RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 PPP1R2P1Q96PQ5 205 aa8.8□□□□□ -1
USP54-203ENST00000418501 PRKAG2Q9UGJ0 569 aa8.8□□□□□ -1
USP54-203ENST00000418501 AMACRQ9UHK6 382 aa8.8□□□□□ -1
USP54-203ENST00000418501 NFU1Q9UMS0 254 aa8.8□□□□□ -1
USP54-203ENST00000418501 L1RE1Q9UN81 338 aa8.8□□□□□ -1
USP54-203ENST00000418501 A0A1W2PQ45 241 aaPredicted RBP8.79□□□□□ -1
USP54-203ENST00000418501 A0A1W2PQY0 241 aa8.79□□□□□ -1
USP54-203ENST00000418501 SYN3O14994 580 aa8.79□□□□□ -1
USP54-203ENST00000418501 AP1G2O75843 785 aa8.79□□□□□ -1
USP54-203ENST00000418501 TGM2P21980 687 aa8.79□□□□□ -1
USP54-203ENST00000418501 CYP2C18P33260 490 aa8.79□□□□□ -1
USP54-203ENST00000418501 PTPN9P43378 593 aa8.79□□□□□ -1
USP54-203ENST00000418501 LMAN1P49257 510 aa8.79□□□□□ -1
USP54-203ENST00000418501 VEGFBP49765 207 aa8.79□□□□□ -1
USP54-203ENST00000418501 SCNN1GP51170 649 aa8.79□□□□□ -1
USP54-203ENST00000418501 GUCY2FP51841 1108 aa8.79□□□□□ -1
USP54-203ENST00000418501 TRMT10CQ7L0Y3 403 aaKnown RBP8.79□□□□□ -1
USP54-203ENST00000418501 PPP1R10Q96QC0 940 aaKnown RBP8.79□□□□□ -1
USP54-203ENST00000418501 MRPL45Q9BRJ2 306 aaKnown RBP8.79□□□□□ -1
USP54-203ENST00000418501 SLC4A5Q9BY07 1137 aa8.79□□□□□ -1
USP54-203ENST00000418501 TRIM31Q9BZY9 425 aa8.79□□□□□ -1
USP54-203ENST00000418501 RNF208Q9H0X6 261 aa8.79□□□□□ -1
USP54-203ENST00000418501 DMAP1Q9NPF5 467 aaPredicted RBP8.79□□□□□ -1
USP54-203ENST00000418501 ACP6Q9NPH0 428 aa8.79□□□□□ -1
USP54-203ENST00000418501 RGS18Q9NS28 235 aa8.79□□□□□ -1
USP54-203ENST00000418501 TMEM59LQ9UK28 342 aa8.79□□□□□ -1
USP54-203ENST00000418501 USP18Q9UMW8 372 aa8.79□□□□□ -1
USP54-203ENST00000418501 PCDHB8Q9UN66 801 aa8.79□□□□□ -1
USP54-203ENST00000418501 ARL5CA6NH57 179 aa8.79□□□□□ -1
USP54-203ENST00000418501 OR6C75A6NL08 312 aa8.79□□□□□ -1
USP54-203ENST00000418501 SGK1O00141 431 aa8.79□□□□□ -1
USP54-203ENST00000418501 PITPNM1O00562 1244 aa8.79□□□□□ -1
USP54-203ENST00000418501 ALDH2P05091 517 aa8.79□□□□□ -1
USP54-203ENST00000418501 SLC2A3P11169 496 aa8.79□□□□□ -1
USP54-203ENST00000418501 LCP1P13796 627 aa8.79□□□□□ -1
USP54-203ENST00000418501 GPD2P43304 727 aa8.79□□□□□ -1
USP54-203ENST00000418501 CDH6P55285 790 aa8.79□□□□□ -1
USP54-203ENST00000418501 SLC7A5Q01650 507 aa8.79□□□□□ -1
USP54-203ENST00000418501 BYSLQ13895 437 aaKnown RBP8.79□□□□□ -1
USP54-203ENST00000418501 NAA30Q147X3 362 aaPredicted RBP8.79□□□□□ -1
USP54-203ENST00000418501 CYP1B1Q16678 543 aa8.79□□□□□ -1
USP54-203ENST00000418501 PTPN20Q4JDL3 420 aa8.79□□□□□ -1
USP54-203ENST00000418501 TAOK1Q7L7X3 1001 aa8.79□□□□□ -1
USP54-203ENST00000418501 SLC26A9Q7LBE3 791 aa8.79□□□□□ -1
USP54-203ENST00000418501 ADAT2Q7Z6V5 191 aaKnown RBP8.79□□□□□ -1
USP54-203ENST00000418501 SMG8Q8ND04 991 aaKnown RBP8.79□□□□□ -1
USP54-203ENST00000418501 RXFP2Q8WXD0 754 aa8.79□□□□□ -1
USP54-203ENST00000418501 KCTD13Q8WZ19 329 aa8.79□□□□□ -1
USP54-203ENST00000418501 TFAP2BQ92481 460 aa8.79□□□□□ -1
USP54-203ENST00000418501 CDK5RAP1Q96SZ6 601 aaKnown RBP8.79□□□□□ -1
USP54-203ENST00000418501 PNKPQ96T60 521 aa8.79□□□□□ -1
USP54-203ENST00000418501 GOLPH3Q9H4A6 298 aa8.79□□□□□ -1
USP54-203ENST00000418501 CDHR5Q9HBB8 845 aa8.79□□□□□ -1
USP54-203ENST00000418501 CNGB3Q9NQW8 809 aa8.79□□□□□ -1
USP54-203ENST00000418501 LCTP09848 1927 aa8.79□□□□□ -1
USP54-203ENST00000418501 H7C0C1 242 aa8.79□□□□□ -1
USP54-203ENST00000418501 MTSS1O43312 755 aa8.79□□□□□ -1
USP54-203ENST00000418501 DAB1O75553 588 aa8.79□□□□□ -1
USP54-203ENST00000418501 PYGMP11217 842 aa8.79□□□□□ -1
USP54-203ENST00000418501 RALAP11233 206 aa8.79□□□□□ -1
USP54-203ENST00000418501 ATP5OP48047 213 aa8.79□□□□□ -1
USP54-203ENST00000418501 SULT1E1P49888 294 aa8.79□□□□□ -1
USP54-203ENST00000418501 PEX5P50542 639 aa8.79□□□□□ -1
USP54-203ENST00000418501 YWHAHQ04917 246 aaPredicted RBP8.79□□□□□ -1
USP54-203ENST00000418501 CCDC14Q49A88 953 aa8.79□□□□□ -1
USP54-203ENST00000418501 SPOUT1Q5T280 376 aaKnown RBP8.79□□□□□ -1
USP54-203ENST00000418501 DRICH1Q6PGQ1 229 aaPredicted RBP8.79□□□□□ -1
USP54-203ENST00000418501 STRADAQ7RTN6 431 aa8.79□□□□□ -1
USP54-203ENST00000418501 TMEM110Q86TL2 294 aa8.79□□□□□ -1
USP54-203ENST00000418501 MREGQ8N565 214 aa8.79□□□□□ -1
USP54-203ENST00000418501 HSPH1Q92598 858 aa8.79□□□□□ -1
USP54-203ENST00000418501 BRD8Q9H0E9 1235 aa8.79□□□□□ -1
USP54-203ENST00000418501 AAASQ9NRG9 546 aa8.79□□□□□ -1
USP54-203ENST00000418501 RCOR3Q9P2K3 495 aaPredicted RBP8.79□□□□□ -1
USP54-203ENST00000418501 MYADML2A6NDP7 307 aa8.78□□□□□ -1
USP54-203ENST00000418501 ZNF487B1APH4 448 aa8.78□□□□□ -1
USP54-203ENST00000418501 NOS2P35228 1153 aa8.78□□□□□ -1
USP54-203ENST00000418501 SERPINB6P35237 376 aa8.78□□□□□ -1
USP54-203ENST00000418501 PLA2G4AP47712 749 aa8.78□□□□□ -1
USP54-203ENST00000418501 RGS7P49802 495 aa8.78□□□□□ -1
USP54-203ENST00000418501 WNT7BP56706 349 aa8.78□□□□□ -1
USP54-203ENST00000418501 BCAR1P56945 870 aa8.78□□□□□ -1
USP54-203ENST00000418501 RPL10AP62906 217 aaKnown RBP8.78□□□□□ -1
USP54-203ENST00000418501 LPIN1Q14693 890 aa8.78□□□□□ -1
USP54-203ENST00000418501 SOWAHAQ2M3V2 549 aa8.78□□□□□ -1
USP54-203ENST00000418501 DARS2Q6PI48 645 aaKnown RBP8.78□□□□□ -1
USP54-203ENST00000418501 ZNF296Q8WUU4 475 aaPredicted RBP8.78□□□□□ -1
USP54-203ENST00000418501 SLCO2A1Q92959 643 aa8.78□□□□□ -1
USP54-203ENST00000418501 CFAP57Q96MR6 1250 aa8.78□□□□□ -1
USP54-203ENST00000418501 TMEM175Q9BSA9 504 aa8.78□□□□□ -1
USP54-203ENST00000418501 TRPV6Q9H1D0 765 aa8.78□□□□□ -1
USP54-203ENST00000418501 FBXO44Q9H4M3 255 aa8.78□□□□□ -1
USP54-203ENST00000418501 HMGB1P1B2RPK0 211 aaPredicted RBP8.78□□□□□ -1
USP54-203ENST00000418501 AP3B1O00203 1094 aa8.78□□□□□ -1
USP54-203ENST00000418501 TRIM66O15016 1216 aa8.78□□□□□ -1
USP54-203ENST00000418501 TTI1O43156 1089 aa8.78□□□□□ -1
USP54-203ENST00000418501 KRT14P02533 472 aa8.78□□□□□ -1
USP54-203ENST00000418501 OR1G1P47890 313 aa8.78□□□□□ -1
USP54-203ENST00000418501 NR2C2P49116 596 aa8.78□□□□□ -1
USP54-203ENST00000418501 PLTPP55058 493 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms