RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 PROCP04070 461 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 WEE2P0C1S8 567 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 MUTP22033 750 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 BST1Q10588 318 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 MSS51Q4VC12 460 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 SFT2D3Q587I9 215 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 MROH9Q5TGP6 573 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 CASC4Q6P4E1 433 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 SV2AQ7L0J3 742 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 HSPH1Q92598 858 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 MRPL47Q9HD33 250 aaKnown RBP12.19□□□□□ -0.46
SMPD4-209ENST00000439886 SEL1LQ9UBV2 794 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 DENND3A2RUS2 1198 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 CAPN8A6NHC0 703 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 MAGEB3O15480 346 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 LIASO43766 372 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 TYROBPO43914 113 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 PEX1O43933 1283 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 CST8O60676 142 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 CLPTM1O96005 669 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 POLR2MP0CAP2 368 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 RARBP10826 455 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 CD19P15391 556 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 SHMT1P34896 483 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 MTTPP55157 894 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 PSMC1P62191 440 aaKnown RBP12.19□□□□□ -0.46
SMPD4-209ENST00000439886 PDK3Q15120 406 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 TRMT5Q32P41 509 aaKnown RBP12.19□□□□□ -0.46
SMPD4-209ENST00000439886 CYP4A22Q5TCH4 519 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 KRT27Q7Z3Y8 459 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 POLNQ7Z5Q5 900 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 ZNF554Q86TJ5 538 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.19□□□□□ -0.46
SMPD4-209ENST00000439886 SHC3Q92529 594 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 LENG9Q96B70 501 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 PPP1R14BQ96C90 147 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 PTCD3Q96EY7 689 aaKnown RBP12.19□□□□□ -0.46
SMPD4-209ENST00000439886 SH3GL1Q99961 368 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 KLHL4Q9C0H6 718 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 WWP1Q9H0M0 922 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 GMEB1Q9Y692 573 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 COMMD3-BMI1R4GMX3 469 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 SLIT2O94813 1529 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 SIGLEC16A6NMB1 481 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 A8MXQ7 604 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 H7C0C1 242 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 XPO1O14980 1071 aaKnown RBP12.19□□□□□ -0.46
SMPD4-209ENST00000439886 TCEA3O75764 348 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 RAG1P15918 1043 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 GNA15P30679 374 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 ELK3P41970 407 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 ATP5OP48047 213 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 HADHBP55084 474 aaKnown RBP12.19□□□□□ -0.46
SMPD4-209ENST00000439886 GPX6P59796 221 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 CNGA3Q16281 694 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 FXNQ16595 210 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 CTC1Q2NKJ3 1217 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 KCTD21Q4G0X4 260 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 DNAJC24Q6P3W2 148 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.19□□□□□ -0.46
SMPD4-209ENST00000439886 CCDC33Q8N5R6 958 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 SERAC1Q96JX3 654 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 MMP19Q99542 508 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 HSD17B14Q9BPX1 270 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 AASDHPPTQ9NRN7 309 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 TUBA8Q9NY65 449 aaPredicted RBP12.19□□□□□ -0.46
SMPD4-209ENST00000439886 TAGLN3Q9UI15 199 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 SLC24A2Q9UI40 661 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 GLI3P10071 1580 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 SPDYE16A6NNV3 312 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-209ENST00000439886 TBX3O15119 743 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 TIMM44O43615 452 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 NDUFB10O96000 172 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 PENKP01210 267 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-209ENST00000439886 ACOT2P49753 483 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 PLOD1Q02809 727 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-209ENST00000439886 GSTA3Q16772 222 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 EFHC1Q5JVL4 640 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 TXNRD3NBQ6F5E7 133 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 ZBTB46Q86UZ6 589 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 ACTL9Q8TC94 416 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 PRPF18Q99633 342 aaKnown RBP12.18□□□□□ -0.46
SMPD4-209ENST00000439886 EBF4Q9BQW3 602 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 TRIM56Q9BRZ2 755 aaKnown RBP12.18□□□□□ -0.46
SMPD4-209ENST00000439886 ZC3H12CQ9C0D7 883 aaKnown RBP12.18□□□□□ -0.46
SMPD4-209ENST00000439886 DMAC2Q9NW81 257 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 MKS1Q9NXB0 559 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 USP54Q70EL1 1684 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 NOP56O00567 594 aaKnown RBP12.18□□□□□ -0.46
SMPD4-209ENST00000439886 DGKIO75912 1065 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 TCN1P20061 433 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-209ENST00000439886 SREBF1P36956 1147 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 ADARP55265 1226 aaKnown RBP12.18□□□□□ -0.46
SMPD4-209ENST00000439886 PSMC5P62195 406 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 OTUD4Q01804 1114 aaKnown RBP12.18□□□□□ -0.46
SMPD4-209ENST00000439886 SEZ6Q53EL9 994 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 C16orf46Q6P387 395 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 DARS2Q6PI48 645 aaKnown RBP12.18□□□□□ -0.46
SMPD4-209ENST00000439886 SCARA5Q6ZMJ2 495 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 LENG1Q96BZ8 264 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms