RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 ARL14EPQ8N8R7 260 aaPredicted RBP19.5■□□□□ 0.71
SMARCAL1-205ENST00000425815 C12orf29Q8N999 325 aa19.5■□□□□ 0.71
SMARCAL1-205ENST00000425815 FAM3CQ92520 227 aa19.5■□□□□ 0.71
SMARCAL1-205ENST00000425815 GKN1Q9NS71 199 aa19.5■□□□□ 0.71
SMARCAL1-205ENST00000425815 CHMP5Q9NZZ3 219 aa19.5■□□□□ 0.71
SMARCAL1-205ENST00000425815 CACNA1HO95180 2353 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 ZNF840PA6NDX5 716 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 OTOL1A6NHN0 477 aaPredicted RBP19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 PROB1E7EW31 1015 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 TNFRSF10BO14763 440 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 KINO60870 393 aaKnown RBP19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 BEST1O76090 585 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 EPB41P11171 864 aaKnown RBP19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 ANXA13P27216 316 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 NBL1P41271 181 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 INCA1Q0VD86 236 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 MORC3Q14149 939 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 CBWD6Q4V339 395 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 CBWD3Q5JTY5 395 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 CBWD5Q5RIA9 395 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 TXNDC11Q6PKC3 985 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 FAM35AQ86V20 835 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 ZMIZ2Q8NF64 920 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 CSGALNACT1Q8TDX6 532 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 DHTKD1Q96HY7 919 aaPredicted RBP19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 TNIP3Q96KP6 325 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 SMOQ99835 787 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 DUSP9Q99956 384 aaKnown RBP19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 GTPBP4Q9BZE4 634 aaKnown RBP19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 TRPC7Q9HCX4 862 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 HPS4Q9NQG7 708 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 IL37Q9NZH6 218 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 NDRG2Q9UN36 371 aaKnown RBP19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 USP34Q70CQ2 3546 aa19.49■□□□□ 0.71
SMARCAL1-205ENST00000425815 COL4A2P08572 1712 aa19.48■□□□□ 0.71
SMARCAL1-205ENST00000425815 SLC16A3O15427 465 aaKnown RBP19.48■□□□□ 0.71
SMARCAL1-205ENST00000425815 CLSTN1O94985 981 aa19.48■□□□□ 0.71
SMARCAL1-205ENST00000425815 CHRNB1P11230 501 aa19.48■□□□□ 0.71
SMARCAL1-205ENST00000425815 CCDC130P13994 396 aa19.48■□□□□ 0.71
SMARCAL1-205ENST00000425815 RPS9P46781 194 aaKnown RBP19.48■□□□□ 0.71
SMARCAL1-205ENST00000425815 LRRC63Q05C16 580 aa19.48■□□□□ 0.71
SMARCAL1-205ENST00000425815 TAF10Q12962 218 aa19.48■□□□□ 0.71
SMARCAL1-205ENST00000425815 TRIM68Q6AZZ1 485 aa19.48■□□□□ 0.71
SMARCAL1-205ENST00000425815 CHFRQ96EP1 664 aa19.48■□□□□ 0.71
SMARCAL1-205ENST00000425815 TSG101Q99816 390 aa19.48■□□□□ 0.71
SMARCAL1-205ENST00000425815 RNF38Q9H0F5 515 aa19.48■□□□□ 0.71
SMARCAL1-205ENST00000425815 C8orf33Q9H7E9 229 aaPredicted RBP19.48■□□□□ 0.71
SMARCAL1-205ENST00000425815 CYP3A43Q9HB55 503 aa19.48■□□□□ 0.71
SMARCAL1-205ENST00000425815 RAB20Q9NX57 234 aa19.48■□□□□ 0.71
SMARCAL1-205ENST00000425815 MRPS17Q9Y2R5 130 aaKnown RBP19.48■□□□□ 0.71
SMARCAL1-205ENST00000425815 SPECC1L-ADORA2AF8WAN1 911 aa19.47■□□□□ 0.71
SMARCAL1-205ENST00000425815 CILPO75339 1184 aa19.47■□□□□ 0.71
SMARCAL1-205ENST00000425815 HDCP19113 662 aa19.47■□□□□ 0.71
SMARCAL1-205ENST00000425815 KPNA1P52294 538 aaPredicted RBP19.47■□□□□ 0.71
SMARCAL1-205ENST00000425815 PLCB2Q00722 1185 aa19.47■□□□□ 0.71
SMARCAL1-205ENST00000425815 ZNF77Q15935 545 aa19.47■□□□□ 0.71
SMARCAL1-205ENST00000425815 TTI2Q6NXR4 508 aa19.47■□□□□ 0.71
SMARCAL1-205ENST00000425815 FRMD5Q7Z6J6 570 aa19.47■□□□□ 0.71
SMARCAL1-205ENST00000425815 NUP93Q8N1F7 819 aa19.47■□□□□ 0.71
SMARCAL1-205ENST00000425815 SCAMP5Q8TAC9 235 aa19.47■□□□□ 0.71
SMARCAL1-205ENST00000425815 SLC2A14Q8TDB8 520 aa19.47■□□□□ 0.71
SMARCAL1-205ENST00000425815 TATDN2Q93075 761 aa19.47■□□□□ 0.71
SMARCAL1-205ENST00000425815 MED10Q9BTT4 135 aa19.47■□□□□ 0.71
SMARCAL1-205ENST00000425815 NIF3L1Q9GZT8 377 aa19.47■□□□□ 0.71
SMARCAL1-205ENST00000425815 KIF9Q9HAQ2 790 aa19.47■□□□□ 0.71
SMARCAL1-205ENST00000425815 LMAN1LQ9HAT1 526 aa19.47■□□□□ 0.71
SMARCAL1-205ENST00000425815 CSNK1G1Q9HCP0 422 aa19.47■□□□□ 0.71
SMARCAL1-205ENST00000425815 THG1LQ9NWX6 298 aaKnown RBP19.47■□□□□ 0.71
SMARCAL1-205ENST00000425815 TRPM5Q9NZQ8 1165 aa19.47■□□□□ 0.71
SMARCAL1-205ENST00000425815 COQ4Q9Y3A0 265 aa19.47■□□□□ 0.71
SMARCAL1-205ENST00000425815 TRAV19A0A0A6YYK7 116 aa19.46■□□□□ 0.71
SMARCAL1-205ENST00000425815 BIN1O00499 593 aa19.46■□□□□ 0.71
SMARCAL1-205ENST00000425815 NCAM2O15394 837 aa19.46■□□□□ 0.71
SMARCAL1-205ENST00000425815 USP17L7P0C7H9 530 aa19.46■□□□□ 0.71
SMARCAL1-205ENST00000425815 SP9P0CG40 484 aa19.46■□□□□ 0.71
SMARCAL1-205ENST00000425815 CTHP32929 405 aa19.46■□□□□ 0.71
SMARCAL1-205ENST00000425815 MXI1P50539 228 aa19.46■□□□□ 0.71
SMARCAL1-205ENST00000425815 FILIP1Q7Z7B0 1213 aa19.46■□□□□ 0.71
SMARCAL1-205ENST00000425815 FBXL13Q8NEE6 735 aa19.46■□□□□ 0.71
SMARCAL1-205ENST00000425815 SLC35C1Q96A29 364 aa19.46■□□□□ 0.71
SMARCAL1-205ENST00000425815 EBF3Q9H4W6 596 aa19.46■□□□□ 0.71
SMARCAL1-205ENST00000425815 FAM49BQ9NUQ9 324 aa19.46■□□□□ 0.71
SMARCAL1-205ENST00000425815 SPATA6Q9NWH7 488 aaPredicted RBP19.46■□□□□ 0.71
SMARCAL1-205ENST00000425815 PSMA7O14818 248 aa19.45■□□□□ 0.7
SMARCAL1-205ENST00000425815 STX10O60499 249 aa19.45■□□□□ 0.7
SMARCAL1-205ENST00000425815 AP1G2O75843 785 aa19.45■□□□□ 0.7
SMARCAL1-205ENST00000425815 OLFM2O95897 454 aa19.45■□□□□ 0.7
SMARCAL1-205ENST00000425815 ARSAP15289 507 aa19.45■□□□□ 0.7
SMARCAL1-205ENST00000425815 TCF3P15923 654 aa19.45■□□□□ 0.7
SMARCAL1-205ENST00000425815 CD58P19256 250 aa19.45■□□□□ 0.7
SMARCAL1-205ENST00000425815 YWHAQP27348 245 aa19.45■□□□□ 0.7
SMARCAL1-205ENST00000425815 MAGEA9P43362 315 aa19.45■□□□□ 0.7
SMARCAL1-205ENST00000425815 PPP3CCP48454 512 aa19.45■□□□□ 0.7
SMARCAL1-205ENST00000425815 PGFP49763 221 aa19.45■□□□□ 0.7
SMARCAL1-205ENST00000425815 UBE2HP62256 183 aa19.45■□□□□ 0.7
SMARCAL1-205ENST00000425815 USP4Q13107 963 aa19.45■□□□□ 0.7
SMARCAL1-205ENST00000425815 MTAPQ13126 283 aa19.45■□□□□ 0.7
SMARCAL1-205ENST00000425815 RUNX3Q13761 415 aa19.45■□□□□ 0.7
SMARCAL1-205ENST00000425815 GAS6Q14393 721 aa19.45■□□□□ 0.7
SMARCAL1-205ENST00000425815 RALGPS2Q86X27 583 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms