RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 CHST13Q8NET6 341 aa6.91□□□□□ -1.3
USP54-206ENST00000433394 DNAJB14Q8TBM8 379 aa6.91□□□□□ -1.3
USP54-206ENST00000433394 EDAQ92838 391 aa6.91□□□□□ -1.3
USP54-206ENST00000433394 FAM227BQ96M60 508 aa6.91□□□□□ -1.3
USP54-206ENST00000433394 ADOQ96SZ5 270 aa6.91□□□□□ -1.3
USP54-206ENST00000433394 SMOC2Q9H3U7 446 aa6.91□□□□□ -1.3
USP54-206ENST00000433394 PARD6AQ9NPB6 346 aa6.91□□□□□ -1.3
USP54-206ENST00000433394 RRN3Q9NYV6 651 aa6.91□□□□□ -1.3
USP54-206ENST00000433394 C9orf78Q9NZ63 289 aaPredicted RBP6.91□□□□□ -1.3
USP54-206ENST00000433394 KIF17Q9P2E2 1029 aa6.91□□□□□ -1.3
USP54-206ENST00000433394 ZNF69Q9UC07 566 aa6.91□□□□□ -1.3
USP54-206ENST00000433394 NDRG4Q9ULP0 352 aaKnown RBP6.91□□□□□ -1.3
USP54-206ENST00000433394 GPR52Q9Y2T5 361 aa6.91□□□□□ -1.3
USP54-206ENST00000433394 LRRFIP2Q9Y608 721 aaKnown RBP6.91□□□□□ -1.3
USP54-206ENST00000433394 HMX3A6NHT5 357 aa6.9□□□□□ -1.3
USP54-206ENST00000433394 hCG_1984214I3L0E3 225 aa6.9□□□□□ -1.3
USP54-206ENST00000433394 ZNF185O15231 689 aa6.9□□□□□ -1.3
USP54-206ENST00000433394 ZSCAN9O15535 394 aaPredicted RBP6.9□□□□□ -1.3
USP54-206ENST00000433394 USP1O94782 785 aa6.9□□□□□ -1.3
USP54-206ENST00000433394 SCNN1GP51170 649 aa6.9□□□□□ -1.3
USP54-206ENST00000433394 PGDP52209 483 aa6.9□□□□□ -1.3
USP54-206ENST00000433394 CXADRP78310 365 aa6.9□□□□□ -1.3
USP54-206ENST00000433394 BOP1Q14137 746 aaKnown RBP6.9□□□□□ -1.3
USP54-206ENST00000433394 RRP1BQ14684 758 aaKnown RBP6.9□□□□□ -1.3
USP54-206ENST00000433394 KRTAP19-4Q3LI73 84 aa6.9□□□□□ -1.3
USP54-206ENST00000433394 RBM20Q5T481 1227 aaKnown RBP6.9□□□□□ -1.3
USP54-206ENST00000433394 KCTD20Q7Z5Y7 419 aa6.9□□□□□ -1.3
USP54-206ENST00000433394 ADGRG5Q8IZF4 528 aa6.9□□□□□ -1.3
USP54-206ENST00000433394 TMEM132CQ8N3T6 1108 aa6.9□□□□□ -1.3
USP54-206ENST00000433394 USP13Q92995 863 aaPredicted RBP6.9□□□□□ -1.3
USP54-206ENST00000433394 BOD1Q96IK1 185 aa6.9□□□□□ -1.3
USP54-206ENST00000433394 HIST1H2AAQ96QV6 131 aa6.9□□□□□ -1.3
USP54-206ENST00000433394 OSBPL9Q96SU4 736 aa6.9□□□□□ -1.3
USP54-206ENST00000433394 NEU1Q99519 415 aa6.9□□□□□ -1.3
USP54-206ENST00000433394 TPSD1Q9BZJ3 242 aa6.9□□□□□ -1.3
USP54-206ENST00000433394 TRIM5Q9C035 493 aa6.9□□□□□ -1.3
USP54-206ENST00000433394 INO80BQ9C086 356 aaPredicted RBP6.9□□□□□ -1.3
USP54-206ENST00000433394 MAF1Q9H063 256 aa6.9□□□□□ -1.3
USP54-206ENST00000433394 INTS13Q9NVM9 706 aa6.9□□□□□ -1.3
USP54-206ENST00000433394 IGSF9Q9P2J2 1179 aa6.9□□□□□ -1.3
USP54-206ENST00000433394 USP22Q9UPT9 525 aa6.9□□□□□ -1.3
USP54-206ENST00000433394 MRPS17Q9Y2R5 130 aaKnown RBP6.9□□□□□ -1.3
USP54-206ENST00000433394 A0A087WZ62 844 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 PSMD9O00233 223 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 CD3EAPO15446 510 aaKnown RBP6.89□□□□□ -1.31
USP54-206ENST00000433394 ACTL6BO94805 426 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 TNFRSF6BO95407 300 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 CFIP05156 583 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 CD19P15391 556 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 PECAM1P16284 738 aaPredicted RBP6.89□□□□□ -1.31
USP54-206ENST00000433394 MST1P26927 711 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 DDIT3P35638 169 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 TOB1P50616 345 aaPredicted RBP6.89□□□□□ -1.31
USP54-206ENST00000433394 AP2B1P63010 937 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 PRKD1Q15139 912 aaPredicted RBP6.89□□□□□ -1.31
USP54-206ENST00000433394 TAF5Q15542 800 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 CD300EQ496F6 205 aaPredicted RBP6.89□□□□□ -1.31
USP54-206ENST00000433394 RABL3Q5HYI8 236 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 TMTC4Q5T4D3 741 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 MANEALQ5VSG8 457 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 METRNLQ641Q3 311 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 RAP1GAP2Q684P5 730 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 TANGO2Q6ICL3 276 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 SULT6B1Q6IMI4 303 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 B3GALNT2Q8NCR0 500 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 Q8TCH9 128 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 ZNF483Q8TF39 744 aaPredicted RBP6.89□□□□□ -1.31
USP54-206ENST00000433394 OSCP1Q8WVF1 389 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 RSC1A1Q92681 617 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 FAM136AQ96C01 138 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 ZDHHC12Q96GR4 267 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 RTKNQ9BST9 563 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 ALOXE3Q9BYJ1 711 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 ZHX3Q9H4I2 956 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 CXorf36Q9H7Y0 433 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 GBA2Q9HCG7 927 aaPredicted RBP6.89□□□□□ -1.31
USP54-206ENST00000433394 PGAP2Q9UHJ9 254 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 NFU1Q9UMS0 254 aa6.89□□□□□ -1.31
USP54-206ENST00000433394 KRTAP23-1A1A580 65 aa6.88□□□□□ -1.31
USP54-206ENST00000433394 GATMP50440 423 aa6.88□□□□□ -1.31
USP54-206ENST00000433394 BCAT1P54687 386 aa6.88□□□□□ -1.31
USP54-206ENST00000433394 MC2RQ01718 297 aa6.88□□□□□ -1.31
USP54-206ENST00000433394 TEDDM1Q5T9Z0 273 aa6.88□□□□□ -1.31
USP54-206ENST00000433394 JAKMIP3Q5VZ66 844 aa6.88□□□□□ -1.31
USP54-206ENST00000433394 SP5Q6BEB4 398 aaPredicted RBP6.88□□□□□ -1.31
USP54-206ENST00000433394 CYP26C1Q6V0L0 522 aa6.88□□□□□ -1.31
USP54-206ENST00000433394 RAB11FIP2Q7L804 512 aa6.88□□□□□ -1.31
USP54-206ENST00000433394 RAB11FIP4Q86YS3 637 aa6.88□□□□□ -1.31
USP54-206ENST00000433394 FSTL5Q8N475 847 aaPredicted RBP6.88□□□□□ -1.31
USP54-206ENST00000433394 LOXL4Q96JB6 756 aa6.88□□□□□ -1.31
USP54-206ENST00000433394 UBXN10Q96LJ8 280 aa6.88□□□□□ -1.31
USP54-206ENST00000433394 EIF3CQ99613 913 aaKnown RBP6.88□□□□□ -1.31
USP54-206ENST00000433394 PYM1Q9BRP8 204 aaKnown RBP6.88□□□□□ -1.31
USP54-206ENST00000433394 XYLT2Q9H1B5 865 aa6.88□□□□□ -1.31
USP54-206ENST00000433394 TP63Q9H3D4 680 aaPredicted RBP6.88□□□□□ -1.31
USP54-206ENST00000433394 ITM2CQ9NQX7 267 aa6.88□□□□□ -1.31
USP54-206ENST00000433394 PARPBPQ9NWS1 579 aa6.88□□□□□ -1.31
USP54-206ENST00000433394 SERTAD3Q9UJW9 196 aa6.88□□□□□ -1.31
USP54-206ENST00000433394 CHST2Q9Y4C5 530 aa6.88□□□□□ -1.31
USP54-206ENST00000433394 DTNAQ9Y4J8 743 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms