RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 NOTCH4Q99466 2003 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 DOCK4Q8N1I0 1966 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 CTAGE9A4FU28 777 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 GRXCR1A8MXD5 290 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 H0YGN5 161 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 RIOK3O14730 519 aaKnown RBP9.36□□□□□ -0.91
SMC6-204ENST00000428868 XPO1O14980 1071 aaKnown RBP9.36□□□□□ -0.91
SMC6-204ENST00000428868 DDX3YO15523 660 aaKnown RBP9.36□□□□□ -0.91
SMC6-204ENST00000428868 TBC1D4O60343 1298 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 GRAP2O75791 330 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 FAM200BP0CF97 657 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 SETSIPP0DME0 302 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 MYBL1P10243 752 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 MYOGP15173 224 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 NPR3P17342 541 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 COMTP21964 271 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 PAX3P23760 479 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 CYP2F1P24903 491 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 CXCR5P32302 372 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 MAGEA10P43363 369 aaPredicted RBP9.36□□□□□ -0.91
SMC6-204ENST00000428868 PLA2G4AP47712 749 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 RPL34P49207 117 aaKnown RBP9.36□□□□□ -0.91
SMC6-204ENST00000428868 NDUFV1P49821 464 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 ARPP19P56211 112 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 GSCP56915 257 aaPredicted RBP9.36□□□□□ -0.91
SMC6-204ENST00000428868 ADCY1Q08828 1119 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 ADIGQ0VDE8 80 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 CTXN3Q4LDR2 81 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 DCAF12L1Q5VU92 463 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 SDHAF4Q5VUM1 108 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 OR6B2Q6IFH4 312 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 C11orf63Q6NUN7 778 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 OLFML1Q6UWY5 402 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.36□□□□□ -0.91
SMC6-204ENST00000428868 DAAM2Q86T65 1068 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 PIGZQ86VD9 579 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 HERC6Q8IVU3 1022 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 THEM5Q8N1Q8 247 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 C3orf20Q8ND61 904 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 FEZF2Q8TBJ5 459 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 COG1Q8WTW3 980 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 AUTS2Q8WXX7 1259 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 KRT35Q92764 455 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 DPF3Q92784 378 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 KHSRPQ92945 711 aaKnown RBP eCLIP9.36□□□□□ -0.916e-8■□□□□ 8.3
SMC6-204ENST00000428868 C18orf8Q96DM3 657 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 TRIM11Q96F44 468 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 VCPIP1Q96JH7 1222 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 ZNF558Q96NG5 402 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 PGLYRP2Q96PD5 576 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 ALS2CR12Q96Q35 445 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 HTATIP2Q9BUP3 242 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 ADAM33Q9BZ11 813 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 MIS12Q9H081 205 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 RNF216Q9NWF9 866 aaPredicted RBP9.36□□□□□ -0.91
SMC6-204ENST00000428868 UVRAGQ9P2Y5 699 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 MRFAP1Q9Y605 127 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 ALG6Q9Y672 507 aa9.36□□□□□ -0.91
SMC6-204ENST00000428868 TMEM191CA6NGB0 347 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 PDE2AO00408 941 aaPredicted RBP9.35□□□□□ -0.91
SMC6-204ENST00000428868 C2CD2LO14523 706 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 TRAPPC3O43617 180 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 SOAT2O75908 522 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 LAG3P18627 525 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 TFE3P19532 575 aaPredicted RBP9.35□□□□□ -0.91
SMC6-204ENST00000428868 RFC1P35251 1148 aaPredicted RBP9.35□□□□□ -0.91
SMC6-204ENST00000428868 FLT3P36888 993 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 ALDH7A1P49419 539 aaKnown RBP9.35□□□□□ -0.91
SMC6-204ENST00000428868 TAS2R40P59535 323 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 TSPY1Q01534 308 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 ZNF268Q14587 947 aaPredicted RBP9.35□□□□□ -0.91
SMC6-204ENST00000428868 PSMD5Q16401 504 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 FAM102AQ5T9C2 384 aaPredicted RBP9.35□□□□□ -0.91
SMC6-204ENST00000428868 RASIP1Q5U651 963 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 PAPD7Q5XG87 772 aaKnown RBP9.35□□□□□ -0.91
SMC6-204ENST00000428868 ZNF280DQ6N043 979 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 AADACL2Q6P093 401 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 CHRDL2Q6WN34 429 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 RNF19BQ6ZMZ0 732 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 HFE2Q6ZVN8 426 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 BHLHA9Q7RTU4 235 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 TMEM110Q86TL2 294 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 SCUBE3Q8IX30 993 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 ARFGAP1Q8N6T3 406 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 SP7Q8TDD2 431 aaPredicted RBP9.35□□□□□ -0.91
SMC6-204ENST00000428868 IPO4Q8TEX9 1081 aaKnown RBP9.35□□□□□ -0.91
SMC6-204ENST00000428868 RIN2Q8WYP3 895 aaPredicted RBP9.35□□□□□ -0.91
SMC6-204ENST00000428868 CD101Q93033 1021 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 SMARCD1Q96GM5 515 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 OSBPL9Q96SU4 736 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 TTPALQ9BTX7 342 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 SELENOOQ9BVL4 669 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 HERC2P3Q9BVR0 1158 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 SYNCQ9H7C4 482 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 L2HGDHQ9H9P8 463 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 PARVAQ9NVD7 372 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 ABI2Q9NYB9 513 aaPredicted RBP9.35□□□□□ -0.91
SMC6-204ENST00000428868 MTRRQ9UBK8 725 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 SNX12Q9UMY4 172 aa9.35□□□□□ -0.91
SMC6-204ENST00000428868 USTQ9Y2C2 406 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms