RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 CCDC130P13994 396 aa17.25■□□□□ 0.35
SMPD4-207ENST00000435455 NPR3P17342 541 aa17.25■□□□□ 0.35
SMPD4-207ENST00000435455 GDI1P31150 447 aa17.25■□□□□ 0.35
SMPD4-207ENST00000435455 PPP3CCP48454 512 aa17.25■□□□□ 0.35
SMPD4-207ENST00000435455 NUBP1P53384 320 aa17.25■□□□□ 0.35
SMPD4-207ENST00000435455 PRKCQQ04759 706 aa17.25■□□□□ 0.35
SMPD4-207ENST00000435455 MLF2Q15773 248 aaPredicted RBP17.25■□□□□ 0.35
SMPD4-207ENST00000435455 SLC44A4Q53GD3 710 aa17.25■□□□□ 0.35
SMPD4-207ENST00000435455 TXNDC8Q6A555 127 aa17.25■□□□□ 0.35
SMPD4-207ENST00000435455 NUP93Q8N1F7 819 aa17.25■□□□□ 0.35
SMPD4-207ENST00000435455 C12orf29Q8N999 325 aa17.25■□□□□ 0.35
SMPD4-207ENST00000435455 SLC2A14Q8TDB8 520 aa17.25■□□□□ 0.35
SMPD4-207ENST00000435455 TWNKQ96RR1 684 aa17.25■□□□□ 0.35
SMPD4-207ENST00000435455 HNRNPABQ99729 332 aaKnown RBP17.25■□□□□ 0.35
SMPD4-207ENST00000435455 PRRX2Q99811 253 aa17.25■□□□□ 0.35
SMPD4-207ENST00000435455 TBC1D17Q9HA65 648 aa17.25■□□□□ 0.35
SMPD4-207ENST00000435455 KIF9Q9HAQ2 790 aa17.25■□□□□ 0.35
SMPD4-207ENST00000435455 TRPV5Q9NQA5 729 aa17.25■□□□□ 0.35
SMPD4-207ENST00000435455 KRT82Q9NSB4 513 aa17.25■□□□□ 0.35
SMPD4-207ENST00000435455 CISHQ9NSE2 258 aa17.25■□□□□ 0.35
SMPD4-207ENST00000435455 FAM49BQ9NUQ9 324 aa17.25■□□□□ 0.35
SMPD4-207ENST00000435455 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.25■□□□□ 0.35
SMPD4-207ENST00000435455 NCANO14594 1321 aa17.24■□□□□ 0.35
SMPD4-207ENST00000435455 TICRRQ7Z2Z1 1910 aa17.24■□□□□ 0.35
SMPD4-207ENST00000435455 CHADO15335 359 aa17.24■□□□□ 0.35
SMPD4-207ENST00000435455 FAM200BP0CF97 657 aa17.24■□□□□ 0.35
SMPD4-207ENST00000435455 AOC1P19801 751 aa17.24■□□□□ 0.35
SMPD4-207ENST00000435455 TBXAS1P24557 533 aaPredicted RBP17.24■□□□□ 0.35
SMPD4-207ENST00000435455 PDE6CP51160 858 aa17.24■□□□□ 0.35
SMPD4-207ENST00000435455 VCPP55072 806 aaKnown RBP17.24■□□□□ 0.35
SMPD4-207ENST00000435455 STARD6P59095 220 aa17.24■□□□□ 0.35
SMPD4-207ENST00000435455 USP46P62068 366 aa17.24■□□□□ 0.35
SMPD4-207ENST00000435455 FCHO2Q0JRZ9 810 aa17.24■□□□□ 0.35
SMPD4-207ENST00000435455 KCNH2Q12809 1159 aa17.24■□□□□ 0.35
SMPD4-207ENST00000435455 CUL2Q13617 745 aa17.24■□□□□ 0.35
SMPD4-207ENST00000435455 TPD52L1Q16890 204 aaPredicted RBP17.24■□□□□ 0.35
SMPD4-207ENST00000435455 CWF19L1Q69YN2 538 aaKnown RBP17.24■□□□□ 0.35
SMPD4-207ENST00000435455 CELF5Q8N6W0 485 aaKnown RBP17.24■□□□□ 0.35
SMPD4-207ENST00000435455 WHAMMQ8TF30 809 aa17.24■□□□□ 0.35
SMPD4-207ENST00000435455 RSPRY1Q96DX4 576 aa17.24■□□□□ 0.35
SMPD4-207ENST00000435455 CYFIP2Q96F07 1278 aa17.24■□□□□ 0.35
SMPD4-207ENST00000435455 NT5C1BQ96P26 610 aa17.24■□□□□ 0.35
SMPD4-207ENST00000435455 SLITRK1Q96PX8 696 aa17.24■□□□□ 0.35
SMPD4-207ENST00000435455 CSNK1G1Q9HCP0 422 aa17.24■□□□□ 0.35
SMPD4-207ENST00000435455 TDP1Q9NUW8 608 aa17.24■□□□□ 0.35
SMPD4-207ENST00000435455 THG1LQ9NWX6 298 aaKnown RBP17.24■□□□□ 0.35
SMPD4-207ENST00000435455 COMMD8Q9NX08 183 aa17.24■□□□□ 0.35
SMPD4-207ENST00000435455 F5P12259 2224 aa17.24■□□□□ 0.35
SMPD4-207ENST00000435455 PATJQ8NI35 1801 aa17.24■□□□□ 0.35
SMPD4-207ENST00000435455 TRAV19A0A0A6YYK7 116 aa17.23■□□□□ 0.35
SMPD4-207ENST00000435455 MBD3O95983 291 aa17.23■□□□□ 0.35
SMPD4-207ENST00000435455 AFPP02771 609 aaKnown RBP17.23■□□□□ 0.35
SMPD4-207ENST00000435455 USP17L7P0C7H9 530 aa17.23■□□□□ 0.35
SMPD4-207ENST00000435455 PFKLP17858 780 aa17.23■□□□□ 0.35
SMPD4-207ENST00000435455 YWHAQP27348 245 aa17.23■□□□□ 0.35
SMPD4-207ENST00000435455 ERCC5P28715 1186 aaPredicted RBP17.23■□□□□ 0.35
SMPD4-207ENST00000435455 ADORA2BP29275 332 aa17.23■□□□□ 0.35
SMPD4-207ENST00000435455 PLCB2Q00722 1185 aa17.23■□□□□ 0.35
SMPD4-207ENST00000435455 ZNF268Q14587 947 aaPredicted RBP17.23■□□□□ 0.35
SMPD4-207ENST00000435455 ARHGAP29Q52LW3 1261 aa17.23■□□□□ 0.35
SMPD4-207ENST00000435455 CT47A1Q5JQC4 288 aaPredicted RBP17.23■□□□□ 0.35
SMPD4-207ENST00000435455 GPIHBP1Q8IV16 184 aa17.23■□□□□ 0.35
SMPD4-207ENST00000435455 PDZD8Q8NEN9 1154 aa17.23■□□□□ 0.35
SMPD4-207ENST00000435455 GPT2Q8TD30 523 aa17.23■□□□□ 0.35
SMPD4-207ENST00000435455 BPIFB1Q8TDL5 484 aa17.23■□□□□ 0.35
SMPD4-207ENST00000435455 OVCA2Q8WZ82 227 aa17.23■□□□□ 0.35
SMPD4-207ENST00000435455 CNOT6LQ96LI5 555 aaKnown RBP17.23■□□□□ 0.35
SMPD4-207ENST00000435455 HEXIM2Q96MH2 286 aaKnown RBP17.23■□□□□ 0.35
SMPD4-207ENST00000435455 KCNK16Q96T55 309 aa17.23■□□□□ 0.35
SMPD4-207ENST00000435455 SMOQ99835 787 aa17.23■□□□□ 0.35
SMPD4-207ENST00000435455 ARID3AQ99856 593 aa17.23■□□□□ 0.35
SMPD4-207ENST00000435455 TRPC7Q9HCX4 862 aa17.23■□□□□ 0.35
SMPD4-207ENST00000435455 RAPGEFL1Q9UHV5 662 aa17.23■□□□□ 0.35
SMPD4-207ENST00000435455 HELZP42694 1942 aaKnown RBP17.23■□□□□ 0.35
SMPD4-207ENST00000435455 MIA3Q5JRA6 1907 aa17.23■□□□□ 0.35
SMPD4-207ENST00000435455 KIF26AQ9ULI4 1882 aaPredicted RBP17.22■□□□□ 0.35
SMPD4-207ENST00000435455 COL4A2P08572 1712 aa17.22■□□□□ 0.35
SMPD4-207ENST00000435455 TNFRSF10BO14763 440 aa17.22■□□□□ 0.35
SMPD4-207ENST00000435455 CKMP06732 381 aa17.22■□□□□ 0.35
SMPD4-207ENST00000435455 TAF10Q12962 218 aa17.22■□□□□ 0.35
SMPD4-207ENST00000435455 DPCR1Q3MIW9 517 aa17.22■□□□□ 0.35
SMPD4-207ENST00000435455 ZNF394Q53GI3 561 aa17.22■□□□□ 0.35
SMPD4-207ENST00000435455 TMEM105Q8N8V8 129 aa17.22■□□□□ 0.35
SMPD4-207ENST00000435455 SLC4A11Q8NBS3 891 aa17.22■□□□□ 0.35
SMPD4-207ENST00000435455 CSGALNACT1Q8TDX6 532 aa17.22■□□□□ 0.35
SMPD4-207ENST00000435455 USP13Q92995 863 aaPredicted RBP17.22■□□□□ 0.35
SMPD4-207ENST00000435455 FBXO32Q969P5 355 aa17.22■□□□□ 0.35
SMPD4-207ENST00000435455 TMEM176AQ96HP8 235 aa17.22■□□□□ 0.35
SMPD4-207ENST00000435455 MED15Q96RN5 788 aa17.22■□□□□ 0.35
SMPD4-207ENST00000435455 PNPLA8Q9NP80 782 aa17.22■□□□□ 0.35
SMPD4-207ENST00000435455 IL37Q9NZH6 218 aa17.22■□□□□ 0.35
SMPD4-207ENST00000435455 WDFY4Q6ZS81 3184 aa17.22■□□□□ 0.35
SMPD4-207ENST00000435455 CACNA1HO95180 2353 aa17.21■□□□□ 0.35
SMPD4-207ENST00000435455 KANSL1LA0AUZ9 987 aa17.21■□□□□ 0.35
SMPD4-207ENST00000435455 GLULP15104 373 aa17.21■□□□□ 0.35
SMPD4-207ENST00000435455 SLC5A3P53794 718 aa17.21■□□□□ 0.35
SMPD4-207ENST00000435455 RAD23BP54727 409 aa17.21■□□□□ 0.35
SMPD4-207ENST00000435455 MAP3K7CLP57077 242 aa17.21■□□□□ 0.35
SMPD4-207ENST00000435455 IFRD2Q12894 506 aaPredicted RBP17.21■□□□□ 0.35
SMPD4-207ENST00000435455 LRMPQ12912 555 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms