RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 TRIM68Q6AZZ1 485 aa19.46■□□□□ 0.71
HMGN1-207ENST00000436324 PAQR9Q6ZVX9 377 aa19.46■□□□□ 0.71
HMGN1-207ENST00000436324 CCDC150Q8NCX0 1101 aa19.46■□□□□ 0.71
HMGN1-207ENST00000436324 RIN3Q8TB24 985 aa19.46■□□□□ 0.71
HMGN1-207ENST00000436324 CLDN23Q96B33 292 aa19.46■□□□□ 0.71
HMGN1-207ENST00000436324 KCNK16Q96T55 309 aa19.46■□□□□ 0.71
HMGN1-207ENST00000436324 C8orf33Q9H7E9 229 aaPredicted RBP19.46■□□□□ 0.71
HMGN1-207ENST00000436324 LMAN1LQ9HAT1 526 aa19.46■□□□□ 0.71
HMGN1-207ENST00000436324 FAM49BQ9NUQ9 324 aa19.46■□□□□ 0.71
HMGN1-207ENST00000436324 TICRRQ7Z2Z1 1910 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 SOBPA7XYQ1 873 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 BIN1O00499 593 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 LAMTOR5O43504 91 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 CD44P16070 742 aaKnown RBP19.45■□□□□ 0.7
HMGN1-207ENST00000436324 CD58P19256 250 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 GTF2H1P32780 548 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 MXI1P50539 228 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 FKBP3Q00688 224 aaKnown RBP19.45■□□□□ 0.7
HMGN1-207ENST00000436324 PLCB2Q00722 1185 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 ENPEPQ07075 957 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 TAF10Q12962 218 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 FZD5Q13467 585 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 STIM1Q13586 685 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 DCAF17Q5H9S7 520 aaPredicted RBP19.45■□□□□ 0.7
HMGN1-207ENST00000436324 KLHL10Q6JEL2 608 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 CC2D1AQ6P1N0 951 aaPredicted RBP19.45■□□□□ 0.7
HMGN1-207ENST00000436324 ELOA2Q8IYF1 753 aaPredicted RBP19.45■□□□□ 0.7
HMGN1-207ENST00000436324 C12orf29Q8N999 325 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 SEMA4DQ92854 862 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 CEP295NLQ96MC4 621 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 TTLL2Q9BWV7 592 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 GTPBP4Q9BZE4 634 aaKnown RBP19.45■□□□□ 0.7
HMGN1-207ENST00000436324 KIF9Q9HAQ2 790 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 KRT82Q9NSB4 513 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 EHD2Q9NZN4 543 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 CHMP5Q9NZZ3 219 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 GCNT4Q9P109 453 aa19.45■□□□□ 0.7
HMGN1-207ENST00000436324 NUP210Q8TEM1 1887 aaPredicted RBP19.44■□□□□ 0.7
HMGN1-207ENST00000436324 SPECC1L-ADORA2AF8WAN1 911 aa19.44■□□□□ 0.7
HMGN1-207ENST00000436324 AP1G2O75843 785 aa19.44■□□□□ 0.7
HMGN1-207ENST00000436324 SP9P0CG40 484 aa19.44■□□□□ 0.7
HMGN1-207ENST00000436324 ARSAP15289 507 aa19.44■□□□□ 0.7
HMGN1-207ENST00000436324 HDCP19113 662 aa19.44■□□□□ 0.7
HMGN1-207ENST00000436324 ADORA2BP29275 332 aa19.44■□□□□ 0.7
HMGN1-207ENST00000436324 NBL1P41271 181 aa19.44■□□□□ 0.7
HMGN1-207ENST00000436324 TXNDC11Q6PKC3 985 aa19.44■□□□□ 0.7
HMGN1-207ENST00000436324 UNC93AQ86WB7 457 aa19.44■□□□□ 0.7
HMGN1-207ENST00000436324 FUKQ8N0W3 1084 aa19.44■□□□□ 0.7
HMGN1-207ENST00000436324 NUP93Q8N1F7 819 aa19.44■□□□□ 0.7
HMGN1-207ENST00000436324 ZNF687Q8N1G0 1237 aa19.44■□□□□ 0.7
HMGN1-207ENST00000436324 CRYBG2Q8N1P7 616 aa19.44■□□□□ 0.7
HMGN1-207ENST00000436324 SLC2A14Q8TDB8 520 aa19.44■□□□□ 0.7
HMGN1-207ENST00000436324 SMARCD1Q96GM5 515 aa19.44■□□□□ 0.7
HMGN1-207ENST00000436324 TWNKQ96RR1 684 aa19.44■□□□□ 0.7
HMGN1-207ENST00000436324 NIF3L1Q9GZT8 377 aa19.44■□□□□ 0.7
HMGN1-207ENST00000436324 EBF3Q9H4W6 596 aa19.44■□□□□ 0.7
HMGN1-207ENST00000436324 R4GN57 208 aa19.44■□□□□ 0.7
HMGN1-207ENST00000436324 CACNA1HO95180 2353 aa19.43■□□□□ 0.7
HMGN1-207ENST00000436324 PSMA7O14818 248 aa19.43■□□□□ 0.7
HMGN1-207ENST00000436324 SLC16A3O15427 465 aaKnown RBP19.43■□□□□ 0.7
HMGN1-207ENST00000436324 STX10O60499 249 aa19.43■□□□□ 0.7
HMGN1-207ENST00000436324 GFRA3O60609 400 aa19.43■□□□□ 0.7
HMGN1-207ENST00000436324 YWHAQP27348 245 aa19.43■□□□□ 0.7
HMGN1-207ENST00000436324 CTHP32929 405 aa19.43■□□□□ 0.7
HMGN1-207ENST00000436324 MAGEA9P43362 315 aa19.43■□□□□ 0.7
HMGN1-207ENST00000436324 CSTF1Q05048 431 aaKnown RBP19.43■□□□□ 0.7
HMGN1-207ENST00000436324 LRRC63Q05C16 580 aa19.43■□□□□ 0.7
HMGN1-207ENST00000436324 ZNF268Q14587 947 aaPredicted RBP19.43■□□□□ 0.7
HMGN1-207ENST00000436324 PON2Q15165 354 aa19.43■□□□□ 0.7
HMGN1-207ENST00000436324 ITPRIPL2Q3MIP1 535 aa19.43■□□□□ 0.7
HMGN1-207ENST00000436324 ZC3H3Q8IXZ2 948 aaKnown RBP19.43■□□□□ 0.7
HMGN1-207ENST00000436324 MAML2Q8IZL2 1156 aaPredicted RBP19.43■□□□□ 0.7
HMGN1-207ENST00000436324 FBXL13Q8NEE6 735 aa19.43■□□□□ 0.7
HMGN1-207ENST00000436324 SCAMP5Q8TAC9 235 aa19.43■□□□□ 0.7
HMGN1-207ENST00000436324 SH3RF2Q8TEC5 729 aa19.43■□□□□ 0.7
HMGN1-207ENST00000436324 DHTKD1Q96HY7 919 aaPredicted RBP19.43■□□□□ 0.7
HMGN1-207ENST00000436324 FAM83CQ9BQN1 747 aa19.43■□□□□ 0.7
HMGN1-207ENST00000436324 CYP3A43Q9HB55 503 aa19.43■□□□□ 0.7
HMGN1-207ENST00000436324 DMAP1Q9NPF5 467 aaPredicted RBP19.43■□□□□ 0.7
HMGN1-207ENST00000436324 HPS4Q9NQG7 708 aa19.43■□□□□ 0.7
HMGN1-207ENST00000436324 RBM12Q9NTZ6 932 aaKnown RBP19.43■□□□□ 0.7
HMGN1-207ENST00000436324 RAB20Q9NX57 234 aa19.43■□□□□ 0.7
HMGN1-207ENST00000436324 COL4A2P08572 1712 aa19.42■□□□□ 0.7
HMGN1-207ENST00000436324 ZNF840PA6NDX5 716 aa19.42■□□□□ 0.7
HMGN1-207ENST00000436324 BEST1O76090 585 aa19.42■□□□□ 0.7
HMGN1-207ENST00000436324 BMP6P22004 513 aa19.42■□□□□ 0.7
HMGN1-207ENST00000436324 RPS9P46781 194 aaKnown RBP19.42■□□□□ 0.7
HMGN1-207ENST00000436324 MLLT6P55198 1093 aaPredicted RBP19.42■□□□□ 0.7
HMGN1-207ENST00000436324 MAP3K7CLP57077 242 aa19.42■□□□□ 0.7
HMGN1-207ENST00000436324 MTAPQ13126 283 aa19.42■□□□□ 0.7
HMGN1-207ENST00000436324 RUNX3Q13761 415 aa19.42■□□□□ 0.7
HMGN1-207ENST00000436324 MTF1Q14872 753 aa19.42■□□□□ 0.7
HMGN1-207ENST00000436324 ZNF77Q15935 545 aa19.42■□□□□ 0.7
HMGN1-207ENST00000436324 CBWD6Q4V339 395 aa19.42■□□□□ 0.7
HMGN1-207ENST00000436324 CBWD3Q5JTY5 395 aa19.42■□□□□ 0.7
HMGN1-207ENST00000436324 CBWD5Q5RIA9 395 aa19.42■□□□□ 0.7
HMGN1-207ENST00000436324 RALGPS2Q86X27 583 aaPredicted RBP19.42■□□□□ 0.7
HMGN1-207ENST00000436324 TATDN2Q93075 761 aa19.42■□□□□ 0.7
HMGN1-207ENST00000436324 FBXO32Q969P5 355 aa19.42■□□□□ 0.7
HMGN1-207ENST00000436324 JAKMIP2Q96AA8 810 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms