RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 PTF1AQ7RTS3 328 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 OVCH2Q7RTZ1 564 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 ZNF551Q7Z340 670 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 COL23A1Q86Y22 540 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 ATRIPQ8WXE1 791 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 DPF1Q92782 380 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 MTFMTQ96DP5 389 aaKnown RBP4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 MESP1Q9BRJ9 268 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 INO80BQ9C086 356 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 C1orf112Q9NSG2 853 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 PIH1D1Q9NWS0 290 aaKnown RBP4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 SH2B3Q9UQQ2 575 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 FAM50BQ9Y247 325 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 SHANK2Q9UPX8 1470 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 LRRC7Q96NW7 1537 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 SLC16A3O15427 465 aaKnown RBP4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 TLR5O60602 858 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 NXPH3O95157 252 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 ONECUT2O95948 504 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 GRPP07492 148 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 PDHA1P08559 390 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 FAM163BP0C2L3 166 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 CYP2C9P11712 490 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 DRD4P21917 467 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 GNALP38405 381 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 PXNP49023 591 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 SLC11A2P49281 568 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 WNT3P56703 355 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 GPSM2P81274 684 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 SP2Q02086 613 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 ANO6Q4KMQ2 910 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 ZNF618Q5T7W0 954 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 TEDDM1Q5T9Z0 273 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 FCRLBQ6BAA4 426 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 ANKRD16Q6P6B7 361 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 CCDC149Q6ZUS6 474 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 WDR53Q7Z5U6 358 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 DAAM2Q86T65 1068 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 DGKHQ86XP1 1220 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 RASAL3Q86YV0 1011 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 KBTBD7Q8WVZ9 684 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 REPS1Q96D71 796 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 NT5C1BQ96P26 610 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 MOGAT1Q96PD6 335 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 B3GNT5Q9BYG0 378 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 TRIM54Q9BYV2 358 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 TTYH3Q9C0H2 523 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 PRDM11Q9NQV5 511 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 ARHGEF3Q9NR81 526 aa4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 NDRG4Q9ULP0 352 aaKnown RBP4.11□□□□□ -1.75
HMGB3P12-201ENST00000438745 A0A087WWL8 130 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 ZNF213O14771 459 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 IL6RP08887 468 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 KCNJ5P48544 419 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 ALDH9A1P49189 494 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 CCT8P50990 548 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 ATXN1P54253 815 aaKnown RBP4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 UCP3P55916 312 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 LILRA4P59901 499 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 ZKSCAN2Q63HK3 967 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 NPNTQ6UXI9 565 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 MAVSQ7Z434 540 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 GAS2L3Q86XJ1 694 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 CCDC146Q8IYE0 955 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 FAM156AQ8NDB6 213 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 SEMA6DQ8NFY4 1073 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 HASPINQ8TF76 798 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 ATP6V0A4Q9HBG4 840 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 GEMIN8Q9NWZ8 242 aaKnown RBP4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 DLL3Q9NYJ7 618 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 CPA4Q9UI42 421 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 TMX2Q9Y320 296 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 WNT6Q9Y6F9 365 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 FHOD3Q2V2M9 1422 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 C9orf84Q5VXU9 1444 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 PLA2R1Q13018 1463 aa4.1□□□□□ -1.75
HMGB3P12-201ENST00000438745 TARM1B6A8C7 271 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 CAND2O75155 1236 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 TJP3O95049 919 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 LATS1O95835 1130 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 ERBB2P04626 1255 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 PRKCGP05129 697 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 KRT18P05783 430 aaKnown RBP4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 CSF1RP07333 972 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 XRCC6P12956 609 aaKnown RBP eCLIP4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 NPR1P16066 1061 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 LRPAP1P30533 357 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 LIPAP38571 399 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 C1QTNF8P60827 252 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 CTBP1Q13363 440 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 E2F2Q14209 437 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 GALEQ14376 348 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 GBX1Q14549 363 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 KIAA0753Q2KHM9 967 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 FAM153CQ494X1 144 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 AARS2Q5JTZ9 985 aaKnown RBP4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 ARHGAP40Q5TG30 622 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 LAYNQ6UX15 382 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms