RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 OXCT1P55809 520 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 RPS6P62753 249 aaKnown RBP9.28□□□□□ -0.92
CTNND1-208ENST00000428599 TTC39BQ5VTQ0 682 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-208ENST00000428599 RFX8Q6ZV50 586 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 SETD3Q86TU7 594 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-208ENST00000428599 HOMEZQ8IX15 550 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 BHMTQ93088 406 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 HPS3Q969F9 1004 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 FBXO32Q969P5 355 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 CENPTQ96BT3 561 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 L3MBTL3Q96JM7 780 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-208ENST00000428599 TAAR1Q96RJ0 339 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 BPIFA3Q9BQP9 254 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 VPS33BQ9H267 617 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 CCDC134Q9H6E4 229 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 TRPC5OSA6NMA1 111 aa9.27□□□□□ -0.92
CTNND1-208ENST00000428599 EXTL3O43909 919 aa9.27□□□□□ -0.92
CTNND1-208ENST00000428599 DDNO94850 711 aaPredicted RBP9.27□□□□□ -0.92
CTNND1-208ENST00000428599 PBLDP30039 288 aaPredicted RBP9.27□□□□□ -0.92
CTNND1-208ENST00000428599 BTKQ06187 659 aa9.27□□□□□ -0.92
CTNND1-208ENST00000428599 FAM83EQ2M2I3 478 aa9.27□□□□□ -0.92
CTNND1-208ENST00000428599 HLA-DQA1Q5Y7H0 255 aa9.27□□□□□ -0.92
CTNND1-208ENST00000428599 CLYBLQ8N0X4 340 aa9.27□□□□□ -0.92
CTNND1-208ENST00000428599 CAMKK1Q8N5S9 505 aa9.27□□□□□ -0.92
CTNND1-208ENST00000428599 EME1Q96AY2 570 aa9.27□□□□□ -0.92
CTNND1-208ENST00000428599 ATP6V1G3Q96LB4 118 aa9.27□□□□□ -0.92
CTNND1-208ENST00000428599 ECSITQ9BQ95 431 aa9.27□□□□□ -0.92
CTNND1-208ENST00000428599 GOLPH3Q9H4A6 298 aa9.27□□□□□ -0.92
CTNND1-208ENST00000428599 IMPAD1Q9NX62 359 aa9.27□□□□□ -0.92
CTNND1-208ENST00000428599 IFRD1O00458 451 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-208ENST00000428599 PHF2O75151 1096 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 GRAP2O75791 330 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 ITIH2P19823 946 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 CLK1P49759 484 aaKnown RBP9.27□□□□□ -0.93
CTNND1-208ENST00000428599 PAN2Q504Q3 1202 aaKnown RBP9.27□□□□□ -0.93
CTNND1-208ENST00000428599 NLRP14Q86W24 1093 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 MYO1HQ8N1T3 1032 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 ENGASEQ8NFI3 743 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 HPDLQ96IR7 371 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 REEP2Q9BRK0 252 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 TRIM9Q9C026 710 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 WDCPQ9H6R7 721 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 TMCC3Q9ULS5 477 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 CLEC16AQ2KHT3 1053 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 TRAPPC11Q7Z392 1133 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 HDDC2Q7Z4H3 204 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 VN1R5Q7Z5H4 357 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 ERO1BQ86YB8 467 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 SYTL1Q8IYJ3 562 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 AHCYL2Q96HN2 611 aaKnown RBP9.27□□□□□ -0.93
CTNND1-208ENST00000428599 PRRG3Q9BZD7 231 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 UBXN6Q9BZV1 441 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 TMEM117Q9H0C3 514 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 DSEQ9UL01 958 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 A0A1W2PQC6 194 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 GAS2O43903 313 aaKnown RBP9.27□□□□□ -0.93
CTNND1-208ENST00000428599 NBNO60934 754 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 ICAM1P05362 532 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 IL1R1P14778 569 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 PTK7Q13308 1070 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 MDH1BQ5I0G3 518 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 WLSQ5T9L3 541 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 NBPF12Q5TAG4 269 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-208ENST00000428599 TIGD7Q6NT04 549 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-208ENST00000428599 SLC30A5Q8TAD4 765 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 RIN3Q8TB24 985 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 CNBD2Q96M20 576 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 OSBPL1AQ9BXW6 950 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 RNF112Q9ULX5 631 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 ZDHHC9Q9Y397 364 aa9.27□□□□□ -0.93
CTNND1-208ENST00000428599 P4HA2O15460 535 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 IFNA14P01570 189 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 ITGALP20701 1170 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 MAPK9P45984 424 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 SPATA21Q7Z572 469 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 C19orf60Q96EN9 201 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 RBM15Q96T37 977 aaKnown RBP eCLIP9.26□□□□□ -0.932e-7■■□□□ 13.5
CTNND1-208ENST00000428599 NIF3L1Q9GZT8 377 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 GBA2Q9HCG7 927 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-208ENST00000428599 DIABLOQ9NR28 239 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 KCNH7Q9NS40 1196 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 NEU2Q9Y3R4 380 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 CDY2AQ9Y6F7 541 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 CDY1Q9Y6F8 540 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 IGSF9BQ9UPX0 1349 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 REREQ9P2R6 1566 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 VGLL3A8MV65 326 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 PCDH8O95206 1070 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 AGTP01019 485 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 BACE1P56817 501 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 GUCY1A3Q02108 690 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 SGCGQ13326 291 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 DDX39BQ13838 428 aaKnown RBP9.26□□□□□ -0.93
CTNND1-208ENST00000428599 ZCCHC8Q6NZY4 707 aaKnown RBP9.26□□□□□ -0.93
CTNND1-208ENST00000428599 PLEKHH3Q7Z736 793 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 UBA3Q8TBC4 463 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 BLOC1S5Q8TDH9 187 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 DDI1Q8WTU0 396 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 TFB1MQ8WVM0 346 aaKnown RBP9.26□□□□□ -0.93
CTNND1-208ENST00000428599 RUBCNQ92622 972 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms