RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 TMEM237Q96Q45 408 aa13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 BCO2Q9BYV7 579 aa13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 SDCBP2Q9H190 292 aa13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 C2orf40Q9H1Z8 148 aa13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 WDR35Q9P2L0 1181 aa13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 HAO1Q9UJM8 370 aa13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 APOC4-APOC2K7ER74 178 aa13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 GAS2O43903 313 aaKnown RBP13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 WFS1O76024 890 aa13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 APOC2P02655 101 aa13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 KRT19P08727 400 aa13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 TGFB3P10600 412 aa13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 EIF3EP60228 445 aaKnown RBP13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 BBS9Q3SYG4 887 aa13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 TREML2Q5T2D2 321 aa13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 EEF1DP3Q658K8 133 aa13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 CDR2LQ86X02 465 aaPredicted RBP13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 FAM71DQ8N9W8 422 aa13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 KCTD6Q8NC69 237 aa13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 CMASQ8NFW8 434 aaPredicted RBP13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 ZNF668Q96K58 619 aaPredicted RBP13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 SYNCQ9H7C4 482 aa13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 XPO7Q9UIA9 1087 aaKnown RBP13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 SIX4Q9UIU6 781 aa13.94□□□□□ -0.18
SNRNP200-202ENST00000429650 A0A0G2JMZ2 1700 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 LRRC37A2A6NM11 1700 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 ACKR2O00590 384 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 B4GALT5O43286 388 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 T-ENOLP0DO92 83 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 MIPP30301 263 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 ZNF667Q5HYK9 610 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 RIOX2Q8IUF8 465 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 PALM2Q8IXS6 379 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 PDIK1LQ8N165 341 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 AGGF1Q8N302 714 aaeCLIP13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 TMEM130Q8N3G9 435 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 ZNF276Q8N554 614 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 BANPQ8N9N5 519 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 TCP10LQ8TDR4 215 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 HSPH1Q92598 858 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 INPP5DQ92835 1189 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 RSRC1Q96IZ7 334 aaKnown RBP13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 TWNKQ96RR1 684 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 BRCA1P38398 1863 aaKnown RBP13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 SMAPO00193 183 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 MCF2LO15068 1137 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 GJB1P08034 283 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 CXCL8P10145 99 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 RBP3P10745 1247 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 BASP1P80723 227 aaKnown RBP13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 MTA1Q13330 715 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 TMEM192Q8IY95 271 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 NME8Q8N427 588 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 SLC4A11Q8NBS3 891 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 FZD8Q9H461 694 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 HMGXB4Q9UGU5 601 aa13.93□□□□□ -0.18
SNRNP200-202ENST00000429650 PTPRFP10586 1907 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 WDR91A4D1P6 747 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 GOLGA8RI6L899 631 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 INO80B-WBP1J3KQ70 363 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 FZD9O00144 591 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 C2CD2LO14523 706 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 TM9SF1O15321 606 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 DIAPH2O60879 1101 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 ARIH2O95376 493 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 TRUB2O95900 331 aaKnown RBP13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 TSHRP16473 764 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 NRLP54845 237 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 RNASELQ05823 741 aaKnown RBP13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 PTPN11Q06124 597 aaPredicted RBP13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 DPYSL3Q14195 570 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 HSDL1Q3SXM5 330 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 SLC45A4Q5BKX6 768 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 NLRP9Q7RTR0 991 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 CCDC125Q86Z20 511 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 C1orf127Q8N9H9 656 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 SLC16A10Q8TF71 515 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 ALKBH8Q96BT7 664 aaKnown RBP13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 SLC7A6OSQ96CW6 309 aaPredicted RBP13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 NLRP4Q96MN2 994 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 KLF6Q99612 283 aaPredicted RBP13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 GPR20Q99678 358 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 CALN1Q9BXU9 219 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 INO80BQ9C086 356 aaPredicted RBP13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 CDT1Q9H211 546 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 C12orf65Q9H3J6 166 aaKnown RBP13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 SMYD3Q9H7B4 428 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 NPHS2Q9NP85 383 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 SLC17A7Q9P2U7 560 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 USP18Q9UMW8 372 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 CHMP2BQ9UQN3 213 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 LGR5O75473 907 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 RNF8O76064 485 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 MICAL2O94851 1124 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 NFICP08651 508 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 CLNS1AP54105 237 aaKnown RBP13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 SEPT7Q16181 437 aaKnown RBP13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 PLEKHG4Q58EX7 1191 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 SPDYAQ5MJ70 313 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 FYB2Q5VWT5 728 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms