RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 RUBCNQ92622 972 aa11.22□□□□□ -0.61
SMPD4P1-201ENST00000416717 HAUS1Q96CS2 278 aa11.22□□□□□ -0.61
SMPD4P1-201ENST00000416717 SLITRK1Q96PX8 696 aa11.22□□□□□ -0.61
SMPD4P1-201ENST00000416717 SLC4A5Q9BY07 1137 aa11.22□□□□□ -0.61
SMPD4P1-201ENST00000416717 RNF208Q9H0X6 261 aa11.22□□□□□ -0.61
SMPD4P1-201ENST00000416717 SAGE1Q9NXZ1 904 aa11.22□□□□□ -0.61
SMPD4P1-201ENST00000416717 SNX24Q9Y343 169 aa11.22□□□□□ -0.61
SMPD4P1-201ENST00000416717 RNF8O76064 485 aa11.21□□□□□ -0.61
SMPD4P1-201ENST00000416717 BEST1O76090 585 aa11.21□□□□□ -0.61
SMPD4P1-201ENST00000416717 ITGB1P05556 798 aa11.21□□□□□ -0.61
SMPD4P1-201ENST00000416717 TNFRSF8P28908 595 aa11.21□□□□□ -0.61
SMPD4P1-201ENST00000416717 MIPP30301 263 aa11.21□□□□□ -0.61
SMPD4P1-201ENST00000416717 PTGIRP43119 386 aa11.21□□□□□ -0.61
SMPD4P1-201ENST00000416717 DYNLT1P63172 113 aa11.21□□□□□ -0.61
SMPD4P1-201ENST00000416717 SMYD5Q6GMV2 418 aa11.21□□□□□ -0.61
SMPD4P1-201ENST00000416717 OLFML1Q6UWY5 402 aa11.21□□□□□ -0.61
SMPD4P1-201ENST00000416717 LRRC8DQ7L1W4 858 aa11.21□□□□□ -0.61
SMPD4P1-201ENST00000416717 NIPA2Q8N8Q9 360 aa11.21□□□□□ -0.61
SMPD4P1-201ENST00000416717 TSEN2Q8NCE0 465 aaKnown RBP11.21□□□□□ -0.61
SMPD4P1-201ENST00000416717 HSPH1Q92598 858 aa11.21□□□□□ -0.61
SMPD4P1-201ENST00000416717 CCDC114Q96M63 670 aa11.21□□□□□ -0.61
SMPD4P1-201ENST00000416717 CRTAC1Q9NQ79 661 aa11.21□□□□□ -0.61
SMPD4P1-201ENST00000416717 FAM53CQ9NYF3 392 aa11.21□□□□□ -0.61
SMPD4P1-201ENST00000416717 MYBPHLA2RUH7 354 aa11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 C2CD4BA6NLJ0 364 aa11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 C9IYK1 514 aa11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 B4GALT3O60512 393 aa11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 GSCP56915 257 aaPredicted RBP11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 SLC6A3Q01959 620 aa11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 SLC25A11Q02978 314 aaKnown RBP11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 TRIP13Q15645 432 aaPredicted RBP11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 PPP2R5EQ16537 467 aa11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 HADHQ16836 314 aaKnown RBP11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 SCYL2Q6P3W7 929 aa11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 SPOCD1Q6ZMY3 1216 aa11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 TMEM110Q86TL2 294 aa11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 ZNF598Q86UK7 904 aaKnown RBP11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 ZNF280BQ86YH2 543 aa11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 RCOR2Q8IZ40 523 aa11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 RBM41Q96IZ5 413 aaKnown RBP11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 SYT15Q9BQS2 421 aa11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 TRAIPQ9BWF2 469 aa11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 RAB17Q9H0T7 212 aa11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 NGRNQ9NPE2 291 aaKnown RBP11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 RGS18Q9NS28 235 aa11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 HPCAL4Q9UM19 191 aa11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 ZNF638Q14966 1978 aaKnown RBP11.21□□□□□ -0.62
SMPD4P1-201ENST00000416717 GABRDO14764 452 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 POLR3GO15318 223 aaPredicted RBP11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 CD48P09326 243 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 SETSIPP0DME0 302 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 SKIP12755 728 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 TFE3P19532 575 aaPredicted RBP11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 ECHS1P30084 290 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 RPL9P32969 192 aaKnown RBP11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 ZNF143P52747 638 aaPredicted RBP11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 MAP3K7CLP57077 242 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 GRIK3Q13003 919 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 KLF1Q13351 362 aaPredicted RBP11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 DHX34Q14147 1143 aaKnown RBP11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 PPP1R7Q15435 360 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 CYP1B1Q16678 543 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 CLLU1OSQ5K130 101 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 EMBQ6PCB8 327 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 PAQR9Q6ZVX9 377 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 SLC24A5Q71RS6 500 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 PIGZQ86VD9 579 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 FNIP1Q8TF40 1166 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 PEBP4Q96S96 227 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 ERP44Q9BS26 406 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 RHOBTB2Q9BYZ6 727 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 DCLK3Q9C098 648 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 ASNSD1Q9NWL6 643 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 USP18Q9UMW8 372 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 TSC2P49815 1807 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 H3BQF6 201 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 DNM1LO00429 736 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 NBNO60934 754 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 CAND2O75155 1236 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 CCL5P13501 91 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 SELPP16109 830 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 OAS2P29728 719 aaKnown RBP11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 CETN2P41208 172 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 VPS41P49754 854 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 ADIGQ0VDE8 80 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 TUSC3Q13454 348 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 CUL1Q13616 776 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 CCDC14Q49A88 953 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 LRRC38Q5VT99 294 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 GLB1LQ6UWU2 654 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 PRUNE1Q86TP1 453 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 FAM126BQ8IXS8 530 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 DBF4BQ8NFT6 615 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 RIN2Q8WYP3 895 aaPredicted RBP11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 KHSRPQ92945 711 aaKnown RBP eCLIP11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 SCLYQ96I15 445 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 CNPY3Q9BT09 278 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 DNAI2Q9GZS0 605 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 LRRC19Q9H756 370 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 KRT82Q9NSB4 513 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms