RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 ZAR1Q86SH2 424 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 KCTD6Q8NC69 237 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 Q8NFD4 153 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 OR5AN1Q8NGI8 311 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 OR6Y1Q8NGX8 325 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 CALML6Q8TD86 181 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 C3orf49Q96BT1 292 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 TRIM44Q96DX7 344 aaPredicted RBP5.6□□□□□ -1.51
VPS13A-207ENST00000419472 TTYH1Q9H313 450 aaPredicted RBP5.6□□□□□ -1.51
VPS13A-207ENST00000419472 DBNDD1Q9H9R9 158 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 CCDC177Q9NQR7 707 aaPredicted RBP5.6□□□□□ -1.51
VPS13A-207ENST00000419472 ZNF215Q9UL58 517 aaPredicted RBP5.6□□□□□ -1.51
VPS13A-207ENST00000419472 TBX20Q9UMR3 447 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 KIF1AQ12756 1690 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 LRPPRCP42704 1394 aaKnown RBP5.6□□□□□ -1.51
VPS13A-207ENST00000419472 A0A1W2PQ45 241 aaPredicted RBP5.6□□□□□ -1.51
VPS13A-207ENST00000419472 A0A1W2PQY0 241 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 DNAJB5O75953 348 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 UNC5CO95185 931 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 FTH1P19P0C7X4 201 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 BTF3P20290 206 aaKnown RBP5.6□□□□□ -1.51
VPS13A-207ENST00000419472 AFF3P51826 1226 aaKnown RBP5.6□□□□□ -1.51
VPS13A-207ENST00000419472 NRG3P56975 720 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 PPARDQ03181 441 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 MTM1Q13496 603 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 CCDC178Q5BJE1 867 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 ZNF362Q5T0B9 420 aaPredicted RBP5.6□□□□□ -1.51
VPS13A-207ENST00000419472 SZRD1Q7Z422 152 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 NUP43Q8NFH3 380 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 AFAP1L1Q8TED9 768 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 ZNF384Q8TF68 577 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 SEC14L1Q92503 715 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 BCAS3Q9H6U6 928 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 TNFRSF10DQ9UBN6 386 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 TRPS1Q9UHF7 1281 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 RRP7AQ9Y3A4 280 aaKnown RBP5.6□□□□□ -1.51
VPS13A-207ENST00000419472 CCDC196A0A1B0GTZ2 297 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 AGAP14A8MT82 685 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 H7C4K7 107 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 NRP2O60462 931 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 PPP6R2O75170 966 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 TMEM63AO94886 807 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 CYP21A2P08686 494 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 CPA1P15085 419 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 PRKCAP17252 672 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 MST1P26927 711 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 CORO7P57737 925 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 PSMC6P62333 389 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 ZNF200P98182 395 aaPredicted RBP5.59□□□□□ -1.51
VPS13A-207ENST00000419472 GRM4Q14833 912 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 GPR68Q15743 365 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 KCTD20Q7Z5Y7 419 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 ARMC8Q8IUR7 673 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 TTC39CQ8N584 583 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 PIK3C3Q8NEB9 887 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 APPL2Q8NEU8 664 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 SNX33Q8WV41 574 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 CCDC34Q96HJ3 373 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 DYDC2Q96IM9 177 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 MEGF10Q96KG7 1140 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 CNDP2Q96KP4 475 aaKnown RBP5.59□□□□□ -1.51
VPS13A-207ENST00000419472 MYOCQ99972 504 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 FTOQ9C0B1 505 aaKnown RBP eCLIP5.59□□□□□ -1.51
VPS13A-207ENST00000419472 HAPLN2Q9GZV7 340 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 OR10A5Q9H207 317 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 VPS16Q9H269 839 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 SPON1Q9HCB6 807 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 A1CFQ9NQ94 594 aaKnown RBP5.59□□□□□ -1.51
VPS13A-207ENST00000419472 ABCF3Q9NUQ8 709 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 ZDHHC7Q9NXF8 308 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 COL16A1Q07092 1604 aaPredicted RBP5.59□□□□□ -1.51
VPS13A-207ENST00000419472 ABCC11Q96J66 1382 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 ASXL1Q8IXJ9 1541 aa5.59□□□□□ -1.51
VPS13A-207ENST00000419472 C17orf113A0A1B0GUU1 675 aa5.59□□□□□ -1.52
VPS13A-207ENST00000419472 HMX2A2RU54 273 aa5.59□□□□□ -1.52
VPS13A-207ENST00000419472 KCNQ3O43525 872 aa5.59□□□□□ -1.52
VPS13A-207ENST00000419472 BEST1O76090 585 aa5.59□□□□□ -1.52
VPS13A-207ENST00000419472 FAM200BP0CF97 657 aa5.59□□□□□ -1.52
VPS13A-207ENST00000419472 APEX1P27695 318 aaKnown RBP5.59□□□□□ -1.52
VPS13A-207ENST00000419472 GALK1P51570 392 aa5.59□□□□□ -1.52
VPS13A-207ENST00000419472 SLC44A4Q53GD3 710 aa5.59□□□□□ -1.52
VPS13A-207ENST00000419472 BICRALQ6AI39 1079 aa5.59□□□□□ -1.52
VPS13A-207ENST00000419472 MFSD5Q6N075 450 aa5.59□□□□□ -1.52
VPS13A-207ENST00000419472 LYPD4Q6UWN0 246 aa5.59□□□□□ -1.52
VPS13A-207ENST00000419472 LILRA3Q8N6C8 439 aaPredicted RBP5.59□□□□□ -1.52
VPS13A-207ENST00000419472 LINC01599Q8WXQ3 324 aa5.59□□□□□ -1.52
VPS13A-207ENST00000419472 TOE1Q96GM8 510 aaKnown RBP5.59□□□□□ -1.52
VPS13A-207ENST00000419472 SLC25A18Q9H1K4 315 aa5.59□□□□□ -1.52
VPS13A-207ENST00000419472 C19orf44Q9H6X5 657 aa5.59□□□□□ -1.52
VPS13A-207ENST00000419472 RMI1Q9H9A7 625 aa5.59□□□□□ -1.52
VPS13A-207ENST00000419472 GALNT8Q9NY28 637 aa5.59□□□□□ -1.52
VPS13A-207ENST00000419472 EIF2B4Q9UI10 523 aaKnown RBP5.59□□□□□ -1.52
VPS13A-207ENST00000419472 HCFC2Q9Y5Z7 792 aa5.59□□□□□ -1.52
VPS13A-207ENST00000419472 FMN2Q9NZ56 1722 aa5.59□□□□□ -1.52
VPS13A-207ENST00000419472 METP08581 1390 aa5.59□□□□□ -1.52
VPS13A-207ENST00000419472 E7EVH7 732 aa5.58□□□□□ -1.52
VPS13A-207ENST00000419472 LRG1P02750 347 aa5.58□□□□□ -1.52
VPS13A-207ENST00000419472 TGM1P22735 817 aa5.58□□□□□ -1.52
VPS13A-207ENST00000419472 KLRC1P26715 233 aa5.58□□□□□ -1.52
VPS13A-207ENST00000419472 GUCY1A2P33402 732 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms