RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 NOMO2Q5JPE7 1267 aa18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 FAM117BQ6P1L5 589 aa18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 ANKRD52Q8NB46 1076 aa18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 B3GALNT2Q8NCR0 500 aa18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 SPATA18Q8TC71 538 aa18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 STK32AQ8WU08 396 aa18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 EPC1Q9H2F5 836 aa18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 ANKZF1Q9H8Y5 726 aa18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 HESX1Q9UBX0 185 aa18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 LHX1P48742 406 aa18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 PSMC1P62191 440 aaKnown RBP18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 ZNF252P-AS1Q0IIN9 211 aa18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 DSTYKQ6XUX3 929 aa18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 IPO4Q8TEX9 1081 aaKnown RBP18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 MCEEQ96PE7 176 aa18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 SLC4A5Q9BY07 1137 aa18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 MIS12Q9H081 205 aa18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 SYNCQ9H7C4 482 aa18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 RBM12Q9NTZ6 932 aaKnown RBP18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 MTCH2Q9Y6C9 303 aa18.92■□□□□ 0.62
AC055811.2-201ENST00000427497 M0QZQ0 153 aa18.91■□□□□ 0.62
AC055811.2-201ENST00000427497 B3GAT3O94766 335 aa18.91■□□□□ 0.62
AC055811.2-201ENST00000427497 CCDC130P13994 396 aa18.91■□□□□ 0.62
AC055811.2-201ENST00000427497 OGDHQ02218 1023 aa18.91■□□□□ 0.62
AC055811.2-201ENST00000427497 DCUN1D2Q6PH85 259 aa18.91■□□□□ 0.62
AC055811.2-201ENST00000427497 DCLRE1AQ6PJP8 1040 aa18.91■□□□□ 0.62
AC055811.2-201ENST00000427497 MICALL1Q8N3F8 863 aa18.91■□□□□ 0.62
AC055811.2-201ENST00000427497 NIPA2Q8N8Q9 360 aa18.91■□□□□ 0.62
AC055811.2-201ENST00000427497 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.91■□□□□ 0.62
AC055811.2-201ENST00000427497 URGCPQ8TCY9 931 aa18.91■□□□□ 0.62
AC055811.2-201ENST00000427497 HNRNPABQ99729 332 aaKnown RBP18.91■□□□□ 0.62
AC055811.2-201ENST00000427497 KANSL3Q9P2N6 904 aa18.91■□□□□ 0.62
AC055811.2-201ENST00000427497 INSL6Q9Y581 213 aa18.91■□□□□ 0.62
AC055811.2-201ENST00000427497 XIRP2A4UGR9 3374 aa18.9■□□□□ 0.62
AC055811.2-201ENST00000427497 LINC01553A4QN01 128 aa18.9■□□□□ 0.62
AC055811.2-201ENST00000427497 TULP2O00295 520 aa18.9■□□□□ 0.62
AC055811.2-201ENST00000427497 B4GALT3O60512 393 aa18.9■□□□□ 0.62
AC055811.2-201ENST00000427497 CYP11A1P05108 521 aa18.9■□□□□ 0.62
AC055811.2-201ENST00000427497 KRT3P12035 628 aa18.9■□□□□ 0.62
AC055811.2-201ENST00000427497 H2AFXP16104 143 aaPredicted RBP18.9■□□□□ 0.62
AC055811.2-201ENST00000427497 PTPN1P18031 435 aaKnown RBP18.9■□□□□ 0.62
AC055811.2-201ENST00000427497 RPL34P49207 117 aaKnown RBP18.9■□□□□ 0.62
AC055811.2-201ENST00000427497 BCAT1P54687 386 aa18.9■□□□□ 0.62
AC055811.2-201ENST00000427497 RNASE9P60153 205 aaKnown RBP18.9■□□□□ 0.62
AC055811.2-201ENST00000427497 PDE4CQ08493 712 aa18.9■□□□□ 0.62
AC055811.2-201ENST00000427497 BST2Q10589 180 aaKnown RBP18.9■□□□□ 0.62
AC055811.2-201ENST00000427497 KIAA0319Q5VV43 1072 aa18.9■□□□□ 0.62
AC055811.2-201ENST00000427497 PMF1Q6P1K2 205 aa18.9■□□□□ 0.62
AC055811.2-201ENST00000427497 TMEM110Q86TL2 294 aa18.9■□□□□ 0.62
AC055811.2-201ENST00000427497 CRIPAKQ8N1N5 446 aa18.9■□□□□ 0.62
AC055811.2-201ENST00000427497 FNIP1Q8TF40 1166 aa18.9■□□□□ 0.62
AC055811.2-201ENST00000427497 DDX43Q9NXZ2 648 aaKnown RBP18.9■□□□□ 0.62
AC055811.2-201ENST00000427497 THEGQ9P2T0 379 aa18.9■□□□□ 0.62
AC055811.2-201ENST00000427497 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 E5RJQ4 531 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 GOLGA8SH3BPF8 625 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 ATP2C2O75185 946 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 GABBR2O75899 941 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 DDHD2O94830 711 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 RHOXF2BP0C7M4 288 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 ODC1P11926 461 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 TKTP29401 623 aaKnown RBP18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 RFC1P35251 1148 aaPredicted RBP18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 TTC3P53804 2025 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 RWDD2BP57060 319 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 HTRA4P83105 476 aaPredicted RBP18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 ZNF211Q13398 564 aaPredicted RBP18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 PIGHQ14442 188 aaPredicted RBP18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 CLUL1Q15846 466 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 TJAP1Q5JTD0 557 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 ZNF280BQ86YH2 543 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 FUKQ8N0W3 1084 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 JOSD2Q8TAC2 188 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 SLC2A14Q8TDB8 520 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 ATXN2LQ8WWM7 1075 aaKnown RBP18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 RHOXF2Q9BQY4 288 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 PARD6BQ9BYG5 372 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 CYLDQ9NQC7 956 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 ST7Q9NRC1 585 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 TBC1D13Q9NVG8 400 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 TTC28Q96AY4 2481 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 TMEM189-UBE2V1I3L0A0 370 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 PSTPIP1O43586 416 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 LPXNO60711 386 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 ACAT1P24752 427 aaKnown RBP18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 ADORA2BP29275 332 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 BRCC3P46736 316 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 ERVK-21P61565 698 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 COLGALT2Q8IYK4 626 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 RSPH1Q8WYR4 309 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 TOP1MTQ969P6 601 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 SUSD3Q96L08 255 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 TGS1Q96RS0 853 aaKnown RBP18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 CRTAC1Q9NQ79 661 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 METTL5Q9NRN9 209 aaKnown RBP18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 RAB21Q9UL25 225 aa18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 TIMM13Q9Y5L4 95 aaPredicted RBP18.89■□□□□ 0.61
AC055811.2-201ENST00000427497 TARSL2A2RTX5 802 aaKnown RBP18.88■□□□□ 0.61
AC055811.2-201ENST00000427497 I3L4J1 428 aa18.88■□□□□ 0.61
AC055811.2-201ENST00000427497 FGGP02679 453 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms