RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 TRPM5Q9NZQ8 1165 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 GCNT4Q9P109 453 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 CEP192Q8TEP8 1941 aa17.25■□□□□ 0.35
COL18A1-205ENST00000423214 PLXND1Q9Y4D7 1925 aa17.24■□□□□ 0.35
COL18A1-205ENST00000423214 GDF9O60383 454 aa17.24■□□□□ 0.35
COL18A1-205ENST00000423214 AKAP3O75969 853 aa17.24■□□□□ 0.35
COL18A1-205ENST00000423214 YEATS4O95619 227 aa17.24■□□□□ 0.35
COL18A1-205ENST00000423214 HDCP19113 662 aa17.24■□□□□ 0.35
COL18A1-205ENST00000423214 LMO2P25791 158 aa17.24■□□□□ 0.35
COL18A1-205ENST00000423214 EML3Q32P44 896 aa17.24■□□□□ 0.35
COL18A1-205ENST00000423214 MDH1BQ5I0G3 518 aa17.24■□□□□ 0.35
COL18A1-205ENST00000423214 FOXD4L5Q5VV16 416 aaPredicted RBP17.24■□□□□ 0.35
COL18A1-205ENST00000423214 IL31Q6EBC2 164 aa17.24■□□□□ 0.35
COL18A1-205ENST00000423214 DENND5BQ6ZUT9 1274 aa17.24■□□□□ 0.35
COL18A1-205ENST00000423214 HS2ST1Q7LGA3 356 aa17.24■□□□□ 0.35
COL18A1-205ENST00000423214 TRAPPC11Q7Z392 1133 aa17.24■□□□□ 0.35
COL18A1-205ENST00000423214 KBTBD6Q86V97 674 aa17.24■□□□□ 0.35
COL18A1-205ENST00000423214 HSCBQ8IWL3 235 aa17.24■□□□□ 0.35
COL18A1-205ENST00000423214 NELFCDQ8IXH7 590 aa17.24■□□□□ 0.35
COL18A1-205ENST00000423214 SPRYD3Q8NCJ5 442 aa17.24■□□□□ 0.35
COL18A1-205ENST00000423214 FOXD4L4Q8WXT5 416 aaPredicted RBP17.24■□□□□ 0.35
COL18A1-205ENST00000423214 PCED1BQ96HM7 432 aa17.24■□□□□ 0.35
COL18A1-205ENST00000423214 MAGEF1Q9HAY2 307 aa17.24■□□□□ 0.35
COL18A1-205ENST00000423214 FBRSL1Q9HCM7 1045 aaKnown RBP17.24■□□□□ 0.35
COL18A1-205ENST00000423214 ARHGAP26Q9UNA1 814 aa17.24■□□□□ 0.35
COL18A1-205ENST00000423214 MYO18AQ92614 2054 aaKnown RBP17.24■□□□□ 0.35
COL18A1-205ENST00000423214 ABCA7Q8IZY2 2146 aa17.23■□□□□ 0.35
COL18A1-205ENST00000423214 EPG5Q9HCE0 2579 aa17.23■□□□□ 0.35
COL18A1-205ENST00000423214 CUTAO60888 179 aa17.23■□□□□ 0.35
COL18A1-205ENST00000423214 APBB3O95704 486 aa17.23■□□□□ 0.35
COL18A1-205ENST00000423214 TCF3P15923 654 aa17.23■□□□□ 0.35
COL18A1-205ENST00000423214 PFKLP17858 780 aa17.23■□□□□ 0.35
COL18A1-205ENST00000423214 DMC1Q14565 340 aa17.23■□□□□ 0.35
COL18A1-205ENST00000423214 PSMD6Q15008 389 aa17.23■□□□□ 0.35
COL18A1-205ENST00000423214 SF3A2Q15428 464 aaKnown RBP17.23■□□□□ 0.35
COL18A1-205ENST00000423214 ELF2Q15723 593 aa17.23■□□□□ 0.35
COL18A1-205ENST00000423214 CCDC6Q16204 474 aa17.23■□□□□ 0.35
COL18A1-205ENST00000423214 SYT13Q7L8C5 426 aa17.23■□□□□ 0.35
COL18A1-205ENST00000423214 LIMS2Q7Z4I7 341 aa17.23■□□□□ 0.35
COL18A1-205ENST00000423214 XXYLT1Q8NBI6 393 aa17.23■□□□□ 0.35
COL18A1-205ENST00000423214 OR6B3Q8NGW1 331 aa17.23■□□□□ 0.35
COL18A1-205ENST00000423214 CCDC26Q8TAB7 109 aa17.23■□□□□ 0.35
COL18A1-205ENST00000423214 MYCBPAPQ8TBZ2 947 aa17.23■□□□□ 0.35
COL18A1-205ENST00000423214 ZNF507Q8TCN5 953 aa17.23■□□□□ 0.35
COL18A1-205ENST00000423214 DDX1Q92499 740 aaKnown RBP17.23■□□□□ 0.35
COL18A1-205ENST00000423214 CCDC127Q96BQ5 260 aa17.23■□□□□ 0.35
COL18A1-205ENST00000423214 CNTNAP3BQ96NU0 1288 aa17.23■□□□□ 0.35
COL18A1-205ENST00000423214 CNTNAP3Q9BZ76 1288 aa17.23■□□□□ 0.35
COL18A1-205ENST00000423214 TFIP11Q9UBB9 837 aaKnown RBP17.23■□□□□ 0.35
COL18A1-205ENST00000423214 MAP1BP46821 2468 aaKnown RBP17.23■□□□□ 0.35
COL18A1-205ENST00000423214 TNRC6BQ9UPQ9 1833 aaKnown RBP17.22■□□□□ 0.35
COL18A1-205ENST00000423214 CLIC2O15247 247 aa17.22■□□□□ 0.35
COL18A1-205ENST00000423214 HSP90AA1P07900 732 aaKnown RBP17.22■□□□□ 0.35
COL18A1-205ENST00000423214 ADRB1P08588 477 aa17.22■□□□□ 0.35
COL18A1-205ENST00000423214 HOXD13P35453 343 aa17.22■□□□□ 0.35
COL18A1-205ENST00000423214 RAP1GAPP47736 663 aa17.22■□□□□ 0.35
COL18A1-205ENST00000423214 CYP24A1Q07973 514 aa17.22■□□□□ 0.35
COL18A1-205ENST00000423214 TRPC3Q13507 836 aa17.22■□□□□ 0.35
COL18A1-205ENST00000423214 CNNM4Q6P4Q7 775 aa17.22■□□□□ 0.35
COL18A1-205ENST00000423214 UNC13DQ70J99 1090 aa17.22■□□□□ 0.35
COL18A1-205ENST00000423214 EPM2AIP1Q7L775 607 aaPredicted RBP17.22■□□□□ 0.35
COL18A1-205ENST00000423214 MRPL45Q9BRJ2 306 aaKnown RBP17.22■□□□□ 0.35
COL18A1-205ENST00000423214 ELOVL4Q9GZR5 314 aa17.22■□□□□ 0.35
COL18A1-205ENST00000423214 POLR3BQ9NW08 1133 aaPredicted RBP17.22■□□□□ 0.35
COL18A1-205ENST00000423214 PCDHGA5Q9Y5G8 931 aa17.22■□□□□ 0.35
COL18A1-205ENST00000423214 ATP8B3O60423 1300 aa17.21■□□□□ 0.35
COL18A1-205ENST00000423214 F8VP50 259 aa17.21■□□□□ 0.35
COL18A1-205ENST00000423214 LEFTY2O00292 366 aa17.21■□□□□ 0.35
COL18A1-205ENST00000423214 TGFB1I1O43294 461 aa17.21■□□□□ 0.35
COL18A1-205ENST00000423214 TACC1O75410 805 aa17.21■□□□□ 0.35
COL18A1-205ENST00000423214 ABL1P00519 1130 aa17.21■□□□□ 0.35
COL18A1-205ENST00000423214 ZNF806P0C7X5 589 aa17.21■□□□□ 0.35
COL18A1-205ENST00000423214 GNL1P36915 607 aaPredicted RBP17.21■□□□□ 0.35
COL18A1-205ENST00000423214 MPLP40238 635 aa17.21■□□□□ 0.35
COL18A1-205ENST00000423214 PPP3CCP48454 512 aa17.21■□□□□ 0.35
COL18A1-205ENST00000423214 DGKEP52429 567 aa17.21■□□□□ 0.35
COL18A1-205ENST00000423214 USP46P62068 366 aa17.21■□□□□ 0.35
COL18A1-205ENST00000423214 SNRPFP62306 86 aaKnown RBP17.21■□□□□ 0.35
COL18A1-205ENST00000423214 NOP14P78316 857 aaKnown RBP17.21■□□□□ 0.35
COL18A1-205ENST00000423214 IFRD2Q12894 506 aaPredicted RBP17.21■□□□□ 0.35
COL18A1-205ENST00000423214 WDR72Q3MJ13 1102 aa17.21■□□□□ 0.35
COL18A1-205ENST00000423214 SHC4Q6S5L8 630 aa17.21■□□□□ 0.35
COL18A1-205ENST00000423214 SLITRK1Q96PX8 696 aa17.21■□□□□ 0.35
COL18A1-205ENST00000423214 C7orf25Q9BPX7 421 aa17.21■□□□□ 0.35
COL18A1-205ENST00000423214 TTLL2Q9BWV7 592 aa17.21■□□□□ 0.35
COL18A1-205ENST00000423214 FAM13BQ9NYF5 915 aa17.21■□□□□ 0.35
COL18A1-205ENST00000423214 CHD8Q9HCK8 2581 aa17.2■□□□□ 0.34
COL18A1-205ENST00000423214 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.2■□□□□ 0.34
COL18A1-205ENST00000423214 A8MXQ7 604 aa17.2■□□□□ 0.34
COL18A1-205ENST00000423214 POLR2DO15514 142 aaKnown RBP17.2■□□□□ 0.34
COL18A1-205ENST00000423214 PHACTR2O75167 634 aa17.2■□□□□ 0.34
COL18A1-205ENST00000423214 RHOBTB1O94844 696 aa17.2■□□□□ 0.34
COL18A1-205ENST00000423214 GBP1P32455 592 aa17.2■□□□□ 0.34
COL18A1-205ENST00000423214 LIMK1P53667 647 aa17.2■□□□□ 0.34
COL18A1-205ENST00000423214 SEC13P55735 322 aa17.2■□□□□ 0.34
COL18A1-205ENST00000423214 FOXD4L6Q3SYB3 417 aaPredicted RBP17.2■□□□□ 0.34
COL18A1-205ENST00000423214 TDRD10Q5VZ19 366 aaKnown RBP17.2■□□□□ 0.34
COL18A1-205ENST00000423214 FOXD4L3Q6VB84 417 aaPredicted RBP17.2■□□□□ 0.34
COL18A1-205ENST00000423214 TSTD1Q8NFU3 115 aa17.2■□□□□ 0.34
COL18A1-205ENST00000423214 SCFD1Q8WVM8 642 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms