RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 CYP2A13Q16696 494 aa5.38□□□□□ -1.55
PTPRK-209ENST00000415046 CRY2Q49AN0 593 aa5.38□□□□□ -1.55
PTPRK-209ENST00000415046 CCDC152Q4G0S7 254 aa5.38□□□□□ -1.55
PTPRK-209ENST00000415046 EPHA10Q5JZY3 1008 aa5.38□□□□□ -1.55
PTPRK-209ENST00000415046 SDE2Q6IQ49 451 aa5.38□□□□□ -1.55
PTPRK-209ENST00000415046 SPATS2Q86XZ4 545 aaKnown RBP5.38□□□□□ -1.55
PTPRK-209ENST00000415046 FTSJ3Q8IY81 847 aaKnown RBP5.38□□□□□ -1.55
PTPRK-209ENST00000415046 OR2I1PQ8NGU4 316 aa5.38□□□□□ -1.55
PTPRK-209ENST00000415046 LRFN3Q9BTN0 628 aa5.38□□□□□ -1.55
PTPRK-209ENST00000415046 DUSP26Q9BV47 211 aa5.38□□□□□ -1.55
PTPRK-209ENST00000415046 PCDHGA2Q9Y5H1 932 aa5.38□□□□□ -1.55
PTPRK-209ENST00000415046 SCN4AP35499 1836 aa5.38□□□□□ -1.55
PTPRK-209ENST00000415046 COL4A5P29400 1685 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 ADAMTSL1Q8N6G6 1762 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 K7ESF4 209 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 AMY1AP04745 511 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 NBPF7P0C2Y1 421 aaPredicted RBP5.37□□□□□ -1.55
PTPRK-209ENST00000415046 CKBP12277 381 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 TRIM27P14373 513 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 ALDH1B1P30837 517 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 CCT4P50991 539 aaKnown RBP5.37□□□□□ -1.55
PTPRK-209ENST00000415046 VAV2P52735 878 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 ERVK-21P61565 698 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 ATP8B2P98198 1209 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 GRAPQ13588 217 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 CCDC93Q567U6 631 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 ZNF362Q5T0B9 420 aaPredicted RBP5.37□□□□□ -1.55
PTPRK-209ENST00000415046 FOXR2Q6PJQ5 311 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 ATF7IPQ6VMQ6 1270 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 KRT26Q7Z3Y9 468 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 ITPRIPQ8IWB1 547 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 GRAPLQ8TC17 118 aaPredicted RBP5.37□□□□□ -1.55
PTPRK-209ENST00000415046 CELF1Q92879 486 aaKnown RBP5.37□□□□□ -1.55
PTPRK-209ENST00000415046 SUCLG2Q96I99 432 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 TMX4Q9H1E5 349 aaPredicted RBP5.37□□□□□ -1.55
PTPRK-209ENST00000415046 MANSC1Q9H8J5 431 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 UNKLQ9H9P5 680 aaKnown RBP5.37□□□□□ -1.55
PTPRK-209ENST00000415046 RSAD1Q9HA92 442 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 CASS4Q9NQ75 786 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 ZNF277Q9NRM2 450 aaPredicted RBP5.37□□□□□ -1.55
PTPRK-209ENST00000415046 FOXJ2Q9P0K8 574 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 GPR45Q9Y5Y3 372 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 TRPM7Q96QT4 1865 aa5.37□□□□□ -1.55
PTPRK-209ENST00000415046 MYH2Q9UKX2 1941 aa5.36□□□□□ -1.55
PTPRK-209ENST00000415046 MYADML2A6NDP7 307 aa5.36□□□□□ -1.55
PTPRK-209ENST00000415046 MGST3O14880 152 aa5.36□□□□□ -1.55
PTPRK-209ENST00000415046 UBTFL1P0CB47 393 aaPredicted RBP5.36□□□□□ -1.55
PTPRK-209ENST00000415046 YY1P25490 414 aa5.36□□□□□ -1.55
PTPRK-209ENST00000415046 LMO1P25800 156 aa5.36□□□□□ -1.55
PTPRK-209ENST00000415046 RARRES1P49788 294 aa5.36□□□□□ -1.55
PTPRK-209ENST00000415046 SF3B3Q15393 1217 aaKnown RBP5.36□□□□□ -1.55
PTPRK-209ENST00000415046 DACT2Q5SW24 774 aa5.36□□□□□ -1.55
PTPRK-209ENST00000415046 LRCH2Q5VUJ6 765 aa5.36□□□□□ -1.55
PTPRK-209ENST00000415046 ZGPATQ8N5A5 531 aaKnown RBP5.36□□□□□ -1.55
PTPRK-209ENST00000415046 TMEM57Q8N5G2 664 aa5.36□□□□□ -1.55
PTPRK-209ENST00000415046 WDR66Q8TBY9 1149 aa5.36□□□□□ -1.55
PTPRK-209ENST00000415046 CCHCR1Q8TD31 782 aa5.36□□□□□ -1.55
PTPRK-209ENST00000415046 NUP133Q8WUM0 1156 aa5.36□□□□□ -1.55
PTPRK-209ENST00000415046 PDLIM2Q96JY6 352 aa5.36□□□□□ -1.55
PTPRK-209ENST00000415046 MEIS3Q99687 375 aa5.36□□□□□ -1.55
PTPRK-209ENST00000415046 AIFM2Q9BRQ8 373 aa5.36□□□□□ -1.55
PTPRK-209ENST00000415046 USP44Q9H0E7 712 aa5.36□□□□□ -1.55
PTPRK-209ENST00000415046 TAOK3Q9H2K8 898 aa5.36□□□□□ -1.55
PTPRK-209ENST00000415046 BICC1Q9H694 974 aaKnown RBP5.36□□□□□ -1.55
PTPRK-209ENST00000415046 KCTD5Q9NXV2 234 aa5.36□□□□□ -1.55
PTPRK-209ENST00000415046 HSFX1Q9UBD0 423 aa5.36□□□□□ -1.55
PTPRK-209ENST00000415046 RUVBL1Q9Y265 456 aaKnown RBP5.36□□□□□ -1.55
PTPRK-209ENST00000415046 MTO1Q9Y2Z2 717 aaKnown RBP5.36□□□□□ -1.55
PTPRK-209ENST00000415046 CDK5RAP2Q96SN8 1893 aa5.36□□□□□ -1.55
PTPRK-209ENST00000415046 UTRNP46939 3433 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 AKAP11Q9UKA4 1901 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 WDR90Q96KV7 1748 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 SNED1Q8TER0 1413 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 RTL9Q8NET4 1388 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 ANKRD18BA2A2Z9 1011 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 ERN1O75460 977 aaKnown RBP5.35□□□□□ -1.55
PTPRK-209ENST00000415046 ZFPL1O95159 310 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 C1RP00736 705 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 AGXTP21549 392 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 IGHMBP2P38935 993 aaKnown RBP5.35□□□□□ -1.55
PTPRK-209ENST00000415046 PRELPP51888 382 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 RPS8P62241 208 aaKnown RBP5.35□□□□□ -1.55
PTPRK-209ENST00000415046 NOMO3P69849 1222 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 GPSM2P81274 684 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 MRPS35P82673 323 aaKnown RBP5.35□□□□□ -1.55
PTPRK-209ENST00000415046 IFIT5Q13325 482 aaKnown RBP5.35□□□□□ -1.55
PTPRK-209ENST00000415046 CCDC57Q2TAC2 916 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 NOMO2Q5JPE7 1267 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 RNF219Q5W0B1 726 aaPredicted RBP5.35□□□□□ -1.55
PTPRK-209ENST00000415046 ANKRD18AQ8IVF6 992 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 LNX2Q8N448 690 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 FITM2Q8N6M3 262 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 ANKRD44Q8N8A2 993 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 KLHDC4Q8TBB5 520 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 ACTRT2Q8TDY3 377 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 COG1Q8WTW3 980 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 ARHGAP45Q92619 1136 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 MARS2Q96GW9 593 aaKnown RBP5.35□□□□□ -1.55
PTPRK-209ENST00000415046 KAZALD1Q96I82 304 aa5.35□□□□□ -1.55
PTPRK-209ENST00000415046 MED15Q96RN5 788 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms