RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 CYP39A1Q9NYL5 469 aa15.39■□□□□ 0.05
AP000550.1-201ENST00000420508 TNFSF13BQ9Y275 285 aa15.39■□□□□ 0.05
AP000550.1-201ENST00000420508 SLCO1B7G3V0H7 640 aa15.39■□□□□ 0.05
AP000550.1-201ENST00000420508 PYGMP11217 842 aa15.39■□□□□ 0.05
AP000550.1-201ENST00000420508 CLCN3P51790 818 aa15.39■□□□□ 0.05
AP000550.1-201ENST00000420508 SLC7A14Q8TBB6 771 aa15.39■□□□□ 0.05
AP000550.1-201ENST00000420508 ZNF446Q9NWS9 450 aa15.39■□□□□ 0.05
AP000550.1-201ENST00000420508 ARHGEF38Q9NXL2 777 aa15.39■□□□□ 0.05
AP000550.1-201ENST00000420508 PHTF1Q9UMS5 762 aa15.39■□□□□ 0.05
AP000550.1-201ENST00000420508 PCDHB8Q9UN66 801 aa15.39■□□□□ 0.05
AP000550.1-201ENST00000420508 MAGED2Q9UNF1 606 aaPredicted RBP15.39■□□□□ 0.05
AP000550.1-201ENST00000420508 REXO2Q9Y3B8 237 aaKnown RBP15.39■□□□□ 0.05
AP000550.1-201ENST00000420508 SMIM22K7EJ46 135 aa15.39■□□□□ 0.05
AP000550.1-201ENST00000420508 GNGT2O14610 69 aa15.39■□□□□ 0.05
AP000550.1-201ENST00000420508 RARBP10826 455 aa15.39■□□□□ 0.05
AP000550.1-201ENST00000420508 CPB1P15086 417 aa15.39■□□□□ 0.05
AP000550.1-201ENST00000420508 DDX5P17844 614 aaKnown RBP15.39■□□□□ 0.05
AP000550.1-201ENST00000420508 SMTNL2Q2TAL5 461 aa15.39■□□□□ 0.05
AP000550.1-201ENST00000420508 SLFN11Q7Z7L1 901 aa15.39■□□□□ 0.05
AP000550.1-201ENST00000420508 PTPRN2Q92932 1015 aa15.39■□□□□ 0.05
AP000550.1-201ENST00000420508 THOC1Q96FV9 657 aaKnown RBP15.39■□□□□ 0.05
AP000550.1-201ENST00000420508 TRIM49D1C9J1S8 452 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 PMM2O15305 246 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 TGFB1I1O43294 461 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 MAFO75444 373 aaPredicted RBP15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 PDGFRBP09619 1106 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 RPL21P46778 160 aaKnown RBP15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 SERPINB8P50452 374 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 PPIL2Q13356 520 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 RRP1BQ14684 758 aaKnown RBP15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 ARSHQ5FYA8 562 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 SLC27A1Q6PCB7 646 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 NLRP9Q7RTR0 991 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 PDZD8Q8NEN9 1154 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 LNX1Q8TBB1 728 aaPredicted RBP15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 FAM172AQ8WUF8 416 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 TRIM54Q9BYV2 358 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 SIK2Q9H0K1 926 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 ATP9BO43861 1147 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 KBTBD12Q3ZCT8 623 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 ATG4AQ8WYN0 398 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 DNAJC18Q9H819 358 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 PCMTD2Q9NV79 361 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 HACD3Q9P035 362 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 WTIPA6NIX2 430 aaPredicted RBP15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 TRPC5OSA6NMA1 111 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 APOC4-APOC2K7ER74 178 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 WNT7AO00755 349 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 TRDMT1O14717 391 aaKnown RBP15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 APOC2P02655 101 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 KRT4P19013 534 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 LONP2Q86WA8 852 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 ATP6V0D2Q8N8Y2 350 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 OR6P1Q8NGX9 317 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 BAZ2BQ9UIF8 2168 aaKnown RBP15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 ATRNL1Q5VV63 1379 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 KITP10721 976 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 ICA1LQ8NDH6 482 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 FAXDC2Q96IV6 333 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 PAFAH2Q99487 392 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 KIF9Q9HAQ2 790 aa15.38■□□□□ 0.05
AP000550.1-201ENST00000420508 C6orf222P0C671 652 aaPredicted RBP15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 USP10Q14694 798 aaKnown RBP15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 FBXO47Q5MNV8 452 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 ADGRF2Q8IZF7 708 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 ACTL9Q8TC94 416 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 USP13Q92995 863 aaPredicted RBP15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 USP54Q70EL1 1684 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 ANKRD63C9JTQ0 380 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 E5RI56 91 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 HADHBP55084 474 aaKnown RBP15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 ZACNQ401N2 412 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 TAF2Q6P1X5 1199 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 STKLD1Q8NE28 680 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 RXFP2Q8WXD0 754 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 UBE2OQ9C0C9 1292 aaKnown RBP15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 RXFP1Q9HBX9 757 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 AP4E1Q9UPM8 1137 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 PKD1L3Q7Z443 1732 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 H3BRB1 525 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 PDE2AO00408 941 aaPredicted RBP15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 EPHB6O15197 1021 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 PYGLP06737 847 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 CDK16Q00536 496 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 R3HDM1Q15032 1099 aaKnown RBP15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 SHCBP1Q8NEM2 672 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 ABHD16BQ9H3Z7 469 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 TUT1Q9H6E5 874 aaKnown RBP15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 FIS1Q9Y3D6 152 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 ATXN2Q99700 1313 aaKnown RBP15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 SIGLEC16A6NMB1 481 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 M0R2N6 131 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 POU5F1BQ06416 359 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 RNF219Q5W0B1 726 aaPredicted RBP15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 PBXIP1Q96AQ6 731 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 ALS2Q96Q42 1657 aa15.37■□□□□ 0.05
AP000550.1-201ENST00000420508 HOXA2O43364 376 aa15.36■□□□□ 0.05
AP000550.1-201ENST00000420508 DNAJC3Q13217 504 aa15.36■□□□□ 0.05
AP000550.1-201ENST00000420508 ERMARDQ5T6L9 678 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms