RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 WHAMMQ8TF30 809 aa28.03■■■□□ 2.08
CDK9-202ENST00000421939 IRF7Q92985 503 aa28.03■■■□□ 2.08
CDK9-202ENST00000421939 TATDN2Q93075 761 aa28.03■■■□□ 2.08
CDK9-202ENST00000421939 SHDQ96IW2 340 aa28.03■■■□□ 2.08
CDK9-202ENST00000421939 ARID3AQ99856 593 aa28.03■■■□□ 2.08
CDK9-202ENST00000421939 DNAI2Q9GZS0 605 aa28.03■■■□□ 2.08
CDK9-202ENST00000421939 SMG9Q9H0W8 520 aaKnown RBP28.03■■■□□ 2.08
CDK9-202ENST00000421939 STK25O00506 426 aa28.02■■■□□ 2.08
CDK9-202ENST00000421939 PMM2O15305 246 aa28.02■■■□□ 2.08
CDK9-202ENST00000421939 AOC1P19801 751 aa28.02■■■□□ 2.08
CDK9-202ENST00000421939 PRKCQQ04759 706 aa28.02■■■□□ 2.08
CDK9-202ENST00000421939 FCHO2Q0JRZ9 810 aa28.02■■■□□ 2.08
CDK9-202ENST00000421939 SLC44A4Q53GD3 710 aa28.02■■■□□ 2.08
CDK9-202ENST00000421939 PHLDB3Q6NSJ2 640 aa28.02■■■□□ 2.08
CDK9-202ENST00000421939 KCNH6Q9H252 994 aa28.02■■■□□ 2.08
CDK9-202ENST00000421939 FAM124BQ9H5Z6 455 aaPredicted RBP28.02■■■□□ 2.08
CDK9-202ENST00000421939 TRPC7Q9HCX4 862 aa28.02■■■□□ 2.08
CDK9-202ENST00000421939 CISHQ9NSE2 258 aa28.02■■■□□ 2.08
CDK9-202ENST00000421939 ARIH1Q9Y4X5 557 aaPredicted RBP28.02■■■□□ 2.08
CDK9-202ENST00000421939 ZNF263O14978 683 aa28.01■■■□□ 2.07
CDK9-202ENST00000421939 CCDC192P0DO97 292 aa28.01■■■□□ 2.07
CDK9-202ENST00000421939 STARD6P59095 220 aa28.01■■■□□ 2.07
CDK9-202ENST00000421939 NUP93Q8N1F7 819 aa28.01■■■□□ 2.07
CDK9-202ENST00000421939 LRRC3BQ96PB8 259 aa28.01■■■□□ 2.07
CDK9-202ENST00000421939 KCNK16Q96T55 309 aa28.01■■■□□ 2.07
CDK9-202ENST00000421939 COL4A2P08572 1712 aa28.01■■■□□ 2.07
CDK9-202ENST00000421939 CETN1Q12798 172 aa28■■■□□ 2.07
CDK9-202ENST00000421939 CUL2Q13617 745 aa28■■■□□ 2.07
CDK9-202ENST00000421939 DPCR1Q3MIW9 517 aa28■■■□□ 2.07
CDK9-202ENST00000421939 ZNF394Q53GI3 561 aa28■■■□□ 2.07
CDK9-202ENST00000421939 CELF5Q8N6W0 485 aaKnown RBP28■■■□□ 2.07
CDK9-202ENST00000421939 GPT2Q8TD30 523 aa28■■■□□ 2.07
CDK9-202ENST00000421939 MED15Q96RN5 788 aa28■■■□□ 2.07
CDK9-202ENST00000421939 HNRNPABQ99729 332 aaKnown RBP28■■■□□ 2.07
CDK9-202ENST00000421939 KIF9Q9HAQ2 790 aa28■■■□□ 2.07
CDK9-202ENST00000421939 TRPV5Q9NQA5 729 aa28■■■□□ 2.07
CDK9-202ENST00000421939 TRPM5Q9NZQ8 1165 aa28■■■□□ 2.07
CDK9-202ENST00000421939 UTP18Q9Y5J1 556 aaKnown RBP eCLIP28■■■□□ 2.07
CDK9-202ENST00000421939 TRAV19A0A0A6YYK7 116 aa27.99■■■□□ 2.07
CDK9-202ENST00000421939 CHADO15335 359 aa27.99■■■□□ 2.07
CDK9-202ENST00000421939 P4HA2O15460 535 aa27.99■■■□□ 2.07
CDK9-202ENST00000421939 RTN3O95197 1032 aaPredicted RBP27.99■■■□□ 2.07
CDK9-202ENST00000421939 FAM200BP0CF97 657 aa27.99■■■□□ 2.07
CDK9-202ENST00000421939 ADORA2BP29275 332 aa27.99■■■□□ 2.07
CDK9-202ENST00000421939 IFRD2Q12894 506 aaPredicted RBP27.99■■■□□ 2.07
CDK9-202ENST00000421939 BPIFB1Q8TDL5 484 aa27.99■■■□□ 2.07
CDK9-202ENST00000421939 USP13Q92995 863 aaPredicted RBP27.99■■■□□ 2.07
CDK9-202ENST00000421939 CYFIP2Q96F07 1278 aa27.99■■■□□ 2.07
CDK9-202ENST00000421939 SMOQ99835 787 aa27.99■■■□□ 2.07
CDK9-202ENST00000421939 DDX23Q9BUQ8 820 aaKnown RBP27.99■■■□□ 2.07
CDK9-202ENST00000421939 CSNK1G1Q9HCP0 422 aa27.99■■■□□ 2.07
CDK9-202ENST00000421939 HEBP1Q9NRV9 189 aa27.99■■■□□ 2.07
CDK9-202ENST00000421939 CCL26Q9Y258 94 aa27.99■■■□□ 2.07
CDK9-202ENST00000421939 COL4A3Q01955 1670 aa27.99■■■□□ 2.07
CDK9-202ENST00000421939 ZNF638Q14966 1978 aaKnown RBP27.99■■■□□ 2.07
CDK9-202ENST00000421939 ANAPC1Q9H1A4 1944 aa27.98■■■□□ 2.07
CDK9-202ENST00000421939 C2orf78A6NCI8 922 aa27.98■■■□□ 2.07
CDK9-202ENST00000421939 ARNTLO00327 626 aa27.98■■■□□ 2.07
CDK9-202ENST00000421939 PI15O43692 258 aa27.98■■■□□ 2.07
CDK9-202ENST00000421939 CKMP06732 381 aa27.98■■■□□ 2.07
CDK9-202ENST00000421939 PPP3CCP48454 512 aa27.98■■■□□ 2.07
CDK9-202ENST00000421939 SLC5A3P53794 718 aa27.98■■■□□ 2.07
CDK9-202ENST00000421939 KCNH2Q12809 1159 aa27.98■■■□□ 2.07
CDK9-202ENST00000421939 LRMPQ12912 555 aa27.98■■■□□ 2.07
CDK9-202ENST00000421939 TAF10Q12962 218 aa27.98■■■□□ 2.07
CDK9-202ENST00000421939 ZNF268Q14587 947 aaPredicted RBP27.98■■■□□ 2.07
CDK9-202ENST00000421939 TPRG1Q6ZUI0 275 aa27.98■■■□□ 2.07
CDK9-202ENST00000421939 ZMIZ2Q8NF64 920 aa27.98■■■□□ 2.07
CDK9-202ENST00000421939 CNOT6LQ96LI5 555 aaKnown RBP27.98■■■□□ 2.07
CDK9-202ENST00000421939 NT5C1BQ96P26 610 aa27.98■■■□□ 2.07
CDK9-202ENST00000421939 SLITRK1Q96PX8 696 aa27.98■■■□□ 2.07
CDK9-202ENST00000421939 PRRX2Q99811 253 aa27.98■■■□□ 2.07
CDK9-202ENST00000421939 FOXQ1Q9C009 403 aa27.98■■■□□ 2.07
CDK9-202ENST00000421939 TDP1Q9NUW8 608 aa27.98■■■□□ 2.07
CDK9-202ENST00000421939 TICRRQ7Z2Z1 1910 aa27.98■■■□□ 2.07
CDK9-202ENST00000421939 TNFRSF10BO14763 440 aa27.97■■■□□ 2.07
CDK9-202ENST00000421939 AFPP02771 609 aaKnown RBP27.97■■■□□ 2.07
CDK9-202ENST00000421939 TBXAS1P24557 533 aaPredicted RBP27.97■■■□□ 2.07
CDK9-202ENST00000421939 YWHAQP27348 245 aa27.97■■■□□ 2.07
CDK9-202ENST00000421939 NUBP1P53384 320 aa27.97■■■□□ 2.07
CDK9-202ENST00000421939 MAP3K7CLP57077 242 aa27.97■■■□□ 2.07
CDK9-202ENST00000421939 YWHAEP62258 255 aaKnown RBP27.97■■■□□ 2.07
CDK9-202ENST00000421939 ARHGAP29Q52LW3 1261 aa27.97■■■□□ 2.07
CDK9-202ENST00000421939 SLC22A12Q96S37 553 aa27.97■■■□□ 2.07
CDK9-202ENST00000421939 GCNT4Q9P109 453 aa27.97■■■□□ 2.07
CDK9-202ENST00000421939 DACH1Q9UI36 760 aa27.97■■■□□ 2.07
CDK9-202ENST00000421939 PATJQ8NI35 1801 aa27.97■■■□□ 2.07
CDK9-202ENST00000421939 KIF26AQ9ULI4 1882 aaPredicted RBP27.96■■■□□ 2.07
CDK9-202ENST00000421939 KANSL1LA0AUZ9 987 aa27.96■■■□□ 2.07
CDK9-202ENST00000421939 ZNF840PA6NDX5 716 aa27.96■■■□□ 2.07
CDK9-202ENST00000421939 BEST1O76090 585 aa27.96■■■□□ 2.07
CDK9-202ENST00000421939 USP17L7P0C7H9 530 aa27.96■■■□□ 2.07
CDK9-202ENST00000421939 PDE6CP51160 858 aa27.96■■■□□ 2.07
CDK9-202ENST00000421939 RAD23BP54727 409 aa27.96■■■□□ 2.07
CDK9-202ENST00000421939 SLC4A11Q8NBS3 891 aa27.96■■■□□ 2.07
CDK9-202ENST00000421939 PDZD8Q8NEN9 1154 aa27.96■■■□□ 2.07
CDK9-202ENST00000421939 PRSS33Q8NF86 280 aa27.96■■■□□ 2.07
CDK9-202ENST00000421939 PJA1Q8NG27 643 aa27.96■■■□□ 2.07
CDK9-202ENST00000421939 SCAMP5Q8TAC9 235 aa27.96■■■□□ 2.07
CDK9-202ENST00000421939 CSGALNACT1Q8TDX6 532 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms