RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 KREMEN2Q8NCW0 462 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 GIPC2Q8TF65 315 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 SLC35F5Q8WV83 523 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 SMARCD1Q96GM5 515 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 FUBP3Q96I24 572 aaKnown RBP eCLIP13.56□□□□□ -0.24
ATG4B-208ENST00000419606 LHX5Q9H2C1 402 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 CSNK1G1Q9HCP0 422 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 FBXW11Q9UKB1 542 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 NENFQ9UMX5 172 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 YIPF1Q9Y548 306 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 HCFC2Q9Y5Z7 792 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 SSU72P8A0A1W2PR75 194 aa13.55□□□□□ -0.24
ATG4B-208ENST00000419606 IGFBP4P22692 258 aa13.55□□□□□ -0.24
ATG4B-208ENST00000419606 CDH5P33151 784 aaPredicted RBP13.55□□□□□ -0.24
ATG4B-208ENST00000419606 MAGEA11P43364 429 aa13.55□□□□□ -0.24
ATG4B-208ENST00000419606 KIF11P52732 1056 aa13.55□□□□□ -0.24
ATG4B-208ENST00000419606 SMARCB1Q12824 385 aa13.55□□□□□ -0.24
ATG4B-208ENST00000419606 PHLDB2Q86SQ0 1253 aa13.55□□□□□ -0.24
ATG4B-208ENST00000419606 PIGZQ86VD9 579 aa13.55□□□□□ -0.24
ATG4B-208ENST00000419606 TMTC1Q8IUR5 882 aa13.55□□□□□ -0.24
ATG4B-208ENST00000419606 TCEAL8Q8IYN2 117 aa13.55□□□□□ -0.24
ATG4B-208ENST00000419606 SLC7A14Q8TBB6 771 aa13.55□□□□□ -0.24
ATG4B-208ENST00000419606 C2orf15Q8WU43 125 aaKnown RBP13.55□□□□□ -0.24
ATG4B-208ENST00000419606 CCDC42Q96M95 316 aa13.55□□□□□ -0.24
ATG4B-208ENST00000419606 CPXM1Q96SM3 734 aa13.55□□□□□ -0.24
ATG4B-208ENST00000419606 NSUN3Q9H649 340 aaKnown RBP13.55□□□□□ -0.24
ATG4B-208ENST00000419606 ABCB6Q9NP58 842 aa13.55□□□□□ -0.24
ATG4B-208ENST00000419606 DMAP1Q9NPF5 467 aaPredicted RBP13.55□□□□□ -0.24
ATG4B-208ENST00000419606 MAN1C1Q9NR34 630 aa13.55□□□□□ -0.24
ATG4B-208ENST00000419606 ATP8B3O60423 1300 aa13.55□□□□□ -0.24
ATG4B-208ENST00000419606 GREB1Q4ZG55 1949 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 REV3LO60673 3130 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 PRRG1O14668 218 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 TNFRSF10BO14763 440 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 XPO1O14980 1071 aaKnown RBP13.54□□□□□ -0.24
ATG4B-208ENST00000419606 AKR1B10O60218 316 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 RFPL2O75678 378 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 GLP2RO95838 553 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 ERBB2P04626 1255 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 C8AP07357 584 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 SETSIPP0DME0 302 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 ELF1P32519 619 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 USP46P62068 366 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 TWF1Q12792 350 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 PTP4A2Q12974 167 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 PDCLQ13371 301 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 KCNC3Q14003 757 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 PTPN20Q4JDL3 420 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 CCDC122Q5T0U0 273 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 ACAD10Q6JQN1 1059 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 VSTM1Q6UX27 236 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 TMEM35BQ8NCS4 154 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 SCAMP5Q8TAC9 235 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 MYLIPQ8WY64 445 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 NDRG1Q92597 394 aaKnown RBP13.54□□□□□ -0.24
ATG4B-208ENST00000419606 C8orf48Q96LL4 319 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 SLC4A5Q9BY07 1137 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 PACSIN1Q9BY11 444 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 DEF6Q9H4E7 631 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 NAGPAQ9UK23 515 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 TFR2Q9UP52 801 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 INSL5Q9Y5Q6 135 aa13.54□□□□□ -0.24
ATG4B-208ENST00000419606 PRRC2BQ5JSZ5 2229 aaKnown RBP13.54□□□□□ -0.24
ATG4B-208ENST00000419606 SZT2Q5T011 3432 aa13.53□□□□□ -0.24
ATG4B-208ENST00000419606 E5RJQ4 531 aa13.53□□□□□ -0.24
ATG4B-208ENST00000419606 LSM8O95777 96 aaKnown RBP13.53□□□□□ -0.24
ATG4B-208ENST00000419606 LCP1P13796 627 aa13.53□□□□□ -0.24
ATG4B-208ENST00000419606 PLA2G4AP47712 749 aa13.53□□□□□ -0.24
ATG4B-208ENST00000419606 TUFMP49411 452 aaKnown RBP13.53□□□□□ -0.24
ATG4B-208ENST00000419606 CENPCQ03188 943 aa13.53□□□□□ -0.24
ATG4B-208ENST00000419606 IFRD2Q12894 506 aaPredicted RBP13.53□□□□□ -0.24
ATG4B-208ENST00000419606 SLC18A3Q16572 532 aa13.53□□□□□ -0.24
ATG4B-208ENST00000419606 CYP4A22Q5TCH4 519 aa13.53□□□□□ -0.24
ATG4B-208ENST00000419606 ALKBH5Q6P6C2 394 aaKnown RBP13.53□□□□□ -0.24
ATG4B-208ENST00000419606 TRIM72Q6ZMU5 477 aa13.53□□□□□ -0.24
ATG4B-208ENST00000419606 MMS22LQ6ZRQ5 1243 aa13.53□□□□□ -0.24
ATG4B-208ENST00000419606 TOGARAM2Q6ZUX3 1019 aa13.53□□□□□ -0.24
ATG4B-208ENST00000419606 MICALL1Q8N3F8 863 aa13.53□□□□□ -0.24
ATG4B-208ENST00000419606 C12orf76Q8N812 135 aaPredicted RBP13.53□□□□□ -0.24
ATG4B-208ENST00000419606 ACRBPQ8NEB7 543 aa13.53□□□□□ -0.24
ATG4B-208ENST00000419606 CLEC4CQ8WTT0 213 aa13.53□□□□□ -0.24
ATG4B-208ENST00000419606 PPP1R13BQ96KQ4 1090 aa13.53□□□□□ -0.24
ATG4B-208ENST00000419606 GUCD1Q96NT3 240 aa13.53□□□□□ -0.24
ATG4B-208ENST00000419606 CDX2Q99626 313 aaPredicted RBP13.53□□□□□ -0.24
ATG4B-208ENST00000419606 C11orf70Q9BRQ4 267 aa13.53□□□□□ -0.24
ATG4B-208ENST00000419606 DESI2Q9BSY9 194 aa13.53□□□□□ -0.24
ATG4B-208ENST00000419606 ST7Q9NRC1 585 aa13.53□□□□□ -0.24
ATG4B-208ENST00000419606 CHORDC1Q9UHD1 332 aaPredicted RBP13.53□□□□□ -0.24
ATG4B-208ENST00000419606 REXO2Q9Y3B8 237 aaKnown RBP13.53□□□□□ -0.24
ATG4B-208ENST00000419606 EPN1Q9Y6I3 576 aaPredicted RBP13.53□□□□□ -0.24
ATG4B-208ENST00000419606 A0A0U1RQJ8 604 aa13.52□□□□□ -0.25
ATG4B-208ENST00000419606 SLC38A8A6NNN8 435 aa13.52□□□□□ -0.25
ATG4B-208ENST00000419606 TRIM66O15016 1216 aa13.52□□□□□ -0.25
ATG4B-208ENST00000419606 CCL16O15467 120 aa13.52□□□□□ -0.25
ATG4B-208ENST00000419606 RTN2O75298 545 aa13.52□□□□□ -0.25
ATG4B-208ENST00000419606 NDUFA10O95299 355 aa13.52□□□□□ -0.25
ATG4B-208ENST00000419606 FTLP02792 175 aaPredicted RBP13.52□□□□□ -0.25
ATG4B-208ENST00000419606 POU3F3P20264 500 aaPredicted RBP13.52□□□□□ -0.25
ATG4B-208ENST00000419606 RPL34P49207 117 aaKnown RBP13.52□□□□□ -0.25
ATG4B-208ENST00000419606 PGFP49763 221 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms