RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 SLC25A11Q02978 314 aaKnown RBP15.15■□□□□ 0.02
CDK3-201ENST00000425876 MTFR1Q15390 333 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 TIGD5Q53EQ6 642 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 DAB2IPQ5VWQ8 1189 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 FUKQ8N0W3 1084 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 CASKIN2Q8WXE0 1202 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 SLCO2A1Q92959 643 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 CAVIN3Q969G5 261 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 LPIN3Q9BQK8 851 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 RNF208Q9H0X6 261 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 VIPAS39Q9H9C1 493 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 KANSL3Q9P2N6 904 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 CACNG4Q9UBN1 327 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 EFR3BQ9Y2G0 817 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 UTP11Q9Y3A2 253 aaKnown RBP15.15■□□□□ 0.02
CDK3-201ENST00000425876 TTI1O43156 1089 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 GABBR2O75899 941 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 SASH3O75995 380 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 B3GAT3O94766 335 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 COILP38432 576 aaPredicted RBP15.15■□□□□ 0.02
CDK3-201ENST00000425876 PTGIRP43119 386 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 CARSP49589 748 aaKnown RBP15.15■□□□□ 0.02
CDK3-201ENST00000425876 DRG2P55039 364 aaKnown RBP15.15■□□□□ 0.02
CDK3-201ENST00000425876 DSC1Q08554 894 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 CASP8Q14790 479 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 PLEKHG4Q58EX7 1191 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 CD300LGQ6UXG3 332 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 SLC26A9Q7LBE3 791 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 METTL23Q86XA0 190 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 CCDC50Q8IVM0 306 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 ARFGAP1Q8N6T3 406 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 EMC1Q8N766 993 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 URGCPQ8TCY9 931 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 KCTD13Q8WZ19 329 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 APBB2Q92870 758 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 SLITRK1Q96PX8 696 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 SYT15Q9BQS2 421 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 PAAF1Q9BRP4 392 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 FAM114A2Q9NRY5 505 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 TMEM161AQ9NX61 479 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 RASAL2Q9UJF2 1139 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 INPP5FQ9Y2H2 1132 aa15.15■□□□□ 0.02
CDK3-201ENST00000425876 ZSCAN5CA6NGD5 496 aaPredicted RBP15.14■□□□□ 0.01
CDK3-201ENST00000425876 TMEM189-UBE2V1I3L0A0 370 aa15.14■□□□□ 0.01
CDK3-201ENST00000425876 NBNO60934 754 aa15.14■□□□□ 0.01
CDK3-201ENST00000425876 PARNO95453 639 aaKnown RBP15.14■□□□□ 0.01
CDK3-201ENST00000425876 KRT1P04264 644 aa15.14■□□□□ 0.01
CDK3-201ENST00000425876 RALAP11233 206 aa15.14■□□□□ 0.01
CDK3-201ENST00000425876 TCF4P15884 667 aa15.14■□□□□ 0.01
CDK3-201ENST00000425876 PDGFRAP16234 1089 aa15.14■□□□□ 0.01
CDK3-201ENST00000425876 NPR3P17342 541 aa15.14■□□□□ 0.01
CDK3-201ENST00000425876 DESP17661 470 aa15.14■□□□□ 0.01
CDK3-201ENST00000425876 TYMPP19971 482 aa15.14■□□□□ 0.01
CDK3-201ENST00000425876 TKTP29401 623 aaKnown RBP15.14■□□□□ 0.01
CDK3-201ENST00000425876 SMC1AQ14683 1233 aaKnown RBP15.14■□□□□ 0.01
CDK3-201ENST00000425876 GPNMBQ14956 572 aa15.14■□□□□ 0.01
CDK3-201ENST00000425876 NOMO2Q5JPE7 1267 aa15.14■□□□□ 0.01
CDK3-201ENST00000425876 CLLU1OSQ5K130 101 aa15.14■□□□□ 0.01
CDK3-201ENST00000425876 CCDC137Q6PK04 289 aaKnown RBP15.14■□□□□ 0.01
CDK3-201ENST00000425876 PAQR9Q6ZVX9 377 aa15.14■□□□□ 0.01
CDK3-201ENST00000425876 ANKRD33Q7Z3H0 272 aa15.14■□□□□ 0.01
CDK3-201ENST00000425876 JAMLQ86YT9 394 aa15.14■□□□□ 0.01
CDK3-201ENST00000425876 RXFP2Q8WXD0 754 aa15.14■□□□□ 0.01
CDK3-201ENST00000425876 KHSRPQ92945 711 aaKnown RBP eCLIP15.14■□□□□ 0.01
CDK3-201ENST00000425876 SUSD3Q96L08 255 aa15.14■□□□□ 0.01
CDK3-201ENST00000425876 ACBD6Q9BR61 282 aa15.14■□□□□ 0.01
CDK3-201ENST00000425876 ERP44Q9BS26 406 aa15.14■□□□□ 0.01
CDK3-201ENST00000425876 CRTAC1Q9NQ79 661 aa15.14■□□□□ 0.01
CDK3-201ENST00000425876 FEZ2Q9UHY8 353 aaPredicted RBP15.14■□□□□ 0.01
CDK3-201ENST00000425876 TDRD15B5MCY1 1934 aaKnown RBP15.14■□□□□ 0.01
CDK3-201ENST00000425876 MKI67P46013 3256 aaKnown RBP15.13■□□□□ 0.01
CDK3-201ENST00000425876 ATP2C2O75185 946 aa15.13■□□□□ 0.01
CDK3-201ENST00000425876 ACAT1P24752 427 aaKnown RBP15.13■□□□□ 0.01
CDK3-201ENST00000425876 GBP1P32455 592 aa15.13■□□□□ 0.01
CDK3-201ENST00000425876 CCNG2Q16589 344 aa15.13■□□□□ 0.01
CDK3-201ENST00000425876 TAZQ16635 292 aa15.13■□□□□ 0.01
CDK3-201ENST00000425876 ATP13A4Q4VNC1 1196 aa15.13■□□□□ 0.01
CDK3-201ENST00000425876 ODF2Q5BJF6 829 aa15.13■□□□□ 0.01
CDK3-201ENST00000425876 MDH1BQ5I0G3 518 aa15.13■□□□□ 0.01
CDK3-201ENST00000425876 KIAA0319Q5VV43 1072 aa15.13■□□□□ 0.01
CDK3-201ENST00000425876 DUPD1Q68J44 220 aa15.13■□□□□ 0.01
CDK3-201ENST00000425876 TTC27Q6P3X3 843 aa15.13■□□□□ 0.01
CDK3-201ENST00000425876 MFSD7Q6UXD7 560 aa15.13■□□□□ 0.01
CDK3-201ENST00000425876 SPOCD1Q6ZMY3 1216 aa15.13■□□□□ 0.01
CDK3-201ENST00000425876 SYDE1Q6ZW31 735 aaPredicted RBP15.13■□□□□ 0.01
CDK3-201ENST00000425876 SCUBE3Q8IX30 993 aa15.13■□□□□ 0.01
CDK3-201ENST00000425876 CMASQ8NFW8 434 aaPredicted RBP15.13■□□□□ 0.01
CDK3-201ENST00000425876 MYCBPAPQ8TBZ2 947 aa15.13■□□□□ 0.01
CDK3-201ENST00000425876 RSPH1Q8WYR4 309 aa15.13■□□□□ 0.01
CDK3-201ENST00000425876 SEPT8Q92599 483 aa15.13■□□□□ 0.01
CDK3-201ENST00000425876 PIWIL1Q96J94 861 aaKnown RBP15.13■□□□□ 0.01
CDK3-201ENST00000425876 HINFPQ9BQA5 517 aa15.13■□□□□ 0.01
CDK3-201ENST00000425876 UBXN6Q9BZV1 441 aa15.13■□□□□ 0.01
CDK3-201ENST00000425876 DCLK3Q9C098 648 aa15.13■□□□□ 0.01
CDK3-201ENST00000425876 CRISPLD2Q9H0B8 497 aa15.13■□□□□ 0.01
CDK3-201ENST00000425876 ESYT3A0FGR9 886 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 ENPP3O14638 875 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 TJP3O95049 919 aa15.12■□□□□ 0.01
CDK3-201ENST00000425876 TRUB2O95900 331 aaKnown RBP15.12■□□□□ 0.01
CDK3-201ENST00000425876 FAM200BP0CF97 657 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms