RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 ESRRAP11474 423 aaPredicted RBP13.5□□□□□ -0.25
TOP2B-203ENST00000424225 STIP1P31948 543 aaKnown RBP13.5□□□□□ -0.25
TOP2B-203ENST00000424225 ELK3P41970 407 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 CRKP46108 304 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 NLRP11P59045 1033 aaKnown RBP13.5□□□□□ -0.25
TOP2B-203ENST00000424225 BMPR2Q13873 1038 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 CYP4A22Q5TCH4 519 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 SH3PXD2AQ5TCZ1 1133 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 FAM91A1Q658Y4 838 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 DRICH1Q6PGQ1 229 aaPredicted RBP13.5□□□□□ -0.25
TOP2B-203ENST00000424225 SCUBE1Q8IWY4 988 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 GRIN3AQ8TCU5 1115 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 MMADHCQ9H3L0 296 aaPredicted RBP13.5□□□□□ -0.25
TOP2B-203ENST00000424225 USP29Q9HBJ7 922 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 ZNF638Q14966 1978 aaKnown RBP13.49□□□□□ -0.25
TOP2B-203ENST00000424225 ZSCAN9O15535 394 aaPredicted RBP13.49□□□□□ -0.25
TOP2B-203ENST00000424225 MAGEC1O60732 1142 aa13.49□□□□□ -0.25
TOP2B-203ENST00000424225 FOSP01100 380 aaPredicted RBP13.49□□□□□ -0.25
TOP2B-203ENST00000424225 RABGAP1LQ5R372 815 aa13.49□□□□□ -0.25
TOP2B-203ENST00000424225 TRIM74Q86UV6 250 aa13.49□□□□□ -0.25
TOP2B-203ENST00000424225 TRIM73Q86UV7 250 aa13.49□□□□□ -0.25
TOP2B-203ENST00000424225 FAM172AQ8WUF8 416 aa13.49□□□□□ -0.25
TOP2B-203ENST00000424225 MCEEQ96PE7 176 aa13.49□□□□□ -0.25
TOP2B-203ENST00000424225 DNAAF2Q9NVR5 837 aaKnown RBP13.49□□□□□ -0.25
TOP2B-203ENST00000424225 MAP3K7O43318 606 aa13.49□□□□□ -0.25
TOP2B-203ENST00000424225 LMNAP02545 664 aaKnown RBP13.49□□□□□ -0.25
TOP2B-203ENST00000424225 GSTA2P09210 222 aa13.49□□□□□ -0.25
TOP2B-203ENST00000424225 YWHABP31946 246 aaKnown RBP13.49□□□□□ -0.25
TOP2B-203ENST00000424225 ALDH18A1P54886 795 aaKnown RBP13.49□□□□□ -0.25
TOP2B-203ENST00000424225 DSG1Q02413 1049 aa13.49□□□□□ -0.25
TOP2B-203ENST00000424225 SLC25A11Q02978 314 aaKnown RBP13.49□□□□□ -0.25
TOP2B-203ENST00000424225 HIF1AQ16665 826 aa13.49□□□□□ -0.25
TOP2B-203ENST00000424225 CHSY1Q86X52 802 aa13.49□□□□□ -0.25
TOP2B-203ENST00000424225 OR5B17Q8NGF7 314 aa13.49□□□□□ -0.25
TOP2B-203ENST00000424225 NR1H4Q96RI1 486 aaPredicted RBP13.49□□□□□ -0.25
TOP2B-203ENST00000424225 FAM213AQ9BRX8 229 aa13.49□□□□□ -0.25
TOP2B-203ENST00000424225 TRIM55Q9BYV6 548 aa13.49□□□□□ -0.25
TOP2B-203ENST00000424225 hCG_2014768A0A024R1R8 64 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 KBTBD13C9JR72 458 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 ENTPD3O75355 529 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 CST3P01034 146 aaPredicted RBP13.48□□□□□ -0.25
TOP2B-203ENST00000424225 PABPC4LP0CB38 370 aaKnown RBP13.48□□□□□ -0.25
TOP2B-203ENST00000424225 ADORA2AP29274 412 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 OTUD4Q01804 1114 aaKnown RBP13.48□□□□□ -0.25
TOP2B-203ENST00000424225 IKQ13123 557 aaPredicted RBP13.48□□□□□ -0.25
TOP2B-203ENST00000424225 VWA5B1Q5TIE3 1220 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 CYP4V2Q6ZWL3 525 aaPredicted RBP13.48□□□□□ -0.25
TOP2B-203ENST00000424225 MAP4K3Q8IVH8 894 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 JOSD2Q8TAC2 188 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 ACTL9Q8TC94 416 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 TFAP2BQ92481 460 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 NKD2Q969F2 451 aaPredicted RBP13.48□□□□□ -0.25
TOP2B-203ENST00000424225 NT5C1BQ96P26 610 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 OXCT2Q9BYC2 517 aaPredicted RBP13.48□□□□□ -0.25
TOP2B-203ENST00000424225 TTLL3Q9Y4R7 772 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 TEX264Q9Y6I9 313 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 PTPRFP10586 1907 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 LPXNO60711 386 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 ASLP04424 464 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 ITGAVP06756 1048 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 MAPTP10636 758 aaKnown RBP13.48□□□□□ -0.25
TOP2B-203ENST00000424225 GTF2H1P32780 548 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 PLOD1Q02809 727 aaPredicted RBP13.48□□□□□ -0.25
TOP2B-203ENST00000424225 FAM196AQ6ZSG2 479 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 ARID3BQ8IVW6 561 aaPredicted RBP13.48□□□□□ -0.25
TOP2B-203ENST00000424225 SPNS2Q8IVW8 549 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 ADGRF2Q8IZF7 708 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 ABRAQ8N0Z2 381 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 VPS52Q8N1B4 723 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 TTLL6Q8N841 843 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 SRPK1Q96SB4 655 aaKnown RBP13.48□□□□□ -0.25
TOP2B-203ENST00000424225 DBNDD1Q9H9R9 158 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 GALNT8Q9NY28 637 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 KCND2Q9NZV8 630 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 USP21Q9UK80 565 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 EMCNQ9ULC0 261 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 AK5Q9Y6K8 562 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 KIAA1217Q5T5P2 1943 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 SGK1O00141 431 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 TGDSO95455 350 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 SSR1P43307 286 aaKnown RBP13.48□□□□□ -0.25
TOP2B-203ENST00000424225 ACOT2P49753 483 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 AQP5P55064 265 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 CLDN10P78369 228 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 GCNT1Q02742 428 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 PDCD2Q16342 344 aaPredicted RBP13.48□□□□□ -0.25
TOP2B-203ENST00000424225 TMPRSS6Q8IU80 811 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 CPNE9Q8IYJ1 553 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 MXRA8Q9BRK3 442 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 MAGEB5Q9BZ81 275 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 ST6GALNAC4Q9H4F1 302 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 GINM1Q9NU53 330 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 NR2E3Q9Y5X4 410 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 FER1L6Q2WGJ9 1857 aa13.48□□□□□ -0.25
TOP2B-203ENST00000424225 SDR42E2A6NKP2 422 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 ZNF195O14628 629 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 SNNO75324 88 aaPredicted RBP13.47□□□□□ -0.25
TOP2B-203ENST00000424225 BAG2O95816 211 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 MMRN1Q13201 1228 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 TRMT10BQ6PF06 316 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms