RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 ZSWIM4Q9H7M6 989 aa3.73□□□□□ -1.81
TOP2A-201ENST00000423485 HELLSQ9NRZ9 838 aa3.73□□□□□ -1.81
TOP2A-201ENST00000423485 OLA1Q9NTK5 396 aaKnown RBP3.73□□□□□ -1.81
TOP2A-201ENST00000423485 NYAP2Q9P242 653 aa3.73□□□□□ -1.81
TOP2A-201ENST00000423485 ARHGAP28Q9P2N2 729 aa3.73□□□□□ -1.81
TOP2A-201ENST00000423485 GABBR1Q9UBS5 961 aa3.73□□□□□ -1.81
TOP2A-201ENST00000423485 INTUQ9ULD6 942 aa3.73□□□□□ -1.81
TOP2A-201ENST00000423485 FAM227AF5H4B4 570 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 TRIM66O15016 1216 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 SMIM10L2AP0DMW4 78 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 SMIM10L2BP0DMW5 78 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 CYP2A6P11509 494 aaPredicted RBP3.72□□□□□ -1.81
TOP2A-201ENST00000423485 FGFR2P21802 821 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 RRM1P23921 792 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 SLC16A2P36021 539 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 TNFRSF4P43489 277 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 CAPZA2P47755 286 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 SARNPP82979 210 aaKnown RBP3.72□□□□□ -1.81
TOP2A-201ENST00000423485 OC90Q02509 493 aaPredicted RBP3.72□□□□□ -1.81
TOP2A-201ENST00000423485 ASPHQ12797 758 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 KRT81Q14533 505 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 LRRC26Q2I0M4 334 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 XKR3Q5GH77 459 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 RWDD4Q6NW29 188 aaKnown RBP3.72□□□□□ -1.81
TOP2A-201ENST00000423485 DCUN1D2Q6PH85 259 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 ZNF410Q86VK4 478 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 CD302Q8IX05 232 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 CLEC1AQ8NC01 280 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 OR14C36Q8NHC7 312 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 MAIP1Q8WWC4 291 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 CLIP3Q96DZ5 547 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 MTMR8Q96EF0 704 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 PNKPQ96T60 521 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 LRRC2Q9BYS8 371 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 ABCF3Q9NUQ8 709 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 CACNA2D2Q9NY47 1150 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 HS3ST3A1Q9Y663 406 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 TTC3P53804 2025 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 NRAPQ86VF7 1730 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 ARAP2Q8WZ64 1704 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 PNMA6FA0A0J9YX94 578 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 KERAO60938 352 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 RNASEH2AO75792 299 aaKnown RBP3.72□□□□□ -1.81
TOP2A-201ENST00000423485 CLIC3O95833 236 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 HMBSP08397 361 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 ZSCAN22P10073 491 aaPredicted RBP3.72□□□□□ -1.81
TOP2A-201ENST00000423485 BMP7P18075 431 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 HDCP19113 662 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 PTPN3P26045 913 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 GABRR2P28476 465 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 GRK3P35626 688 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 PGDP52209 483 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 SLC12A2P55011 1212 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 TTC38Q5R3I4 469 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 ARHGAP40Q5TG30 622 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 ANKRD54Q6NXT1 300 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 MRPL50Q8N5N7 158 aaKnown RBP3.72□□□□□ -1.81
TOP2A-201ENST00000423485 IQUBQ8NA54 791 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 DBF4BQ8NFT6 615 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 BPIFB1Q8TDL5 484 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 UCN3Q969E3 161 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 HAUS1Q96CS2 278 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 KLHDC7BQ96G42 594 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 ZSCAN31Q96LW9 406 aaPredicted RBP3.72□□□□□ -1.81
TOP2A-201ENST00000423485 CATSPER2Q96P56 530 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 TMEM175Q9BSA9 504 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 NDEL1Q9GZM8 345 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 DNAJC28Q9NX36 388 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 PSD3Q9NYI0 1048 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 SENP1Q9P0U3 644 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 LNPEPQ9UIQ6 1025 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 SLC39A10Q9ULF5 831 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 NOX1Q9Y5S8 564 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 ADGRA3Q8IWK6 1321 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 PRRC2BQ5JSZ5 2229 aaKnown RBP3.72□□□□□ -1.81
TOP2A-201ENST00000423485 AHDC1Q5TGY3 1603 aaPredicted RBP3.72□□□□□ -1.81
TOP2A-201ENST00000423485 NRXN2Q9P2S2 1712 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 HYKKA2RU49 373 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 SUPT3HB4E1H0 165 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 TULP2O00295 520 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 VWA5AO00534 786 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 NPC1O15118 1278 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 TIMM44O43615 452 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 TMCC1O94876 653 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 ESRRBO95718 433 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 ASS1P00966 412 aaKnown RBP3.72□□□□□ -1.81
TOP2A-201ENST00000423485 MYL1P05976 194 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 COL6A1P12109 1028 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 TIE1P35590 1138 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 SELENOVP59797 346 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 OCA2Q04671 838 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 SULT2A1Q06520 285 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 ZNF667Q5HYK9 610 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 TCHHL1Q5QJ38 904 aaPredicted RBP3.72□□□□□ -1.81
TOP2A-201ENST00000423485 DACT2Q5SW24 774 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 TSHZ3Q63HK5 1081 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 SLC9A4Q6AI14 798 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 INTS5Q6P9B9 1019 aaKnown RBP3.72□□□□□ -1.81
TOP2A-201ENST00000423485 TXNRD3Q86VQ6 643 aa3.72□□□□□ -1.81
TOP2A-201ENST00000423485 RNF149Q8NC42 400 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms