1.61
VARS-217ENST00000440048 MLF2Q15773 248 aaPredicted RBP25.1■■□□□ 1.61
VARS-217ENST00000440048 TRIM59Q8IWR1 403 aa25.1■■□□□ 1.61
VARS-217ENST00000440048 SLC2A14Q8TDB8 520 aa25.1■■□□□ 1.61
VARS-217ENST00000440048 DNASE1L2Q92874 299 aa25.1■■□□□ 1.61
VARS-217ENST00000440048 MED15Q96RN5 788 aa25.1■■□□□ 1.61
VARS-217ENST00000440048 KCNK16Q96T55 309 aa25.1■■□□□ 1.61
VARS-217ENST00000440048 ARID3AQ99856 593 aa25.1■■□□□ 1.61
VARS-217ENST00000440048 OBP2AQ9NY56 170 aa25.1■■□□□ 1.61
VARS-217ENST00000440048 EHD2Q9NZN4 543 aa25.1■■□□□ 1.61
VARS-217ENST00000440048 COL4A3Q01955 1670 aa25.1■■□□□ 1.61
VARS-217ENST00000440048 TICRRQ7Z2Z1 1910 aa25.1■■□□□ 1.61
VARS-217ENST00000440048 PMM2O15305 246 aa25.09■■□□□ 1.61
VARS-217ENST00000440048 PI15O43692 258 aa25.09■■□□□ 1.61
VARS-217ENST00000440048 AP1G2O75843 785 aa25.09■■□□□ 1.61
VARS-217ENST00000440048 FGFR1OPO95684 399 aaKnown RBP25.09■■□□□ 1.61
VARS-217ENST00000440048 TRIM21P19474 475 aaKnown RBP25.09■■□□□ 1.61
VARS-217ENST00000440048 AOC1P19801 751 aa25.09■■□□□ 1.61
VARS-217ENST00000440048 RFX1P22670 979 aa25.09■■□□□ 1.61
VARS-217ENST00000440048 AVPR1AP37288 418 aa25.09■■□□□ 1.61
VARS-217ENST00000440048 MARSP56192 900 aaKnown RBP25.09■■□□□ 1.61
VARS-217ENST00000440048 STARD6P59095 220 aa25.09■■□□□ 1.61
VARS-217ENST00000440048 NHLH1Q02575 133 aa25.09■■□□□ 1.61
VARS-217ENST00000440048 PHLDB3Q6NSJ2 640 aa25.09■■□□□ 1.61
VARS-217ENST00000440048 YAF2Q8IY57 180 aa25.09■■□□□ 1.61
VARS-217ENST00000440048 GPT2Q8TD30 523 aa25.09■■□□□ 1.61
VARS-217ENST00000440048 IRF7Q92985 503 aa25.09■■□□□ 1.61
VARS-217ENST00000440048 SHDQ96IW2 340 aa25.09■■□□□ 1.61
VARS-217ENST00000440048 DMAP1Q9NPF5 467 aaPredicted RBP25.09■■□□□ 1.61
VARS-217ENST00000440048 KRT82Q9NSB4 513 aa25.09■■□□□ 1.61
VARS-217ENST00000440048 CISHQ9NSE2 258 aa25.09■■□□□ 1.61
VARS-217ENST00000440048 COL4A2P08572 1712 aa25.09■■□□□ 1.61
VARS-217ENST00000440048 ZNF263O14978 683 aa25.08■■□□□ 1.61
VARS-217ENST00000440048 HOXD11P31277 338 aaPredicted RBP25.08■■□□□ 1.61
VARS-217ENST00000440048 PRKCQQ04759 706 aa25.08■■□□□ 1.61
VARS-217ENST00000440048 FCHO2Q0JRZ9 810 aa25.08■■□□□ 1.61
VARS-217ENST00000440048 NUP93Q8N1F7 819 aa25.08■■□□□ 1.61
VARS-217ENST00000440048 TTC39CQ8N584 583 aa25.08■■□□□ 1.61
VARS-217ENST00000440048 CELF5Q8N6W0 485 aaKnown RBP25.08■■□□□ 1.61
VARS-217ENST00000440048 SMOQ99835 787 aa25.08■■□□□ 1.61
VARS-217ENST00000440048 TRPC7Q9HCX4 862 aa25.08■■□□□ 1.61
VARS-217ENST00000440048 F5P12259 2224 aa25.08■■□□□ 1.6
VARS-217ENST00000440048 ADORA2BP29275 332 aa25.07■■□□□ 1.6
VARS-217ENST00000440048 ZNF394Q53GI3 561 aa25.07■■□□□ 1.6
VARS-217ENST00000440048 ZMIZ2Q8NF64 920 aa25.07■■□□□ 1.6
VARS-217ENST00000440048 PRSS33Q8NF86 280 aa25.07■■□□□ 1.6
VARS-217ENST00000440048 BPIFB1Q8TDL5 484 aa25.07■■□□□ 1.6
VARS-217ENST00000440048 USP13Q92995 863 aaPredicted RBP25.07■■□□□ 1.6
VARS-217ENST00000440048 CYFIP2Q96F07 1278 aa25.07■■□□□ 1.6
VARS-217ENST00000440048 SLC22A12Q96S37 553 aa25.07■■□□□ 1.6
VARS-217ENST00000440048 HNRNPABQ99729 332 aaKnown RBP25.07■■□□□ 1.6
VARS-217ENST00000440048 DNAI2Q9GZS0 605 aa25.07■■□□□ 1.6
VARS-217ENST00000440048 CSNK1G1Q9HCP0 422 aa25.07■■□□□ 1.6
VARS-217ENST00000440048 TRPV5Q9NQA5 729 aa25.07■■□□□ 1.6
VARS-217ENST00000440048 HEBP1Q9NRV9 189 aa25.07■■□□□ 1.6
VARS-217ENST00000440048 TDP1Q9NUW8 608 aa25.07■■□□□ 1.6
VARS-217ENST00000440048 TRPM5Q9NZQ8 1165 aa25.07■■□□□ 1.6
VARS-217ENST00000440048 CCL26Q9Y258 94 aa25.07■■□□□ 1.6
VARS-217ENST00000440048 C2orf78A6NCI8 922 aa25.06■■□□□ 1.6
VARS-217ENST00000440048 GOLGA6L22H0YM25 854 aa25.06■■□□□ 1.6
VARS-217ENST00000440048 ARNTLO00327 626 aa25.06■■□□□ 1.6
VARS-217ENST00000440048 TNFRSF10BO14763 440 aa25.06■■□□□ 1.6
VARS-217ENST00000440048 CHADO15335 359 aa25.06■■□□□ 1.6
VARS-217ENST00000440048 BEST1O76090 585 aa25.06■■□□□ 1.6
VARS-217ENST00000440048 RTN3O95197 1032 aaPredicted RBP25.06■■□□□ 1.6
VARS-217ENST00000440048 CCDC192P0DO97 292 aa25.06■■□□□ 1.6
VARS-217ENST00000440048 KCNH2Q12809 1159 aa25.06■■□□□ 1.6
VARS-217ENST00000440048 IFRD2Q12894 506 aaPredicted RBP25.06■■□□□ 1.6
VARS-217ENST00000440048 LRMPQ12912 555 aa25.06■■□□□ 1.6
VARS-217ENST00000440048 TAF10Q12962 218 aa25.06■■□□□ 1.6
VARS-217ENST00000440048 CUL2Q13617 745 aa25.06■■□□□ 1.6
VARS-217ENST00000440048 DPCR1Q3MIW9 517 aa25.06■■□□□ 1.6
VARS-217ENST00000440048 CYP2S1Q96SQ9 504 aa25.06■■□□□ 1.6
VARS-217ENST00000440048 DDX23Q9BUQ8 820 aaKnown RBP25.06■■□□□ 1.6
VARS-217ENST00000440048 FOXQ1Q9C009 403 aa25.06■■□□□ 1.6
VARS-217ENST00000440048 FAM124BQ9H5Z6 455 aaPredicted RBP25.06■■□□□ 1.6
VARS-217ENST00000440048 GCNT4Q9P109 453 aa25.06■■□□□ 1.6
VARS-217ENST00000440048 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.06■■□□□ 1.6
VARS-217ENST00000440048 PATJQ8NI35 1801 aa25.05■■□□□ 1.6
VARS-217ENST00000440048 KIF26AQ9ULI4 1882 aaPredicted RBP25.05■■□□□ 1.6
VARS-217ENST00000440048 TRAV19A0A0A6YYK7 116 aa25.05■■□□□ 1.6
VARS-217ENST00000440048 P4HA2O15460 535 aa25.05■■□□□ 1.6
VARS-217ENST00000440048 FAM200BP0CF97 657 aa25.05■■□□□ 1.6
VARS-217ENST00000440048 YWHAQP27348 245 aa25.05■■□□□ 1.6
VARS-217ENST00000440048 RAD23BP54727 409 aa25.05■■□□□ 1.6
VARS-217ENST00000440048 MAP3K7CLP57077 242 aa25.05■■□□□ 1.6
VARS-217ENST00000440048 ZNF268Q14587 947 aaPredicted RBP25.05■■□□□ 1.6
VARS-217ENST00000440048 ARHGAP29Q52LW3 1261 aa25.05■■□□□ 1.6
VARS-217ENST00000440048 TPRG1Q6ZUI0 275 aa25.05■■□□□ 1.6
VARS-217ENST00000440048 SLC4A11Q8NBS3 891 aa25.05■■□□□ 1.6
VARS-217ENST00000440048 SCAMP5Q8TAC9 235 aa25.05■■□□□ 1.6
VARS-217ENST00000440048 ZFYVE19Q96K21 471 aa25.05■■□□□ 1.6
VARS-217ENST00000440048 HEXIM2Q96MH2 286 aaKnown RBP25.05■■□□□ 1.6
VARS-217ENST00000440048 MIA3Q5JRA6 1907 aa25.05■■□□□ 1.6
VARS-217ENST00000440048 KANSL1LA0AUZ9 987 aa25.04■■□□□ 1.6
VARS-217ENST00000440048 ZNF840PA6NDX5 716 aa25.04■■□□□ 1.6
VARS-217ENST00000440048 GALR2O43603 387 aaPredicted RBP25.04■■□□□ 1.6
VARS-217ENST00000440048 AFPP02771 609 aaKnown RBP25.04■■□□□ 1.6
VARS-217ENST00000440048 CKMP06732 381 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms