RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 CHMP2BQ9UQN3 213 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 APOC4-APOC2K7ER74 178 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 C2CD2LO14523 706 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 B4GALT4O60513 344 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 APOC2P02655 101 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 TMEM132AQ24JP5 1023 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 SLC45A4Q5BKX6 768 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 ZNF667Q5HYK9 610 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 SYCP2LQ5T4T6 812 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 EEF1DP3Q658K8 133 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 METTL7BQ6UX53 244 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 MTDHQ86UE4 582 aaKnown RBP15.67■□□□□ 0.1
TTC39A-208ENST00000413473 TMEM192Q8IY95 271 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 SPATA18Q8TC71 538 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 ZNF570Q96NI8 536 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 TWNKQ96RR1 684 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 SDCBP2Q9H190 292 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 INO80B-WBP1J3KQ70 363 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 RNF8O76064 485 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 CXCL8P10145 99 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 ATF7IP2Q5U623 682 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 TSHZ1Q6ZSZ6 1077 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 LONP2Q86WA8 852 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 FAM13CQ8NE31 585 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 MIEF2Q96C03 454 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 NLRP4Q96MN2 994 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 INO80BQ9C086 356 aaPredicted RBP15.67■□□□□ 0.1
TTC39A-208ENST00000413473 PTPRHQ9HD43 1115 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 BTBD7Q9P203 1132 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 WDR35Q9P2L0 1181 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 NKX1-2Q9UD57 310 aaPredicted RBP15.67■□□□□ 0.1
TTC39A-208ENST00000413473 SIX4Q9UIU6 781 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 ZFP69BQ9UJL9 534 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 NUMBLQ9Y6R0 609 aa15.67■□□□□ 0.1
TTC39A-208ENST00000413473 KAT6AQ92794 2004 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 ZBTB42B2RXF5 422 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 MCF2LO15068 1137 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 WFS1O76024 890 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 TRUB2O95900 331 aaKnown RBP15.66■□□□□ 0.1
TTC39A-208ENST00000413473 PROZP22891 400 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 ELK3P41970 407 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 NPNTQ6UXI9 565 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 AEBP2Q6ZN18 517 aaPredicted RBP15.66■□□□□ 0.1
TTC39A-208ENST00000413473 FAM167AQ96KS9 214 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 CYTH2Q99418 400 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 MANSC1Q9H8J5 431 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 HMGXB4Q9UGU5 601 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 USP18Q9UMW8 372 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 ACKR2O00590 384 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 TM9SF1O15321 606 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 MT-ND3P03897 115 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 EDNRBP24530 442 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 EPHB2P29323 1055 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 RASSF2P50749 326 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 MMRN1Q13201 1228 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 HSDL1Q3SXM5 330 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 TREML2Q5T2D2 321 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 ZC3H18Q86VM9 953 aaKnown RBP15.66■□□□□ 0.1
TTC39A-208ENST00000413473 MAB21L3Q8N8X9 362 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 SLC4A11Q8NBS3 891 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 RFWD2Q8NHY2 731 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 KCNV2Q8TDN2 545 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 TRAPPC12Q8WVT3 735 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 PTPRN2Q92932 1015 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 ALKBH8Q96BT7 664 aaKnown RBP15.66■□□□□ 0.1
TTC39A-208ENST00000413473 C2orf40Q9H1Z8 148 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 VPS11Q9H270 941 aa15.66■□□□□ 0.1
TTC39A-208ENST00000413473 MGAMO43451 1857 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 ECM2O94769 699 aaPredicted RBP15.65■□□□□ 0.1
TTC39A-208ENST00000413473 TROVE2P10155 538 aaKnown RBP eCLIP15.65■□□□□ 0.1
TTC39A-208ENST00000413473 CRYMQ14894 314 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 ANKRD20A2Q5SQ80 823 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 SH3PXD2AQ5TCZ1 1133 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 ANKRD20A1Q5TYW2 823 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 ANKRD20A3Q5VUR7 823 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 DARS2Q6PI48 645 aaKnown RBP15.65■□□□□ 0.1
TTC39A-208ENST00000413473 LBX2Q6XYB7 198 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 LRRC6Q86X45 466 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 NCAPG2Q86XI2 1143 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 ZBTB10Q96DT7 871 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 BCO2Q9BYV7 579 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 SMYD3Q9H7B4 428 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 SLC5A4Q9NY91 659 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 KANSL3Q9P2N6 904 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 IGKV6-21A0A0C4DH24 114 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 ARIH2O95376 493 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 TGFB3P10600 412 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 GM2AP17900 193 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 SLC8A3P57103 927 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 PTPN11Q06124 597 aaPredicted RBP15.65■□□□□ 0.1
TTC39A-208ENST00000413473 DPH6Q7L8W6 267 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 CLNKQ7Z7G1 428 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 C1orf127Q8N9H9 656 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 ELOVL4Q9GZR5 314 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 FZD8Q9H461 694 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 RPF1Q9H9Y2 349 aaKnown RBP15.65■□□□□ 0.1
TTC39A-208ENST00000413473 RSAD1Q9HA92 442 aa15.65■□□□□ 0.1
TTC39A-208ENST00000413473 A0A0G2JND7 137 aa15.64■□□□□ 0.09
TTC39A-208ENST00000413473 TCRBV9S1A1TA0A576 114 aa15.64■□□□□ 0.09
TTC39A-208ENST00000413473 SMAPO00193 183 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms