RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 ZNF197O14709 1029 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 XPO1O14980 1071 aaKnown RBP12.61□□□□□ -0.39
ATG4B-207ENST00000415107 CCL16O15467 120 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 RTN3O95197 1032 aaPredicted RBP12.61□□□□□ -0.39
ATG4B-207ENST00000415107 SLC34A2O95436 690 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 RHOP08100 348 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 KRT5P13647 590 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 PFKLP17858 780 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 CDH5P33151 784 aaPredicted RBP12.61□□□□□ -0.39
ATG4B-207ENST00000415107 STAT1P42224 750 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 PPP3CCP48454 512 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 CACNA2D1P54289 1103 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 SLC8A3P57103 927 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 MRPS5P82675 430 aaKnown RBP12.61□□□□□ -0.39
ATG4B-207ENST00000415107 RAPGEF1Q13905 1077 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 TRIM14Q14142 442 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 ARID5BQ14865 1188 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 PABPC1LQ4VXU2 614 aaKnown RBP12.61□□□□□ -0.39
ATG4B-207ENST00000415107 RAB41Q5JT25 222 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 PTCRAQ6ISU1 281 aaPredicted RBP12.61□□□□□ -0.39
ATG4B-207ENST00000415107 NUP93Q8N1F7 819 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 SCML4Q8N228 414 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 EPS8L1Q8TE68 723 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 STK32AQ8WU08 396 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 ZNF606Q8WXB4 792 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 KCTD13Q8WZ19 329 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 MRFAP1L1Q96HT8 127 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 PCMTD1Q96MG8 357 aaPredicted RBP12.61□□□□□ -0.39
ATG4B-207ENST00000415107 SPAG5Q96R06 1193 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 LPIN3Q9BQK8 851 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 MED10Q9BTT4 135 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 LHX5Q9H2C1 402 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 IL21Q9HBE4 155 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 PRDM6Q9NQX0 595 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 HESX1Q9UBX0 185 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 USP3Q9Y6I4 520 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 SLC38A8A6NNN8 435 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 CYP26A1O43174 497 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 SOAT2O75908 522 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 BEST1O76090 585 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 CCDC172P0C7W6 258 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 CD19P15391 556 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 CYP11B1P15538 503 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 BRD2P25440 801 aaKnown RBP12.6□□□□□ -0.39
ATG4B-207ENST00000415107 DDX6P26196 483 aaKnown RBP eCLIP12.6□□□□□ -0.39
ATG4B-207ENST00000415107 ADORA2BP29275 332 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 WEE1P30291 646 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 CDC25CP30307 473 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 PRKCIP41743 596 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 PDE6CP51160 858 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 TFF2Q03403 129 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 DDR2Q16832 855 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 SNX30Q5VWJ9 437 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 SPECC1LQ69YQ0 1117 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 EP400NLQ6ZTU2 488 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 CACNA2D4Q7Z3S7 1137 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 GRASPQ7Z6J2 395 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-207ENST00000415107 VSTM4Q8IW00 320 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 SCN4BQ8IWT1 228 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 SLC35F5Q8WV83 523 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 DDX1Q92499 740 aaKnown RBP12.6□□□□□ -0.39
ATG4B-207ENST00000415107 SYN2Q92777 582 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-207ENST00000415107 HSFY1Q96LI6 401 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 ASB2Q96Q27 587 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 PHF7Q9BWX1 381 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-207ENST00000415107 FBXO44Q9H4M3 255 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 POMKQ9H5K3 350 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 PIDD1Q9HB75 910 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 NLRC4Q9NPP4 1024 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.6□□□□□ -0.398e-14■□□□□ 9.8
ATG4B-207ENST00000415107 AIPL1Q9NZN9 384 aa12.6□□□□□ -0.39
ATG4B-207ENST00000415107 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.6□□□□□ -0.39
ATG4B-207ENST00000415107 OBSL1O75147 1896 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 MOSPD3O75425 235 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 F11P03951 625 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 GYPCP04921 128 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 ZDHHC11BP0C7U3 371 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 FERP16591 822 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 GPD2P43304 727 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 GPR15P49685 360 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 KIF11P52732 1056 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 SLC5A3P53794 718 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 GOLGA7BQ2TAP0 167 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 CYP4A22Q5TCH4 519 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 PDZD4Q76G19 769 aaPredicted RBP12.59□□□□□ -0.39
ATG4B-207ENST00000415107 CCDC186Q7Z3E2 898 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 PIGZQ86VD9 579 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 SLC47A2Q86VL8 602 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 ZNF276Q8N554 614 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 PDZD8Q8NEN9 1154 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 FEZF2Q8TBJ5 459 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 KCNK16Q96T55 309 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 HCFC1R1Q9NWW0 138 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 GDE1Q9NZC3 331 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 EPS15L1Q9UBC2 864 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 NOCTQ9UK39 431 aaKnown RBP12.59□□□□□ -0.39
ATG4B-207ENST00000415107 CAPN11Q9UMQ6 739 aa12.59□□□□□ -0.39
ATG4B-207ENST00000415107 DENND4CQ5VZ89 1909 aa12.58□□□□□ -0.39
ATG4B-207ENST00000415107 DOCK8Q8NF50 2099 aa12.58□□□□□ -0.39
ATG4B-207ENST00000415107 ZNF638Q14966 1978 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms