RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 TRIM66O15016 1216 aa21.85■■□□□ 1.09
CHD3-204ENST00000439235 TEX28O15482 410 aa21.85■■□□□ 1.09
CHD3-204ENST00000439235 DNAJB1P25685 340 aa21.85■■□□□ 1.09
CHD3-204ENST00000439235 MAP3K7CLP57077 242 aa21.85■■□□□ 1.09
CHD3-204ENST00000439235 KIF5AQ12840 1032 aa21.85■■□□□ 1.09
CHD3-204ENST00000439235 ZNF461Q8TAF7 563 aa21.85■■□□□ 1.09
CHD3-204ENST00000439235 MICAL1Q8TDZ2 1067 aa21.85■■□□□ 1.09
CHD3-204ENST00000439235 ARNTL2Q8WYA1 636 aa21.85■■□□□ 1.09
CHD3-204ENST00000439235 SLC4A5Q9BY07 1137 aa21.85■■□□□ 1.09
CHD3-204ENST00000439235 PACSIN1Q9BY11 444 aa21.85■■□□□ 1.09
CHD3-204ENST00000439235 RHOBTB2Q9BYZ6 727 aa21.85■■□□□ 1.09
CHD3-204ENST00000439235 ST7Q9NRC1 585 aa21.85■■□□□ 1.09
CHD3-204ENST00000439235 KCND1Q9NSA2 647 aa21.85■■□□□ 1.09
CHD3-204ENST00000439235 HSFX1Q9UBD0 423 aa21.85■■□□□ 1.09
CHD3-204ENST00000439235 FAM170AA1A519 330 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 PJA2O43164 708 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 KRT86O43790 486 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 ABLIM3O94929 683 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 CNPP09543 421 aaKnown RBP21.84■■□□□ 1.09
CHD3-204ENST00000439235 CYP2F1P24903 491 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 GRIK1P39086 918 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 RGS7P49802 495 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 CDR1P51861 262 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 GPC5P78333 572 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 PMF1Q6P1K2 205 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 ZNF662Q6ZS27 426 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 PIGZQ86VD9 579 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 DNAAF5Q86Y56 855 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 SCN4BQ8IWT1 228 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 CCAR2Q8N163 923 aaKnown RBP21.84■■□□□ 1.09
CHD3-204ENST00000439235 MRPL43Q8N983 215 aaKnown RBP21.84■■□□□ 1.09
CHD3-204ENST00000439235 ATAD1Q8NBU5 361 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 KCTD13Q8WZ19 329 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 C18orf8Q96DM3 657 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 KLHL5Q96PQ7 755 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 CPXM1Q96SM3 734 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 THAP2Q9H0W7 228 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 CERS4Q9HA82 394 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 LRRC4Q9HBW1 653 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.84■■□□□ 1.09
CHD3-204ENST00000439235 WDR35Q9P2L0 1181 aa21.84■■□□□ 1.09
CHD3-204ENST00000439235 C2orf71A6NGG8 1288 aa21.83■■□□□ 1.09
CHD3-204ENST00000439235 TULP2O00295 520 aa21.83■■□□□ 1.09
CHD3-204ENST00000439235 BEST1O76090 585 aa21.83■■□□□ 1.09
CHD3-204ENST00000439235 HAPLN1P10915 354 aaPredicted RBP21.83■■□□□ 1.09
CHD3-204ENST00000439235 ATF2P15336 505 aa21.83■■□□□ 1.09
CHD3-204ENST00000439235 MSNP26038 577 aaKnown RBP21.83■■□□□ 1.09
CHD3-204ENST00000439235 GABRB2P47870 512 aa21.83■■□□□ 1.09
CHD3-204ENST00000439235 RPL34P49207 117 aaKnown RBP21.83■■□□□ 1.09
CHD3-204ENST00000439235 TUFMP49411 452 aaKnown RBP21.83■■□□□ 1.09
CHD3-204ENST00000439235 CACNA2D1P54289 1103 aa21.83■■□□□ 1.09
CHD3-204ENST00000439235 GSCP56915 257 aaPredicted RBP21.83■■□□□ 1.09
CHD3-204ENST00000439235 RPL10AP62906 217 aaKnown RBP21.83■■□□□ 1.09
CHD3-204ENST00000439235 ADCY1Q08828 1119 aa21.83■■□□□ 1.09
CHD3-204ENST00000439235 PTP4A2Q12974 167 aa21.83■■□□□ 1.09
CHD3-204ENST00000439235 LRIT3Q3SXY7 679 aa21.83■■□□□ 1.09
CHD3-204ENST00000439235 MGAT5BQ3V5L5 792 aa21.83■■□□□ 1.09
CHD3-204ENST00000439235 ARHGAP29Q52LW3 1261 aa21.83■■□□□ 1.09
CHD3-204ENST00000439235 TMEM110Q86TL2 294 aa21.83■■□□□ 1.09
CHD3-204ENST00000439235 ZMIZ2Q8NF64 920 aa21.83■■□□□ 1.09
CHD3-204ENST00000439235 C8orf48Q96LL4 319 aa21.83■■□□□ 1.09
CHD3-204ENST00000439235 SEPT5Q99719 369 aaPredicted RBP21.83■■□□□ 1.09
CHD3-204ENST00000439235 AVENQ9NQS1 362 aaPredicted RBP21.83■■□□□ 1.09
CHD3-204ENST00000439235 CNOT8Q9UFF9 292 aaKnown RBP21.83■■□□□ 1.09
CHD3-204ENST00000439235 NCANO14594 1321 aa21.82■■□□□ 1.08
CHD3-204ENST00000439235 BTNL10A8MVZ5 291 aa21.82■■□□□ 1.08
CHD3-204ENST00000439235 E5RJQ4 531 aa21.82■■□□□ 1.08
CHD3-204ENST00000439235 F8VP50 259 aa21.82■■□□□ 1.08
CHD3-204ENST00000439235 CSPG5O95196 566 aa21.82■■□□□ 1.08
CHD3-204ENST00000439235 VNN2O95498 520 aa21.82■■□□□ 1.08
CHD3-204ENST00000439235 ERBB2P04626 1255 aa21.82■■□□□ 1.08
CHD3-204ENST00000439235 KLRC2P26717 231 aa21.82■■□□□ 1.08
CHD3-204ENST00000439235 ELF1P32519 619 aa21.82■■□□□ 1.08
CHD3-204ENST00000439235 DUSP4Q13115 394 aa21.82■■□□□ 1.08
CHD3-204ENST00000439235 ZDHHC17Q8IUH5 632 aa21.82■■□□□ 1.08
CHD3-204ENST00000439235 RHOT2Q8IXI1 618 aa21.82■■□□□ 1.08
CHD3-204ENST00000439235 RFFLQ8WZ73 363 aa21.82■■□□□ 1.08
CHD3-204ENST00000439235 CEP295NLQ96MC4 621 aa21.82■■□□□ 1.08
CHD3-204ENST00000439235 KCNK16Q96T55 309 aa21.82■■□□□ 1.08
CHD3-204ENST00000439235 TMEM30AQ9NV96 361 aa21.82■■□□□ 1.08
CHD3-204ENST00000439235 TRMT1Q9NXH9 659 aaKnown RBP21.82■■□□□ 1.08
CHD3-204ENST00000439235 SCINQ9Y6U3 715 aa21.82■■□□□ 1.08
CHD3-204ENST00000439235 A0A0A6YYK5 440 aaPredicted RBP21.81■■□□□ 1.08
CHD3-204ENST00000439235 CYP1A2P05177 515 aa21.81■■□□□ 1.08
CHD3-204ENST00000439235 RRM1P23921 792 aa21.81■■□□□ 1.08
CHD3-204ENST00000439235 CAMK1Q14012 370 aa21.81■■□□□ 1.08
CHD3-204ENST00000439235 ZNF268Q14587 947 aaPredicted RBP21.81■■□□□ 1.08
CHD3-204ENST00000439235 CYP4A22Q5TCH4 519 aa21.81■■□□□ 1.08
CHD3-204ENST00000439235 SIX6OS1Q8N1H7 587 aa21.81■■□□□ 1.08
CHD3-204ENST00000439235 TTC9BQ8N6N2 239 aa21.81■■□□□ 1.08
CHD3-204ENST00000439235 GDPD5Q8WTR4 605 aa21.81■■□□□ 1.08
CHD3-204ENST00000439235 LACRTQ9GZZ8 138 aa21.81■■□□□ 1.08
CHD3-204ENST00000439235 CYP4F11Q9HBI6 524 aa21.81■■□□□ 1.08
CHD3-204ENST00000439235 MYO1AQ9UBC5 1043 aa21.81■■□□□ 1.08
CHD3-204ENST00000439235 RCCD1A6NED2 376 aa21.8■■□□□ 1.08
CHD3-204ENST00000439235 HIDE1A8MVS5 230 aa21.8■■□□□ 1.08
CHD3-204ENST00000439235 HHLA1C9JL84 531 aa21.8■■□□□ 1.08
CHD3-204ENST00000439235 FBXO21O94952 628 aa21.8■■□□□ 1.08
CHD3-204ENST00000439235 C1RP00736 705 aa21.8■■□□□ 1.08
CHD3-204ENST00000439235 IRS1P35568 1242 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms