RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 GCLMP48507 274 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 TUFMP49411 452 aaKnown RBP9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 VAMP7P51809 220 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 SMARCB1Q12824 385 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 TRPC3Q13507 836 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 NFE2Q16621 373 aaPredicted RBP9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 ZNF699Q32M78 642 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 EDRF1Q3B7T1 1238 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 CFAP221Q4G0U5 840 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 COBLL1Q53SF7 1204 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 MDH1BQ5I0G3 518 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 FAM186BQ8IYM0 893 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 RGL4Q8IZJ4 473 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 LEMD2Q8NC56 503 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 ARMC2Q8NEN0 867 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 FLCNQ8NFG4 579 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 RIN3Q8TB24 985 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 TAS1R2Q8TE23 839 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 SMARCD2Q92925 531 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 SYAP1Q96A49 352 aaPredicted RBP9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 ELSPBP1Q96BH3 223 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 PCED1BQ96HM7 432 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 GSDMAQ96QA5 445 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 FOXQ1Q9C009 403 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 TBC1D17Q9HA65 648 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 TRPV4Q9HBA0 871 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 APOBEC3GQ9HC16 384 aaKnown RBP9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 ABCB6Q9NP58 842 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 ARHGEF3Q9NR81 526 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 CHMP5Q9NZZ3 219 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 NXF1Q9UBU9 619 aaKnown RBP9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 MAN1B1Q9UKM7 699 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 CDH9Q9ULB4 789 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 MYO18AQ92614 2054 aaKnown RBP9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 SLC38A8A6NNN8 435 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 HEPACAM2A8MVW5 462 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 ARNTLO00327 626 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 CLDN5O00501 218 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 IKBKBO14920 756 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 PHACTR2O75167 634 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 NOL4O94818 638 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 ASS1P00966 412 aaKnown RBP9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 GLULP15104 373 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 AOC1P19801 751 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 CD72P21854 359 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 ATICP31939 592 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 CTHP32929 405 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 GNL1P36915 607 aaPredicted RBP9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 PLA2G5P39877 138 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 MAGEA11P43364 429 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 ASPAP45381 313 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 NLRP12P59046 1061 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 TNNC1P63316 161 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 NHLH1Q02575 133 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 ORC1Q13415 861 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 ADAM9Q13443 819 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 VEPH1Q14D04 833 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 ZNF667Q5HYK9 610 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 GPR158Q5T848 1215 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 ANKRD40Q6AI12 368 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 PAQR9Q6ZVX9 377 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 ITIH5Q86UX2 942 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 ARID3BQ8IVW6 561 aaPredicted RBP9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 SCN4BQ8IWT1 228 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 ADSSL1Q8N142 457 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 OR6B3Q8NGW1 331 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 MYCBPAPQ8TBZ2 947 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 SEMA4DQ92854 862 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 SMARCE1Q969G3 411 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 FUBP3Q96I24 572 aaKnown RBP eCLIP9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 TWNKQ96RR1 684 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 SLC22A12Q96S37 553 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 DDX23Q9BUQ8 820 aaKnown RBP9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 SLC46A2Q9BY10 475 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 B3GNT5Q9BYG0 378 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 ZNF518BQ9C0D4 1074 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 SMG9Q9H0W8 520 aaKnown RBP9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 ATXN3LQ9H3M9 355 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 MFSD1Q9H3U5 465 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 SLITRK6Q9H5Y7 841 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 ZFP14Q9HCL3 533 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 DLGAP2Q9P1A6 1054 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 MAGED2Q9UNF1 606 aaPredicted RBP9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 FRMD4BQ9Y2L6 1034 aa9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 R3HCC1Q9Y3T6 440 aaKnown RBP9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 MTF2Q9Y483 593 aaPredicted RBP9.11□□□□□ -0.95
HERPUD2-206ENST00000438224 GPR179Q6PRD1 2367 aa9.1□□□□□ -0.95
HERPUD2-206ENST00000438224 EP300Q09472 2414 aaPredicted RBP9.1□□□□□ -0.95
HERPUD2-206ENST00000438224 F8VP50 259 aa9.1□□□□□ -0.95
HERPUD2-206ENST00000438224 BIN1O00499 593 aa9.1□□□□□ -0.95
HERPUD2-206ENST00000438224 SCAMP3O14828 347 aaKnown RBP9.1□□□□□ -0.95
HERPUD2-206ENST00000438224 KIF20AO95235 890 aa9.1□□□□□ -0.95
HERPUD2-206ENST00000438224 SMC2O95347 1197 aa9.1□□□□□ -0.95
HERPUD2-206ENST00000438224 CSH1P0DML2 217 aa9.1□□□□□ -0.95
HERPUD2-206ENST00000438224 CSH2P0DML3 217 aa9.1□□□□□ -0.95
HERPUD2-206ENST00000438224 JUNDP17535 347 aa9.1□□□□□ -0.95
HERPUD2-206ENST00000438224 PTPN1P18031 435 aaKnown RBP9.1□□□□□ -0.95
HERPUD2-206ENST00000438224 PSMC2P35998 433 aaKnown RBP9.1□□□□□ -0.95
HERPUD2-206ENST00000438224 PIK3CAP42336 1068 aa9.1□□□□□ -0.95
HERPUD2-206ENST00000438224 CLCN5P51795 746 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms