RNA–Protein interactions for RNA: ENST00000430086.1

CCDC88A-206, Transcript of coiled-coil domain containing 88A, humanhuman

TSL 3

Gene CCDC88A, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88A-206ENST00000430086 GRASPQ7Z6J2 395 aaPredicted RBP6.85□□□□□ -1.31
CCDC88A-206ENST00000430086 ABRAQ8N0Z2 381 aa6.85□□□□□ -1.31
CCDC88A-206ENST00000430086 OSCP1Q8WVF1 389 aa6.85□□□□□ -1.31
CCDC88A-206ENST00000430086 DUSP26Q9BV47 211 aa6.85□□□□□ -1.31
CCDC88A-206ENST00000430086 COLEC11Q9BWP8 271 aa6.85□□□□□ -1.31
CCDC88A-206ENST00000430086 GLOD4Q9HC38 313 aa6.85□□□□□ -1.31
CCDC88A-206ENST00000430086 MID2Q9UJV3 735 aa6.85□□□□□ -1.31
CCDC88A-206ENST00000430086 TLK1Q9UKI8 766 aa6.85□□□□□ -1.31
CCDC88A-206ENST00000430086 ITGB1BP2Q9UKP3 347 aa6.85□□□□□ -1.31
CCDC88A-206ENST00000430086 CAPN11Q9UMQ6 739 aa6.85□□□□□ -1.31
CCDC88A-206ENST00000430086 LINC00473A8K010 186 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 H7C4K7 107 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 GCOM1H8Y6P7 765 aaPredicted RBP6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 KPNA5O15131 536 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 RRP9O43818 475 aaKnown RBP6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 IL6RP08887 468 aaPredicted RBP6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 IL1R2P27930 398 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 ADORA2AP29274 412 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 LIPAP38571 399 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 PTDSS1P48651 473 aaKnown RBP6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 CPT1AP50416 773 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 CCNIQ14094 377 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 PTCHD3Q3KNS1 767 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 TREML2Q5T2D2 321 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 CERCAMQ5T4B2 595 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 NOL8Q76FK4 1167 aaKnown RBP6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 SPARTQ8N0X7 666 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 RNF152Q8N8N0 203 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 ATP11CQ8NB49 1132 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 GLG1Q92896 1179 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 TBCBQ99426 244 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 TIMP4Q99727 224 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 FAM83DQ9H4H8 585 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 SLITRK6Q9H5Y7 841 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 ARHGEF3Q9NR81 526 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 SLC17A6Q9P2U8 582 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 DKK4Q9UBT3 224 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 ZNF212Q9UDV6 495 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 INSL6Q9Y581 213 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 ENTPD2Q9Y5L3 495 aa6.84□□□□□ -1.31
CCDC88A-206ENST00000430086 A1L4Q6 167 aa6.83□□□□□ -1.32
CCDC88A-206ENST00000430086 POM121BA6NF01 834 aa6.83□□□□□ -1.32
CCDC88A-206ENST00000430086 ZAR1LA6NP61 321 aa6.83□□□□□ -1.32
CCDC88A-206ENST00000430086 KIAA0355O15063 1070 aa6.83□□□□□ -1.32
CCDC88A-206ENST00000430086 TTLL1O95922 423 aa6.83□□□□□ -1.32
CCDC88A-206ENST00000430086 ERBB2P04626 1255 aa6.83□□□□□ -1.32
CCDC88A-206ENST00000430086 TSHRP16473 764 aa6.83□□□□□ -1.32
CCDC88A-206ENST00000430086 ALDH9A1P49189 494 aa6.83□□□□□ -1.32
CCDC88A-206ENST00000430086 CLK3P49761 638 aaKnown RBP6.83□□□□□ -1.32
CCDC88A-206ENST00000430086 BCAT1P54687 386 aa6.83□□□□□ -1.32
CCDC88A-206ENST00000430086 PICALMQ13492 652 aa6.83□□□□□ -1.32
CCDC88A-206ENST00000430086 ZNF750Q32MQ0 723 aa6.83□□□□□ -1.32
CCDC88A-206ENST00000430086 MAP9Q49MG5 647 aa6.83□□□□□ -1.32
CCDC88A-206ENST00000430086 DEPDC1Q5TB30 811 aa6.83□□□□□ -1.32
CCDC88A-206ENST00000430086 DPP9Q86TI2 863 aa6.83□□□□□ -1.32
CCDC88A-206ENST00000430086 IZUMO1Q8IYV9 350 aa6.83□□□□□ -1.32
CCDC88A-206ENST00000430086 SMCR8Q8TEV9 937 aaPredicted RBP6.83□□□□□ -1.32
CCDC88A-206ENST00000430086 SOCS4Q8WXH5 440 aa6.83□□□□□ -1.32
CCDC88A-206ENST00000430086 GBA2Q9HCG7 927 aaPredicted RBP6.83□□□□□ -1.32
CCDC88A-206ENST00000430086 SNX14Q9Y5W7 946 aa6.83□□□□□ -1.32
CCDC88A-206ENST00000430086 AQP7P3A6NL99 342 aa6.82□□□□□ -1.32
CCDC88A-206ENST00000430086 RAB27BO00194 218 aa6.82□□□□□ -1.32
CCDC88A-206ENST00000430086 THAP12O43422 761 aa6.82□□□□□ -1.32
CCDC88A-206ENST00000430086 A1BGP04217 495 aa6.82□□□□□ -1.32
CCDC88A-206ENST00000430086 JUPP14923 745 aa6.82□□□□□ -1.32
CCDC88A-206ENST00000430086 TPH1P17752 444 aa6.82□□□□□ -1.32
CCDC88A-206ENST00000430086 WT1P19544 449 aaPredicted RBP6.82□□□□□ -1.32
CCDC88A-206ENST00000430086 CLCN2P51788 898 aa6.82□□□□□ -1.32
CCDC88A-206ENST00000430086 ZNF362Q5T0B9 420 aaPredicted RBP6.82□□□□□ -1.32
CCDC88A-206ENST00000430086 CACHD1Q5VU97 1274 aa6.82□□□□□ -1.32
CCDC88A-206ENST00000430086 PLAG1Q6DJT9 500 aa6.82□□□□□ -1.32
CCDC88A-206ENST00000430086 RNF44Q7L0R7 432 aa6.82□□□□□ -1.32
CCDC88A-206ENST00000430086 WDR53Q7Z5U6 358 aaPredicted RBP6.82□□□□□ -1.32
CCDC88A-206ENST00000430086 KCTD20Q7Z5Y7 419 aa6.82□□□□□ -1.32
CCDC88A-206ENST00000430086 DNAJB14Q8TBM8 379 aa6.82□□□□□ -1.32
CCDC88A-206ENST00000430086 IQCDQ96DY2 449 aa6.82□□□□□ -1.32
CCDC88A-206ENST00000430086 STARD7Q9NQZ5 370 aa6.82□□□□□ -1.32
CCDC88A-206ENST00000430086 ZNHIT2Q9UHR6 403 aa6.82□□□□□ -1.32
CCDC88A-206ENST00000430086 PADI4Q9UM07 663 aa6.82□□□□□ -1.32
CCDC88A-206ENST00000430086 CLCA1A8K7I4 914 aa6.81□□□□□ -1.32
CCDC88A-206ENST00000430086 AREL1O15033 823 aa6.81□□□□□ -1.32
CCDC88A-206ENST00000430086 CD3EAPO15446 510 aaKnown RBP6.81□□□□□ -1.32
CCDC88A-206ENST00000430086 SRGAP2O75044 1071 aa6.81□□□□□ -1.32
CCDC88A-206ENST00000430086 RASAL1O95294 804 aa6.81□□□□□ -1.32
CCDC88A-206ENST00000430086 FESP07332 822 aa6.81□□□□□ -1.32
CCDC88A-206ENST00000430086 BMP5P22003 454 aa6.81□□□□□ -1.32
CCDC88A-206ENST00000430086 PRKAR1BP31321 381 aa6.81□□□□□ -1.32
CCDC88A-206ENST00000430086 STT3AP46977 705 aa6.81□□□□□ -1.32
CCDC88A-206ENST00000430086 ALDH5A1P51649 535 aaPredicted RBP6.81□□□□□ -1.32
CCDC88A-206ENST00000430086 AK2P54819 239 aa6.81□□□□□ -1.32
CCDC88A-206ENST00000430086 SOX10P56693 466 aa6.81□□□□□ -1.32
CCDC88A-206ENST00000430086 INHBEP58166 350 aa6.81□□□□□ -1.32
CCDC88A-206ENST00000430086 IL31Q6EBC2 164 aa6.81□□□□□ -1.32
CCDC88A-206ENST00000430086 ANKRD16Q6P6B7 361 aa6.81□□□□□ -1.32
CCDC88A-206ENST00000430086 CCDC146Q8IYE0 955 aa6.81□□□□□ -1.32
CCDC88A-206ENST00000430086 VGLL2Q8N8G2 317 aa6.81□□□□□ -1.32
CCDC88A-206ENST00000430086 RP9Q8TA86 221 aaKnown RBP6.81□□□□□ -1.32
CCDC88A-206ENST00000430086 TMEM171Q8WVE6 324 aa6.81□□□□□ -1.32
CCDC88A-206ENST00000430086 RSPRY1Q96DX4 576 aa6.81□□□□□ -1.32
CCDC88A-206ENST00000430086 UROC1Q96N76 676 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms