RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 LINC00597Q9H2U6 94 aa13.87□□□□□ -0.19
VRK3-203ENST00000424804 ECT2Q9H8V3 914 aa13.87□□□□□ -0.19
VRK3-203ENST00000424804 AGPAT3Q9NRZ7 376 aa13.87□□□□□ -0.19
VRK3-203ENST00000424804 ABCA7Q8IZY2 2146 aa13.87□□□□□ -0.19
VRK3-203ENST00000424804 CCDC163A0A0D9SF12 145 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 FAM237AA0A1B0GTK4 181 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 ZNF233A6NK53 670 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 SLC30A4O14863 429 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 TM4SF5O14894 197 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 KIAA0391O15091 583 aaKnown RBP13.86□□□□□ -0.19
VRK3-203ENST00000424804 CLSTN1O94985 981 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 TMEM191BP0C7N4 346 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 CHRM1P11229 460 aaPredicted RBP13.86□□□□□ -0.19
VRK3-203ENST00000424804 SDHBP21912 280 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 CACNA2D1P54289 1103 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 PSMC1P62191 440 aaKnown RBP13.86□□□□□ -0.19
VRK3-203ENST00000424804 MTF1Q14872 753 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 KNOP1Q1ED39 458 aaKnown RBP13.86□□□□□ -0.19
VRK3-203ENST00000424804 DUOXA2Q1HG44 320 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 PRR23CQ6ZRP0 262 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 TRAPPC11Q7Z392 1133 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 ARL14EPQ8N8R7 260 aaPredicted RBP13.86□□□□□ -0.19
VRK3-203ENST00000424804 KIAA0895Q8NCT3 520 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 PLEKHO2Q8TD55 490 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 OSCP1Q8WVF1 389 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 MYLPFQ96A32 169 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 SYT15Q9BQS2 421 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 MRPL45Q9BRJ2 306 aaKnown RBP13.86□□□□□ -0.19
VRK3-203ENST00000424804 UXTQ9UBK9 157 aaPredicted RBP13.86□□□□□ -0.19
VRK3-203ENST00000424804 CDH9Q9ULB4 789 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 RAB23Q9ULC3 237 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 CIZ1Q9ULV3 898 aaPredicted RBP13.86□□□□□ -0.19
VRK3-203ENST00000424804 MAPK8IP1Q9UQF2 711 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 R3HCC1Q9Y3T6 440 aaKnown RBP13.86□□□□□ -0.19
VRK3-203ENST00000424804 WNT6Q9Y6F9 365 aa13.86□□□□□ -0.19
VRK3-203ENST00000424804 CHD8Q9HCK8 2581 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 CACNA1BQ00975 2339 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 RNF40O75150 1001 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 MYL1P05976 194 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 PDGFRBP09619 1106 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 BDNFP23560 247 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 PCSK1P29120 753 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 GRSF1Q12849 480 aaKnown RBP eCLIP13.85□□□□□ -0.19
VRK3-203ENST00000424804 DPYDQ12882 1025 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 PSMD2Q13200 908 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 PNOCQ13519 176 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 PDGFRLQ15198 375 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 KBTBD6Q86V97 674 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 SPATA2LQ8IUW3 424 aaPredicted RBP13.85□□□□□ -0.19
VRK3-203ENST00000424804 WDR49Q8IV35 697 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 SCN4BQ8IWT1 228 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 GAB3Q8WWW8 586 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 PCED1BQ96HM7 432 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 ANKRD36BP1Q96IX9 119 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 TTLL2Q9BWV7 592 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 RNF38Q9H0F5 515 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 XYLT2Q9H1B5 865 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 RXFP3Q9NSD7 469 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 CHMP5Q9NZZ3 219 aa13.85□□□□□ -0.19
VRK3-203ENST00000424804 MAGEC2Q9UBF1 373 aaPredicted RBP13.85□□□□□ -0.19
VRK3-203ENST00000424804 CDV3Q9UKY7 258 aaKnown RBP13.85□□□□□ -0.19
VRK3-203ENST00000424804 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.84□□□□□ -0.19
VRK3-203ENST00000424804 EXOC3O60645 756 aa13.84□□□□□ -0.19
VRK3-203ENST00000424804 TACC1O75410 805 aa13.84□□□□□ -0.19
VRK3-203ENST00000424804 OLFM2O95897 454 aa13.84□□□□□ -0.19
VRK3-203ENST00000424804 FAM163BP0C2L3 166 aa13.84□□□□□ -0.19
VRK3-203ENST00000424804 USP17L7P0C7H9 530 aa13.84□□□□□ -0.19
VRK3-203ENST00000424804 DLATP10515 647 aaKnown RBP13.84□□□□□ -0.19
VRK3-203ENST00000424804 DRD1P21728 446 aa13.84□□□□□ -0.19
VRK3-203ENST00000424804 OPRD1P41143 372 aa13.84□□□□□ -0.19
VRK3-203ENST00000424804 PSMD6Q15008 389 aa13.84□□□□□ -0.19
VRK3-203ENST00000424804 SURF1Q15526 300 aa13.84□□□□□ -0.19
VRK3-203ENST00000424804 SNRNP35Q16560 246 aaKnown RBP13.84□□□□□ -0.19
VRK3-203ENST00000424804 PLA2G2CQ5R387 149 aa13.84□□□□□ -0.19
VRK3-203ENST00000424804 VSTM1Q6UX27 236 aa13.84□□□□□ -0.19
VRK3-203ENST00000424804 XXYLT1Q8NBI6 393 aa13.84□□□□□ -0.19
VRK3-203ENST00000424804 MYCBPAPQ8TBZ2 947 aa13.84□□□□□ -0.19
VRK3-203ENST00000424804 NETO1Q8TDF5 533 aa13.84□□□□□ -0.19
VRK3-203ENST00000424804 SH3RF2Q8TEC5 729 aa13.84□□□□□ -0.19
VRK3-203ENST00000424804 ERCC4Q92889 916 aaPredicted RBP13.84□□□□□ -0.19
VRK3-203ENST00000424804 CCDC127Q96BQ5 260 aa13.84□□□□□ -0.19
VRK3-203ENST00000424804 ZC3H10Q96K80 434 aaKnown RBP13.84□□□□□ -0.19
VRK3-203ENST00000424804 CNTNAP3BQ96NU0 1288 aa13.84□□□□□ -0.19
VRK3-203ENST00000424804 P2RY13Q9BPV8 354 aa13.84□□□□□ -0.19
VRK3-203ENST00000424804 CNTNAP3Q9BZ76 1288 aa13.84□□□□□ -0.19
VRK3-203ENST00000424804 TRPC7Q9HCX4 862 aa13.84□□□□□ -0.19
VRK3-203ENST00000424804 DUS2Q9NX74 493 aaKnown RBP13.84□□□□□ -0.19
VRK3-203ENST00000424804 ARHGAP26Q9UNA1 814 aa13.84□□□□□ -0.19
VRK3-203ENST00000424804 MAP1BP46821 2468 aaKnown RBP13.83□□□□□ -0.2
VRK3-203ENST00000424804 MYO18AQ92614 2054 aaKnown RBP13.83□□□□□ -0.2
VRK3-203ENST00000424804 TRAV19A0A0A6YYK7 116 aa13.83□□□□□ -0.2
VRK3-203ENST00000424804 K7EQS6 105 aa13.83□□□□□ -0.2
VRK3-203ENST00000424804 AXIN1O15169 862 aa13.83□□□□□ -0.2
VRK3-203ENST00000424804 GADD45BO75293 160 aaPredicted RBP13.83□□□□□ -0.2
VRK3-203ENST00000424804 EPN2O95208 641 aa13.83□□□□□ -0.2
VRK3-203ENST00000424804 TNNC2P02585 160 aa13.83□□□□□ -0.2
VRK3-203ENST00000424804 HDCP19113 662 aa13.83□□□□□ -0.2
VRK3-203ENST00000424804 TNNI1P19237 187 aa13.83□□□□□ -0.2
VRK3-203ENST00000424804 CYP24A1Q07973 514 aa13.83□□□□□ -0.2
VRK3-203ENST00000424804 MESP2Q0VG99 397 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms