RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 PRAMEF12O95522 483 aa18.9■□□□□ 0.62
NCSTN-208ENST00000438008 CCDC130P13994 396 aa18.9■□□□□ 0.62
NCSTN-208ENST00000438008 AOC1P19801 751 aa18.9■□□□□ 0.62
NCSTN-208ENST00000438008 GDI1P31150 447 aa18.9■□□□□ 0.62
NCSTN-208ENST00000438008 AVPR1AP37288 418 aa18.9■□□□□ 0.62
NCSTN-208ENST00000438008 CETN1Q12798 172 aa18.9■□□□□ 0.62
NCSTN-208ENST00000438008 MLF2Q15773 248 aaPredicted RBP18.9■□□□□ 0.62
NCSTN-208ENST00000438008 IER5LQ5T953 404 aa18.9■□□□□ 0.62
NCSTN-208ENST00000438008 CELF5Q8N6W0 485 aaKnown RBP18.9■□□□□ 0.62
NCSTN-208ENST00000438008 FLCNQ8NFG4 579 aa18.9■□□□□ 0.62
NCSTN-208ENST00000438008 LRRC3BQ96PB8 259 aa18.9■□□□□ 0.62
NCSTN-208ENST00000438008 KCNK16Q96T55 309 aa18.9■□□□□ 0.62
NCSTN-208ENST00000438008 DDX23Q9BUQ8 820 aaKnown RBP18.9■□□□□ 0.62
NCSTN-208ENST00000438008 BRD9Q9H8M2 597 aa18.9■□□□□ 0.62
NCSTN-208ENST00000438008 TBC1D17Q9HA65 648 aa18.9■□□□□ 0.62
NCSTN-208ENST00000438008 COMMD8Q9NX08 183 aa18.9■□□□□ 0.62
NCSTN-208ENST00000438008 IL37Q9NZH6 218 aa18.9■□□□□ 0.62
NCSTN-208ENST00000438008 ARNTLO00327 626 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 TNFRSF10BO14763 440 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 ZNF263O14978 683 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 CHADO15335 359 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 AP1G2O75843 785 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 RTN3O95197 1032 aaPredicted RBP18.89■□□□□ 0.61
NCSTN-208ENST00000438008 PFKLP17858 780 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 KCNH2Q12809 1159 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 CUL2Q13617 745 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 ZNF268Q14587 947 aaPredicted RBP18.89■□□□□ 0.61
NCSTN-208ENST00000438008 GPIHBP1Q8IV16 184 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 YAF2Q8IY57 180 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 TMEM105Q8N8V8 129 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 ZMIZ2Q8NF64 920 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 LMO3Q8TAP4 145 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 BPIFB1Q8TDL5 484 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 USP13Q92995 863 aaPredicted RBP18.89■□□□□ 0.61
NCSTN-208ENST00000438008 CYFIP2Q96F07 1278 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 PRRX2Q99811 253 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 SMOQ99835 787 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 ARID3AQ99856 593 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 KIF9Q9HAQ2 790 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 KRT82Q9NSB4 513 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 FAM49BQ9NUQ9 324 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 TRPM5Q9NZQ8 1165 aa18.89■□□□□ 0.61
NCSTN-208ENST00000438008 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.89■□□□□ 0.61
NCSTN-208ENST00000438008 ZNF318Q5VUA4 2279 aa18.88■□□□□ 0.61
NCSTN-208ENST00000438008 AFPP02771 609 aaKnown RBP18.88■□□□□ 0.61
NCSTN-208ENST00000438008 TBXAS1P24557 533 aaPredicted RBP18.88■□□□□ 0.61
NCSTN-208ENST00000438008 YWHAQP27348 245 aa18.88■□□□□ 0.61
NCSTN-208ENST00000438008 ERCC5P28715 1186 aaPredicted RBP18.88■□□□□ 0.61
NCSTN-208ENST00000438008 RAD23BP54727 409 aa18.88■□□□□ 0.61
NCSTN-208ENST00000438008 DPCR1Q3MIW9 517 aa18.88■□□□□ 0.61
NCSTN-208ENST00000438008 ARHGAP29Q52LW3 1261 aa18.88■□□□□ 0.61
NCSTN-208ENST00000438008 CT47A1Q5JQC4 288 aaPredicted RBP18.88■□□□□ 0.61
NCSTN-208ENST00000438008 RBM43Q6ZSC3 357 aaKnown RBP18.88■□□□□ 0.61
NCSTN-208ENST00000438008 SLC4A11Q8NBS3 891 aa18.88■□□□□ 0.61
NCSTN-208ENST00000438008 OVCA2Q8WZ82 227 aa18.88■□□□□ 0.61
NCSTN-208ENST00000438008 TMEM176AQ96HP8 235 aa18.88■□□□□ 0.61
NCSTN-208ENST00000438008 SLITRK1Q96PX8 696 aa18.88■□□□□ 0.61
NCSTN-208ENST00000438008 SMG9Q9H0W8 520 aaKnown RBP18.88■□□□□ 0.61
NCSTN-208ENST00000438008 TDP1Q9NUW8 608 aa18.88■□□□□ 0.61
NCSTN-208ENST00000438008 GCNT4Q9P109 453 aa18.88■□□□□ 0.61
NCSTN-208ENST00000438008 DACH1Q9UI36 760 aa18.88■□□□□ 0.61
NCSTN-208ENST00000438008 ZDBF2Q9HCK1 2354 aa18.88■□□□□ 0.61
NCSTN-208ENST00000438008 TRAV19A0A0A6YYK7 116 aa18.87■□□□□ 0.61
NCSTN-208ENST00000438008 FAM92AA1XBS5 289 aa18.87■□□□□ 0.61
NCSTN-208ENST00000438008 ZNF840PA6NDX5 716 aa18.87■□□□□ 0.61
NCSTN-208ENST00000438008 PI15O43692 258 aa18.87■□□□□ 0.61
NCSTN-208ENST00000438008 BEST1O76090 585 aa18.87■□□□□ 0.61
NCSTN-208ENST00000438008 USP17L7P0C7H9 530 aa18.87■□□□□ 0.61
NCSTN-208ENST00000438008 FAM200BP0CF97 657 aa18.87■□□□□ 0.61
NCSTN-208ENST00000438008 PDE6CP51160 858 aa18.87■□□□□ 0.61
NCSTN-208ENST00000438008 SLC5A3P53794 718 aa18.87■□□□□ 0.61
NCSTN-208ENST00000438008 MLLT6P55198 1093 aaPredicted RBP18.87■□□□□ 0.61
NCSTN-208ENST00000438008 YWHAEP62258 255 aaKnown RBP18.87■□□□□ 0.61
NCSTN-208ENST00000438008 PLCB2Q00722 1185 aa18.87■□□□□ 0.61
NCSTN-208ENST00000438008 TAF10Q12962 218 aa18.87■□□□□ 0.61
NCSTN-208ENST00000438008 IRF2BP1Q8IU81 584 aa18.87■□□□□ 0.61
NCSTN-208ENST00000438008 UBR7Q8N806 425 aa18.87■□□□□ 0.61
NCSTN-208ENST00000438008 EHBP1Q8NDI1 1231 aa18.87■□□□□ 0.61
NCSTN-208ENST00000438008 HEXIM2Q96MH2 286 aaKnown RBP18.87■□□□□ 0.61
NCSTN-208ENST00000438008 NT5C1BQ96P26 610 aa18.87■□□□□ 0.61
NCSTN-208ENST00000438008 TRPC7Q9HCX4 862 aa18.87■□□□□ 0.61
NCSTN-208ENST00000438008 HEBP1Q9NRV9 189 aa18.87■□□□□ 0.61
NCSTN-208ENST00000438008 CCL26Q9Y258 94 aa18.87■□□□□ 0.61
NCSTN-208ENST00000438008 KANSL1LA0AUZ9 987 aa18.86■□□□□ 0.61
NCSTN-208ENST00000438008 C2orf78A6NCI8 922 aa18.86■□□□□ 0.61
NCSTN-208ENST00000438008 STK25O00506 426 aa18.86■□□□□ 0.61
NCSTN-208ENST00000438008 GLULP15104 373 aa18.86■□□□□ 0.61
NCSTN-208ENST00000438008 RFX1P22670 979 aa18.86■□□□□ 0.61
NCSTN-208ENST00000438008 ADORA2BP29275 332 aa18.86■□□□□ 0.61
NCSTN-208ENST00000438008 MAP3K7CLP57077 242 aa18.86■□□□□ 0.61
NCSTN-208ENST00000438008 LRMPQ12912 555 aa18.86■□□□□ 0.61
NCSTN-208ENST00000438008 ZNF394Q53GI3 561 aa18.86■□□□□ 0.61
NCSTN-208ENST00000438008 PPP1R26Q5T8A7 1209 aaPredicted RBP18.86■□□□□ 0.61
NCSTN-208ENST00000438008 ARHGAP17Q68EM7 881 aa18.86■□□□□ 0.61
NCSTN-208ENST00000438008 CLEC20AQ6ZU45 233 aa18.86■□□□□ 0.61
NCSTN-208ENST00000438008 PDZD8Q8NEN9 1154 aa18.86■□□□□ 0.61
NCSTN-208ENST00000438008 SCAMP5Q8TAC9 235 aa18.86■□□□□ 0.61
NCSTN-208ENST00000438008 CNOT6LQ96LI5 555 aaKnown RBP18.86■□□□□ 0.61
NCSTN-208ENST00000438008 SLC22A12Q96S37 553 aa18.86■□□□□ 0.61
NCSTN-208ENST00000438008 CYP2S1Q96SQ9 504 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms