RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 DNAL1Q4LDG9 190 aa15.91■□□□□ 0.14
C9orf3-204ENST00000424143 ZFYVE27Q5T4F4 411 aa15.91■□□□□ 0.14
C9orf3-204ENST00000424143 STXBP5Q5T5C0 1151 aa15.91■□□□□ 0.14
C9orf3-204ENST00000424143 ANGEL2Q5VTE6 544 aaKnown RBP15.91■□□□□ 0.14
C9orf3-204ENST00000424143 CWF19L1Q69YN2 538 aaKnown RBP15.91■□□□□ 0.14
C9orf3-204ENST00000424143 SWSAP1Q6NVH7 229 aa15.91■□□□□ 0.14
C9orf3-204ENST00000424143 TMEM154Q6P9G4 183 aa15.91■□□□□ 0.14
C9orf3-204ENST00000424143 RFWD3Q6PCD5 774 aa15.91■□□□□ 0.14
C9orf3-204ENST00000424143 KYAT3Q6YP21 454 aaKnown RBP15.91■□□□□ 0.14
C9orf3-204ENST00000424143 SLC26A11Q86WA9 606 aa15.91■□□□□ 0.14
C9orf3-204ENST00000424143 ARHGAP18Q8N392 663 aa15.91■□□□□ 0.14
C9orf3-204ENST00000424143 SCG3Q8WXD2 468 aaKnown RBP15.91■□□□□ 0.14
C9orf3-204ENST00000424143 STMN2Q93045 179 aa15.91■□□□□ 0.14
C9orf3-204ENST00000424143 LRRC39Q96DD0 335 aa15.91■□□□□ 0.14
C9orf3-204ENST00000424143 RTP4Q96DX8 246 aa15.91■□□□□ 0.14
C9orf3-204ENST00000424143 MTBPQ96DY7 904 aa15.91■□□□□ 0.14
C9orf3-204ENST00000424143 MSTO1Q9BUK6 570 aa15.91■□□□□ 0.14
C9orf3-204ENST00000424143 RSAD1Q9HA92 442 aa15.91■□□□□ 0.14
C9orf3-204ENST00000424143 JPH1Q9HDC5 661 aaPredicted RBP15.91■□□□□ 0.14
C9orf3-204ENST00000424143 SLC17A7Q9P2U7 560 aa15.91■□□□□ 0.14
C9orf3-204ENST00000424143 SLC9A2Q9UBY0 812 aa15.91■□□□□ 0.14
C9orf3-204ENST00000424143 DCTN4Q9UJW0 460 aa15.91■□□□□ 0.14
C9orf3-204ENST00000424143 IKBKGQ9Y6K9 419 aa15.91■□□□□ 0.14
C9orf3-204ENST00000424143 TESPA1A2RU30 521 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-204ENST00000424143 FCHO1O14526 889 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 BIRC5O15392 142 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 MAP3K7O43318 606 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 MED7O43513 233 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 CST8O60676 142 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 INHBAP08476 426 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 SUPT20HL2P0C7V6 817 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 SERPINB3P29508 390 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 RFC5P40937 340 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 ACOT2P49753 483 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 PAPOLAP51003 745 aaKnown RBP15.9■□□□□ 0.14
C9orf3-204ENST00000424143 RPL26P61254 145 aaKnown RBP15.9■□□□□ 0.14
C9orf3-204ENST00000424143 PTK7Q13308 1070 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 ZYXQ15942 572 aaKnown RBP15.9■□□□□ 0.14
C9orf3-204ENST00000424143 SUPT20HL1Q3ZLR7 823 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 TXNRD3NBQ6F5E7 133 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 LRRC6Q86X45 466 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 SLC4A11Q8NBS3 891 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 DEPTORQ8TB45 409 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 NSUN6Q8TEA1 469 aaKnown RBP15.9■□□□□ 0.14
C9orf3-204ENST00000424143 TEKT4Q8WW24 435 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 PTPRN2Q92932 1015 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 ELMO3Q96BJ8 720 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 STN1Q9H668 368 aaKnown RBP15.9■□□□□ 0.14
C9orf3-204ENST00000424143 KLHL11Q9NVR0 708 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 SIRPGQ9P1W8 387 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 SEPT9Q9UHD8 586 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-204ENST00000424143 XPO7Q9UIA9 1087 aaKnown RBP15.9■□□□□ 0.14
C9orf3-204ENST00000424143 TRPC5Q9UL62 973 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-204ENST00000424143 AGTPBP1Q9UPW5 1226 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 MAFBQ9Y5Q3 323 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-204ENST00000424143 PARP14Q460N5 1801 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 DOCK5Q9H7D0 1870 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 KIAA1217Q5T5P2 1943 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 A0A0G2JND7 137 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 CAPN9O14815 690 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 MCF2LO15068 1137 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 TBX10O75333 385 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 LRCH4O75427 683 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 TMEM63AO94886 807 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 C1QAP02745 245 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 SNRPAP09012 282 aaKnown RBP15.9■□□□□ 0.14
C9orf3-204ENST00000424143 PRKCHP24723 683 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 PSMA2P25787 234 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 ICAM3P32942 547 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 ACTR2P61160 394 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 KCNJ11Q14654 390 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 TBC1D10BQ4KMP7 808 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-204ENST00000424143 C6orf163Q5TEZ5 329 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 TMCO4Q5TGY1 634 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 LMBRD2Q68DH5 695 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-204ENST00000424143 GPAT2Q6NUI2 795 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 AAGABQ6PD74 315 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 RINLQ6ZS11 566 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 CYS1Q717R9 158 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 OR5B17Q8NGF7 314 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 NRG4Q8WWG1 115 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 ZNF184Q99676 751 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-204ENST00000424143 YIPF3Q9GZM5 350 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 WWP1Q9H0M0 922 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 FAM124BQ9H5Z6 455 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-204ENST00000424143 PAPOLBQ9NRJ5 636 aaKnown RBP15.9■□□□□ 0.14
C9orf3-204ENST00000424143 IL1RAPL1Q9NZN1 696 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 PLLPQ9Y342 182 aa15.9■□□□□ 0.14
C9orf3-204ENST00000424143 TCRBV9S1A1TA0A576 114 aa15.89■□□□□ 0.13
C9orf3-204ENST00000424143 CLRN2A0PK11 232 aa15.89■□□□□ 0.13
C9orf3-204ENST00000424143 H0Y3Z8 333 aa15.89■□□□□ 0.13
C9orf3-204ENST00000424143 I3L4J1 428 aa15.89■□□□□ 0.13
C9orf3-204ENST00000424143 FKBP6O75344 327 aa15.89■□□□□ 0.13
C9orf3-204ENST00000424143 KRT37O76014 449 aa15.89■□□□□ 0.13
C9orf3-204ENST00000424143 TM7SF2O76062 418 aa15.89■□□□□ 0.13
C9orf3-204ENST00000424143 PIM1P11309 404 aaPredicted RBP15.89■□□□□ 0.13
C9orf3-204ENST00000424143 KRT3P12035 628 aa15.89■□□□□ 0.13
C9orf3-204ENST00000424143 PGM1P36871 562 aa15.89■□□□□ 0.13
C9orf3-204ENST00000424143 EFNA5P52803 228 aa15.89■□□□□ 0.13
C9orf3-204ENST00000424143 SOX10P56693 466 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms