RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 C7orf26Q96N11 449 aa13.27□□□□□ -0.28
CTCFL-204ENST00000422869 CCDC106Q9BWC9 280 aa13.27□□□□□ -0.28
CTCFL-204ENST00000422869 IL1RAPL1Q9NZN1 696 aa13.27□□□□□ -0.28
CTCFL-204ENST00000422869 TAGLN3Q9UI15 199 aa13.27□□□□□ -0.28
CTCFL-204ENST00000422869 PCDHB4Q9Y5E5 795 aa13.27□□□□□ -0.28
CTCFL-204ENST00000422869 COMMD3-BMI1R4GMX3 469 aa13.27□□□□□ -0.28
CTCFL-204ENST00000422869 SRCAPQ6ZRS2 3230 aa13.27□□□□□ -0.28
CTCFL-204ENST00000422869 HNRNPDLO14979 420 aaKnown RBP13.27□□□□□ -0.29
CTCFL-204ENST00000422869 C4BPAP04003 597 aaKnown RBP13.27□□□□□ -0.29
CTCFL-204ENST00000422869 STIP1P31948 543 aaKnown RBP13.27□□□□□ -0.29
CTCFL-204ENST00000422869 GRIA2P42262 883 aa13.27□□□□□ -0.29
CTCFL-204ENST00000422869 ENPEPQ07075 957 aa13.27□□□□□ -0.29
CTCFL-204ENST00000422869 TKFCQ3LXA3 575 aa13.27□□□□□ -0.29
CTCFL-204ENST00000422869 RNF111Q6ZNA4 994 aa13.27□□□□□ -0.29
CTCFL-204ENST00000422869 PRPF39Q86UA1 669 aaKnown RBP13.27□□□□□ -0.29
CTCFL-204ENST00000422869 PDSS2Q86YH6 399 aa13.27□□□□□ -0.29
CTCFL-204ENST00000422869 MTBPQ96DY7 904 aa13.27□□□□□ -0.29
CTCFL-204ENST00000422869 SRPK1Q96SB4 655 aaKnown RBP13.27□□□□□ -0.29
CTCFL-204ENST00000422869 ZNF395Q9H8N7 513 aaPredicted RBP13.27□□□□□ -0.29
CTCFL-204ENST00000422869 ZWILCHQ9H900 591 aa13.27□□□□□ -0.29
CTCFL-204ENST00000422869 XPO7Q9UIA9 1087 aaKnown RBP13.27□□□□□ -0.29
CTCFL-204ENST00000422869 CPOXP36551 454 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 BST1Q10588 318 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 DNAL1Q4LDG9 190 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 KYAT3Q6YP21 454 aaKnown RBP13.26□□□□□ -0.29
CTCFL-204ENST00000422869 LDHDQ86WU2 507 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 ARID3BQ8IVW6 561 aaPredicted RBP13.26□□□□□ -0.29
CTCFL-204ENST00000422869 PDIK1LQ8N165 341 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 OR6Y1Q8NGX8 325 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 NTPCRQ9BSD7 190 aaKnown RBP13.26□□□□□ -0.29
CTCFL-204ENST00000422869 ZDHHC7Q9NXF8 308 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 SYNPO2Q9UMS6 1093 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 ARID2Q68CP9 1835 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 SPECC1L-ADORA2AF8WAN1 911 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 PABPC4LP0CB38 370 aaKnown RBP13.26□□□□□ -0.29
CTCFL-204ENST00000422869 PIM1P11309 404 aaPredicted RBP13.26□□□□□ -0.29
CTCFL-204ENST00000422869 TSHRP16473 764 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 ELK3P41970 407 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 HSD17B4P51659 736 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 ZNF200P98182 395 aaPredicted RBP13.26□□□□□ -0.29
CTCFL-204ENST00000422869 TEX44Q53QW1 395 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 CFAP157Q5JU67 520 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 C6orf163Q5TEZ5 329 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 FAM172AQ8WUF8 416 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 LMCD1Q9NZU5 365 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 PHF24Q9UPV7 400 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 CNTN6Q9UQ52 1028 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 A0A088AWK7 358 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.26□□□□□ -0.29
CTCFL-204ENST00000422869 KLRG2A4D1S0 409 aaPredicted RBP13.26□□□□□ -0.29
CTCFL-204ENST00000422869 KBTBD13C9JR72 458 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 FAM155BO75949 473 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 C1QAP02745 245 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 HARSP12081 509 aaKnown RBP13.26□□□□□ -0.29
CTCFL-204ENST00000422869 MRPS9P82933 396 aaKnown RBP13.26□□□□□ -0.29
CTCFL-204ENST00000422869 MAP3K10Q02779 954 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 ANO5Q75V66 913 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 TAS1R3Q7RTX0 852 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 ADGRG6Q86SQ4 1221 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 UNC45BQ8IWX7 931 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 ST13P4Q8IZP2 240 aaPredicted RBP13.26□□□□□ -0.29
CTCFL-204ENST00000422869 GSTCDQ8NEC7 633 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 OLFM3Q96PB7 478 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 C1orf21Q9H246 121 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 DDX56Q9NY93 547 aaKnown RBP13.26□□□□□ -0.29
CTCFL-204ENST00000422869 SCN9AQ15858 1988 aa13.26□□□□□ -0.29
CTCFL-204ENST00000422869 ZNF646O15015 1829 aaPredicted RBP13.25□□□□□ -0.29
CTCFL-204ENST00000422869 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 PRR5-ARHGAP8B1AHC4 643 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 CREB3O43889 395 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 INHBAP08476 426 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 TNNI1P19237 187 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 GARTP22102 1010 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 NRLP54845 237 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 MRPS5P82675 430 aaKnown RBP13.25□□□□□ -0.29
CTCFL-204ENST00000422869 ARHGAP8P85298 464 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 PDE1BQ01064 536 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 MSLNQ13421 630 aaPredicted RBP13.25□□□□□ -0.29
CTCFL-204ENST00000422869 GRM2Q14416 872 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 SPDYE2Q495Y8 402 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 SFT2D3Q587I9 215 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 FAM182BQ5T319 152 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 NIPA1Q7RTP0 329 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 SDCCAG8Q86SQ7 713 aaPredicted RBP13.25□□□□□ -0.29
CTCFL-204ENST00000422869 NAT14Q8WUY8 206 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 ACAP3Q96P50 834 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 C20orf27Q9GZN8 174 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 MARCOQ9UEW3 520 aaPredicted RBP13.25□□□□□ -0.29
CTCFL-204ENST00000422869 TMX2Q9Y320 296 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 IKBKGQ9Y6K9 419 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 UBR3Q6ZT12 1888 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 A6NJR5 290 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 MEI4A8MW99 385 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 I3L4J1 428 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 COPEO14579 308 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 FKBP6O75344 327 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 ALDH18A1P54886 795 aaKnown RBP13.25□□□□□ -0.29
CTCFL-204ENST00000422869 AQP5P55064 265 aa13.25□□□□□ -0.29
CTCFL-204ENST00000422869 MTMR1Q13613 665 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms