RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 PTPRDP23468 1912 aa16.68■□□□□ 0.26
BRAT1-202ENST00000421712 MYO10Q9HD67 2058 aa16.68■□□□□ 0.26
BRAT1-202ENST00000421712 RNF225M0QZC1 329 aaPredicted RBP16.68■□□□□ 0.26
BRAT1-202ENST00000421712 MOSPD3O75425 235 aa16.68■□□□□ 0.26
BRAT1-202ENST00000421712 BEST1O76090 585 aa16.68■□□□□ 0.26
BRAT1-202ENST00000421712 ABL1P00519 1130 aa16.68■□□□□ 0.26
BRAT1-202ENST00000421712 ASGR2P07307 311 aa16.68■□□□□ 0.26
BRAT1-202ENST00000421712 PAEPP09466 180 aa16.68■□□□□ 0.26
BRAT1-202ENST00000421712 CYP4F8P98187 520 aa16.68■□□□□ 0.26
BRAT1-202ENST00000421712 RAPGEF1Q13905 1077 aa16.68■□□□□ 0.26
BRAT1-202ENST00000421712 IQCB1Q15051 598 aa16.68■□□□□ 0.26
BRAT1-202ENST00000421712 GOLGA7BQ2TAP0 167 aa16.68■□□□□ 0.26
BRAT1-202ENST00000421712 ARHGAP17Q68EM7 881 aa16.68■□□□□ 0.26
BRAT1-202ENST00000421712 MTSS1LQ765P7 747 aa16.68■□□□□ 0.26
BRAT1-202ENST00000421712 UBR7Q8N806 425 aa16.68■□□□□ 0.26
BRAT1-202ENST00000421712 MRPS31Q92665 395 aaKnown RBP16.68■□□□□ 0.26
BRAT1-202ENST00000421712 DUSP16Q9BY84 665 aa16.68■□□□□ 0.26
BRAT1-202ENST00000421712 GPR88Q9GZN0 384 aa16.68■□□□□ 0.26
BRAT1-202ENST00000421712 HSD3B7Q9H2F3 369 aa16.68■□□□□ 0.26
BRAT1-202ENST00000421712 TSPY26PQ9H489 355 aa16.68■□□□□ 0.26
BRAT1-202ENST00000421712 SIX2Q9NPC8 291 aa16.68■□□□□ 0.26
BRAT1-202ENST00000421712 TMEM30AQ9NV96 361 aa16.68■□□□□ 0.26
BRAT1-202ENST00000421712 MUTYHQ9UIF7 546 aa16.68■□□□□ 0.26
BRAT1-202ENST00000421712 LRRC10BA6NIK2 292 aa16.67■□□□□ 0.26
BRAT1-202ENST00000421712 LGALS16A8MUM7 142 aa16.67■□□□□ 0.26
BRAT1-202ENST00000421712 NRG2O14511 850 aaPredicted RBP16.67■□□□□ 0.26
BRAT1-202ENST00000421712 RTN3O95197 1032 aaPredicted RBP16.67■□□□□ 0.26
BRAT1-202ENST00000421712 SERPINC1P01008 464 aa16.67■□□□□ 0.26
BRAT1-202ENST00000421712 NPR3P17342 541 aa16.67■□□□□ 0.26
BRAT1-202ENST00000421712 YWHAQP27348 245 aa16.67■□□□□ 0.26
BRAT1-202ENST00000421712 USP46P62068 366 aa16.67■□□□□ 0.26
BRAT1-202ENST00000421712 KLHDC7AQ5VTJ3 777 aa16.67■□□□□ 0.26
BRAT1-202ENST00000421712 CLEC20AQ6ZU45 233 aa16.67■□□□□ 0.26
BRAT1-202ENST00000421712 RSAD2Q8WXG1 361 aa16.67■□□□□ 0.26
BRAT1-202ENST00000421712 TRMT2BQ96GJ1 504 aaKnown RBP16.67■□□□□ 0.26
BRAT1-202ENST00000421712 MYRFLQ96LU7 910 aa16.67■□□□□ 0.26
BRAT1-202ENST00000421712 ZSWIM3Q96MP5 696 aa16.67■□□□□ 0.26
BRAT1-202ENST00000421712 SLITRK1Q96PX8 696 aa16.67■□□□□ 0.26
BRAT1-202ENST00000421712 KCNK12Q9HB15 430 aa16.67■□□□□ 0.26
BRAT1-202ENST00000421712 IL21Q9HBE4 155 aa16.67■□□□□ 0.26
BRAT1-202ENST00000421712 TRPC7Q9HCX4 862 aa16.67■□□□□ 0.26
BRAT1-202ENST00000421712 IGSF9Q9P2J2 1179 aa16.67■□□□□ 0.26
BRAT1-202ENST00000421712 DOCK8Q8NF50 2099 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 VCANP13611 3396 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 CALCAP01258 141 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 F11P03951 625 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 BRD2P25440 801 aaKnown RBP16.66■□□□□ 0.26
BRAT1-202ENST00000421712 KLK7P49862 253 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 SLC5A3P53794 718 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 TAF10Q12962 218 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 SYCP1Q15431 976 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 STXBP5Q5T5C0 1151 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 LRSAM1Q6UWE0 723 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 PARM1Q6UWI2 310 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 GPIHBP1Q8IV16 184 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 MAB21L3Q8N8X9 362 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 ANKRD52Q8NB46 1076 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 ZMIZ2Q8NF64 920 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 SCAMP5Q8TAC9 235 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 UBA3Q8TBC4 463 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 ZSCAN18Q8TBC5 510 aaPredicted RBP16.66■□□□□ 0.26
BRAT1-202ENST00000421712 FBXO32Q969P5 355 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 NXPE3Q969Y0 559 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 TASP1Q9H6P5 420 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 ZFP14Q9HCL3 533 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 CSNK1G1Q9HCP0 422 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 FAM207AQ9NSI2 230 aaPredicted RBP16.66■□□□□ 0.26
BRAT1-202ENST00000421712 TRPM5Q9NZQ8 1165 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 TSPAN16Q9UKR8 245 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 FHOD1Q9Y613 1164 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 NUMBLQ9Y6R0 609 aa16.66■□□□□ 0.26
BRAT1-202ENST00000421712 DPYSL4O14531 572 aa16.65■□□□□ 0.26
BRAT1-202ENST00000421712 THAP12O43422 761 aa16.65■□□□□ 0.26
BRAT1-202ENST00000421712 MED7O43513 233 aa16.65■□□□□ 0.26
BRAT1-202ENST00000421712 UCHL3P15374 230 aa16.65■□□□□ 0.26
BRAT1-202ENST00000421712 DRAP1Q14919 205 aaPredicted RBP16.65■□□□□ 0.26
BRAT1-202ENST00000421712 STILQ15468 1287 aa16.65■□□□□ 0.26
BRAT1-202ENST00000421712 FAM78AQ5JUQ0 283 aa16.65■□□□□ 0.26
BRAT1-202ENST00000421712 TXNDC8Q6A555 127 aa16.65■□□□□ 0.26
BRAT1-202ENST00000421712 NEK11Q8NG66 645 aa16.65■□□□□ 0.26
BRAT1-202ENST00000421712 TFAP2BQ92481 460 aa16.65■□□□□ 0.26
BRAT1-202ENST00000421712 SMARCD2Q92925 531 aa16.65■□□□□ 0.26
BRAT1-202ENST00000421712 KXD1Q9BQD3 176 aa16.65■□□□□ 0.26
BRAT1-202ENST00000421712 FBXO44Q9H4M3 255 aa16.65■□□□□ 0.26
BRAT1-202ENST00000421712 CHORDC1Q9UHD1 332 aaPredicted RBP16.65■□□□□ 0.26
BRAT1-202ENST00000421712 AJAP1Q9UKB5 411 aaPredicted RBP16.65■□□□□ 0.26
BRAT1-202ENST00000421712 ANHXE9PGG2 379 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 M0QYV0 167 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 O00370 1275 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 FOXN3O00409 490 aaPredicted RBP16.64■□□□□ 0.25
BRAT1-202ENST00000421712 TNFRSF10BO14763 440 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 CYP26A1O43174 497 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 DCXO43602 365 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 ALADP13716 330 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 RFX1P22670 979 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 DDX6P26196 483 aaKnown RBP eCLIP16.64■□□□□ 0.25
BRAT1-202ENST00000421712 GNA15P30679 374 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 AVPR1AP37288 418 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 PPP3CCP48454 512 aa16.64■□□□□ 0.25
BRAT1-202ENST00000421712 ZNF132P52740 706 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms