RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 TTLL2Q9BWV7 592 aa27.98■■■□□ 2.07
VEGFA-207ENST00000413642 SPATA6Q9NWH7 488 aaPredicted RBP27.98■■■□□ 2.07
VEGFA-207ENST00000413642 GCNT4Q9P109 453 aa27.98■■■□□ 2.07
VEGFA-207ENST00000413642 MRPS17Q9Y2R5 130 aaKnown RBP27.98■■■□□ 2.07
VEGFA-207ENST00000413642 BIN1O00499 593 aa27.97■■■□□ 2.07
VEGFA-207ENST00000413642 KRT39Q6A163 491 aa27.97■■■□□ 2.07
VEGFA-207ENST00000413642 TRIM68Q6AZZ1 485 aa27.97■■■□□ 2.07
VEGFA-207ENST00000413642 TXNDC11Q6PKC3 985 aa27.97■■■□□ 2.07
VEGFA-207ENST00000413642 MAML2Q8IZL2 1156 aaPredicted RBP27.97■■■□□ 2.07
VEGFA-207ENST00000413642 FUKQ8N0W3 1084 aa27.97■■■□□ 2.07
VEGFA-207ENST00000413642 C12orf29Q8N999 325 aa27.97■■■□□ 2.07
VEGFA-207ENST00000413642 FAM49BQ9NUQ9 324 aa27.97■■■□□ 2.07
VEGFA-207ENST00000413642 THG1LQ9NWX6 298 aaKnown RBP27.97■■■□□ 2.07
VEGFA-207ENST00000413642 CHMP5Q9NZZ3 219 aa27.97■■■□□ 2.07
VEGFA-207ENST00000413642 TRAV19A0A0A6YYK7 116 aa27.96■■■□□ 2.07
VEGFA-207ENST00000413642 SOBPA7XYQ1 873 aa27.96■■■□□ 2.07
VEGFA-207ENST00000413642 CD58P19256 250 aa27.96■■■□□ 2.07
VEGFA-207ENST00000413642 GTF2H1P32780 548 aa27.96■■■□□ 2.07
VEGFA-207ENST00000413642 FKBP3Q00688 224 aaKnown RBP27.96■■■□□ 2.07
VEGFA-207ENST00000413642 CRYBG2Q8N1P7 616 aa27.96■■■□□ 2.07
VEGFA-207ENST00000413642 CEP295NLQ96MC4 621 aa27.96■■■□□ 2.07
VEGFA-207ENST00000413642 FAM83CQ9BQN1 747 aa27.96■■■□□ 2.07
VEGFA-207ENST00000413642 IMPG2Q9BZV3 1241 aa27.96■■■□□ 2.07
VEGFA-207ENST00000413642 SPECC1L-ADORA2AF8WAN1 911 aa27.95■■■□□ 2.06
VEGFA-207ENST00000413642 CKMP06732 381 aa27.95■■■□□ 2.06
VEGFA-207ENST00000413642 NBL1P41271 181 aa27.95■■■□□ 2.06
VEGFA-207ENST00000413642 MXI1P50539 228 aa27.95■■■□□ 2.06
VEGFA-207ENST00000413642 TAF10Q12962 218 aa27.95■■■□□ 2.06
VEGFA-207ENST00000413642 DCAF17Q5H9S7 520 aaPredicted RBP27.95■■■□□ 2.06
VEGFA-207ENST00000413642 WDR44Q5JSH3 913 aa27.95■■■□□ 2.06
VEGFA-207ENST00000413642 KLHL10Q6JEL2 608 aa27.95■■■□□ 2.06
VEGFA-207ENST00000413642 UNC93AQ86WB7 457 aa27.95■■■□□ 2.06
VEGFA-207ENST00000413642 SLC2A14Q8TDB8 520 aa27.95■■■□□ 2.06
VEGFA-207ENST00000413642 WHAMMQ8TF30 809 aa27.95■■■□□ 2.06
VEGFA-207ENST00000413642 NIF3L1Q9GZT8 377 aa27.95■■■□□ 2.06
VEGFA-207ENST00000413642 LMAN1LQ9HAT1 526 aa27.95■■■□□ 2.06
VEGFA-207ENST00000413642 HPS4Q9NQG7 708 aa27.95■■■□□ 2.06
VEGFA-207ENST00000413642 KRT82Q9NSB4 513 aa27.95■■■□□ 2.06
VEGFA-207ENST00000413642 TRPM5Q9NZQ8 1165 aa27.95■■■□□ 2.06
VEGFA-207ENST00000413642 CACNA1HO95180 2353 aa27.94■■■□□ 2.06
VEGFA-207ENST00000413642 ZNF840PA6NDX5 716 aa27.94■■■□□ 2.06
VEGFA-207ENST00000413642 OTOL1A6NHN0 477 aaPredicted RBP27.94■■■□□ 2.06
VEGFA-207ENST00000413642 PPP1R3GB7ZBB8 358 aa27.94■■■□□ 2.06
VEGFA-207ENST00000413642 BEST1O76090 585 aa27.94■■■□□ 2.06
VEGFA-207ENST00000413642 USP17L7P0C7H9 530 aa27.94■■■□□ 2.06
VEGFA-207ENST00000413642 ARSAP15289 507 aa27.94■■■□□ 2.06
VEGFA-207ENST00000413642 HDCP19113 662 aa27.94■■■□□ 2.06
VEGFA-207ENST00000413642 PLCB2Q00722 1185 aa27.94■■■□□ 2.06
VEGFA-207ENST00000413642 MORC3Q14149 939 aa27.94■■■□□ 2.06
VEGFA-207ENST00000413642 ZNF268Q14587 947 aaPredicted RBP27.94■■■□□ 2.06
VEGFA-207ENST00000413642 CBWD6Q4V339 395 aa27.94■■■□□ 2.06
VEGFA-207ENST00000413642 CBWD3Q5JTY5 395 aa27.94■■■□□ 2.06
VEGFA-207ENST00000413642 CBWD5Q5RIA9 395 aa27.94■■■□□ 2.06
VEGFA-207ENST00000413642 TCERG1LQ5VWI1 586 aa27.94■■■□□ 2.06
VEGFA-207ENST00000413642 NUP93Q8N1F7 819 aa27.94■■■□□ 2.06
VEGFA-207ENST00000413642 ZMIZ2Q8NF64 920 aa27.94■■■□□ 2.06
VEGFA-207ENST00000413642 SCAMP5Q8TAC9 235 aa27.94■■■□□ 2.06
VEGFA-207ENST00000413642 SMOQ99835 787 aa27.94■■■□□ 2.06
VEGFA-207ENST00000413642 DUSP9Q99956 384 aaKnown RBP27.94■■■□□ 2.06
VEGFA-207ENST00000413642 EBF3Q9H4W6 596 aa27.94■■■□□ 2.06
VEGFA-207ENST00000413642 C8orf33Q9H7E9 229 aaPredicted RBP27.94■■■□□ 2.06
VEGFA-207ENST00000413642 KIF9Q9HAQ2 790 aa27.94■■■□□ 2.06
VEGFA-207ENST00000413642 TICRRQ7Z2Z1 1910 aa27.93■■■□□ 2.06
VEGFA-207ENST00000413642 PSMA7O14818 248 aa27.93■■■□□ 2.06
VEGFA-207ENST00000413642 NCAM2O15394 837 aa27.93■■■□□ 2.06
VEGFA-207ENST00000413642 SLC16A3O15427 465 aaKnown RBP27.93■■■□□ 2.06
VEGFA-207ENST00000413642 AP1G2O75843 785 aa27.93■■■□□ 2.06
VEGFA-207ENST00000413642 ABL1P00519 1130 aa27.93■■■□□ 2.06
VEGFA-207ENST00000413642 SP9P0CG40 484 aa27.93■■■□□ 2.06
VEGFA-207ENST00000413642 ADORA2BP29275 332 aa27.93■■■□□ 2.06
VEGFA-207ENST00000413642 CTHP32929 405 aa27.93■■■□□ 2.06
VEGFA-207ENST00000413642 MLLT6P55198 1093 aaPredicted RBP27.93■■■□□ 2.06
VEGFA-207ENST00000413642 LRRC63Q05C16 580 aa27.93■■■□□ 2.06
VEGFA-207ENST00000413642 INCA1Q0VD86 236 aa27.93■■■□□ 2.06
VEGFA-207ENST00000413642 TATDN2Q93075 761 aa27.93■■■□□ 2.06
VEGFA-207ENST00000413642 DHTKD1Q96HY7 919 aaPredicted RBP27.93■■■□□ 2.06
VEGFA-207ENST00000413642 CYP3A43Q9HB55 503 aa27.93■■■□□ 2.06
VEGFA-207ENST00000413642 RBM12Q9NTZ6 932 aaKnown RBP27.93■■■□□ 2.06
VEGFA-207ENST00000413642 RAB20Q9NX57 234 aa27.93■■■□□ 2.06
VEGFA-207ENST00000413642 ATP8B3O60423 1300 aa27.92■■■□□ 2.06
VEGFA-207ENST00000413642 NUP210Q8TEM1 1887 aaPredicted RBP27.92■■■□□ 2.06
VEGFA-207ENST00000413642 TNFRSF10BO14763 440 aa27.92■■■□□ 2.06
VEGFA-207ENST00000413642 CHRNB1P11230 501 aa27.92■■■□□ 2.06
VEGFA-207ENST00000413642 RPS9P46781 194 aaKnown RBP27.92■■■□□ 2.06
VEGFA-207ENST00000413642 ZXDBP98169 803 aa27.92■■■□□ 2.06
VEGFA-207ENST00000413642 MTAPQ13126 283 aa27.92■■■□□ 2.06
VEGFA-207ENST00000413642 ZNF77Q15935 545 aa27.92■■■□□ 2.06
VEGFA-207ENST00000413642 ITPRIPL2Q3MIP1 535 aa27.92■■■□□ 2.06
VEGFA-207ENST00000413642 FBXL13Q8NEE6 735 aa27.92■■■□□ 2.06
VEGFA-207ENST00000413642 SH3RF2Q8TEC5 729 aa27.92■■■□□ 2.06
VEGFA-207ENST00000413642 SMARCD1Q96GM5 515 aa27.92■■■□□ 2.06
VEGFA-207ENST00000413642 GTPBP4Q9BZE4 634 aaKnown RBP27.92■■■□□ 2.06
VEGFA-207ENST00000413642 RNF38Q9H0F5 515 aa27.92■■■□□ 2.06
VEGFA-207ENST00000413642 DMAP1Q9NPF5 467 aaPredicted RBP27.92■■■□□ 2.06
VEGFA-207ENST00000413642 R4GN57 208 aa27.92■■■□□ 2.06
VEGFA-207ENST00000413642 PROB1E7EW31 1015 aa27.91■■■□□ 2.06
VEGFA-207ENST00000413642 STX10O60499 249 aa27.91■■■□□ 2.06
VEGFA-207ENST00000413642 CILPO75339 1184 aa27.91■■■□□ 2.06
VEGFA-207ENST00000413642 YWHAQP27348 245 aa27.91■■■□□ 2.06
VEGFA-207ENST00000413642 STIM1Q13586 685 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms