RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 HEBP1Q9NRV9 189 aa20.02■□□□□ 0.8
TRIM56-202ENST00000412507 LMBRD1Q9NUN5 540 aa20.02■□□□□ 0.8
TRIM56-202ENST00000412507 FAM49BQ9NUQ9 324 aa20.02■□□□□ 0.8
TRIM56-202ENST00000412507 OBP2AQ9NY56 170 aa20.02■□□□□ 0.8
TRIM56-202ENST00000412507 COQ4Q9Y3A0 265 aa20.02■□□□□ 0.8
TRIM56-202ENST00000412507 MYOFQ9NZM1 2061 aa20.01■□□□□ 0.79
TRIM56-202ENST00000412507 ZNF263O14978 683 aa20.01■□□□□ 0.79
TRIM56-202ENST00000412507 CILPO75339 1184 aa20.01■□□□□ 0.79
TRIM56-202ENST00000412507 FCHO2Q0JRZ9 810 aa20.01■□□□□ 0.79
TRIM56-202ENST00000412507 IFRD2Q12894 506 aaPredicted RBP20.01■□□□□ 0.79
TRIM56-202ENST00000412507 WDR44Q5JSH3 913 aa20.01■□□□□ 0.79
TRIM56-202ENST00000412507 TPRG1Q6ZUI0 275 aa20.01■□□□□ 0.79
TRIM56-202ENST00000412507 SLC2A14Q8TDB8 520 aa20.01■□□□□ 0.79
TRIM56-202ENST00000412507 WHAMMQ8TF30 809 aa20.01■□□□□ 0.79
TRIM56-202ENST00000412507 SMARCD1Q96GM5 515 aa20.01■□□□□ 0.79
TRIM56-202ENST00000412507 NT5C1AQ9BXI3 368 aa20.01■□□□□ 0.79
TRIM56-202ENST00000412507 SRRTQ9BXP5 876 aaKnown RBP20.01■□□□□ 0.79
TRIM56-202ENST00000412507 FOXQ1Q9C009 403 aa20.01■□□□□ 0.79
TRIM56-202ENST00000412507 TRPC7Q9HCX4 862 aa20.01■□□□□ 0.79
TRIM56-202ENST00000412507 ATG2BQ96BY7 2078 aa20.01■□□□□ 0.79
TRIM56-202ENST00000412507 CACNA1HO95180 2353 aa20■□□□□ 0.79
TRIM56-202ENST00000412507 SOBPA7XYQ1 873 aa20■□□□□ 0.79
TRIM56-202ENST00000412507 AP1G2O75843 785 aa20■□□□□ 0.79
TRIM56-202ENST00000412507 CD72P21854 359 aa20■□□□□ 0.79
TRIM56-202ENST00000412507 FMO5P49326 533 aa20■□□□□ 0.79
TRIM56-202ENST00000412507 CELF5Q8N6W0 485 aaKnown RBP20■□□□□ 0.79
TRIM56-202ENST00000412507 BPIFB1Q8TDL5 484 aa20■□□□□ 0.79
TRIM56-202ENST00000412507 USP13Q92995 863 aaPredicted RBP20■□□□□ 0.79
TRIM56-202ENST00000412507 ZFYVE19Q96K21 471 aa20■□□□□ 0.79
TRIM56-202ENST00000412507 CYP2S1Q96SQ9 504 aa20■□□□□ 0.79
TRIM56-202ENST00000412507 PRRX2Q99811 253 aa20■□□□□ 0.79
TRIM56-202ENST00000412507 ARID3AQ99856 593 aa20■□□□□ 0.79
TRIM56-202ENST00000412507 DDX23Q9BUQ8 820 aaKnown RBP20■□□□□ 0.79
TRIM56-202ENST00000412507 TTLL2Q9BWV7 592 aa20■□□□□ 0.79
TRIM56-202ENST00000412507 KRT82Q9NSB4 513 aa20■□□□□ 0.79
TRIM56-202ENST00000412507 CCL26Q9Y258 94 aa20■□□□□ 0.79
TRIM56-202ENST00000412507 KANSL1LA0AUZ9 987 aa19.99■□□□□ 0.79
TRIM56-202ENST00000412507 C2orf78A6NCI8 922 aa19.99■□□□□ 0.79
TRIM56-202ENST00000412507 CHADO15335 359 aa19.99■□□□□ 0.79
TRIM56-202ENST00000412507 TRIM21P19474 475 aaKnown RBP19.99■□□□□ 0.79
TRIM56-202ENST00000412507 ADORA2BP29275 332 aa19.99■□□□□ 0.79
TRIM56-202ENST00000412507 TCF15Q12870 199 aa19.99■□□□□ 0.79
TRIM56-202ENST00000412507 ZNF394Q53GI3 561 aa19.99■□□□□ 0.79
TRIM56-202ENST00000412507 NUP93Q8N1F7 819 aa19.99■□□□□ 0.79
TRIM56-202ENST00000412507 FAXDC2Q96IV6 333 aa19.99■□□□□ 0.79
TRIM56-202ENST00000412507 SLC22A12Q96S37 553 aa19.99■□□□□ 0.79
TRIM56-202ENST00000412507 SMOQ99835 787 aa19.99■□□□□ 0.79
TRIM56-202ENST00000412507 NUP62CLQ9H1M0 184 aa19.99■□□□□ 0.79
TRIM56-202ENST00000412507 DMAP1Q9NPF5 467 aaPredicted RBP19.99■□□□□ 0.79
TRIM56-202ENST00000412507 TRPV5Q9NQA5 729 aa19.99■□□□□ 0.79
TRIM56-202ENST00000412507 TDP1Q9NUW8 608 aa19.99■□□□□ 0.79
TRIM56-202ENST00000412507 EHD2Q9NZN4 543 aa19.99■□□□□ 0.79
TRIM56-202ENST00000412507 TRPM5Q9NZQ8 1165 aa19.99■□□□□ 0.79
TRIM56-202ENST00000412507 SIT1Q9Y3P8 196 aa19.99■□□□□ 0.79
TRIM56-202ENST00000412507 ARNTLO00327 626 aa19.98■□□□□ 0.79
TRIM56-202ENST00000412507 GALR2O43603 387 aaPredicted RBP19.98■□□□□ 0.79
TRIM56-202ENST00000412507 BEST1O76090 585 aa19.98■□□□□ 0.79
TRIM56-202ENST00000412507 DCNP07585 359 aaKnown RBP19.98■□□□□ 0.79
TRIM56-202ENST00000412507 NUBP1P53384 320 aa19.98■□□□□ 0.79
TRIM56-202ENST00000412507 LRMPQ12912 555 aa19.98■□□□□ 0.79
TRIM56-202ENST00000412507 TAF10Q12962 218 aa19.98■□□□□ 0.79
TRIM56-202ENST00000412507 UBXN2BQ14CS0 331 aa19.98■□□□□ 0.79
TRIM56-202ENST00000412507 ARHGAP29Q52LW3 1261 aa19.98■□□□□ 0.79
TRIM56-202ENST00000412507 ARL14EPQ8N8R7 260 aaPredicted RBP19.98■□□□□ 0.79
TRIM56-202ENST00000412507 ZMIZ2Q8NF64 920 aa19.98■□□□□ 0.79
TRIM56-202ENST00000412507 PJA1Q8NG27 643 aa19.98■□□□□ 0.79
TRIM56-202ENST00000412507 CSGALNACT1Q8TDX6 532 aa19.98■□□□□ 0.79
TRIM56-202ENST00000412507 CYFIP2Q96F07 1278 aa19.98■□□□□ 0.79
TRIM56-202ENST00000412507 GBP4Q96PP9 640 aa19.98■□□□□ 0.79
TRIM56-202ENST00000412507 CISHQ9NSE2 258 aa19.98■□□□□ 0.79
TRIM56-202ENST00000412507 GCNT4Q9P109 453 aa19.98■□□□□ 0.79
TRIM56-202ENST00000412507 RWDD2AQ9UIY3 292 aa19.98■□□□□ 0.79
TRIM56-202ENST00000412507 MTF2Q9Y483 593 aaPredicted RBP19.98■□□□□ 0.79
TRIM56-202ENST00000412507 TRAV19A0A0A6YYK7 116 aa19.97■□□□□ 0.79
TRIM56-202ENST00000412507 SHISA7A6NL88 538 aa19.97■□□□□ 0.79
TRIM56-202ENST00000412507 TNFRSF10BO14763 440 aa19.97■□□□□ 0.79
TRIM56-202ENST00000412507 RTN3O95197 1032 aaPredicted RBP19.97■□□□□ 0.79
TRIM56-202ENST00000412507 GNA14O95837 355 aa19.97■□□□□ 0.79
TRIM56-202ENST00000412507 CKMP06732 381 aa19.97■□□□□ 0.79
TRIM56-202ENST00000412507 USP17L7P0C7H9 530 aa19.97■□□□□ 0.79
TRIM56-202ENST00000412507 YWHAQP27348 245 aa19.97■□□□□ 0.79
TRIM56-202ENST00000412507 MAP3K7CLP57077 242 aa19.97■□□□□ 0.79
TRIM56-202ENST00000412507 TRIM59Q8IWR1 403 aa19.97■□□□□ 0.79
TRIM56-202ENST00000412507 TTC39CQ8N584 583 aa19.97■□□□□ 0.79
TRIM56-202ENST00000412507 SCAMP5Q8TAC9 235 aa19.97■□□□□ 0.79
TRIM56-202ENST00000412507 RIN3Q8TB24 985 aa19.97■□□□□ 0.79
TRIM56-202ENST00000412507 FAM122AQ96E09 287 aa19.97■□□□□ 0.79
TRIM56-202ENST00000412507 SLITRK1Q96PX8 696 aa19.97■□□□□ 0.79
TRIM56-202ENST00000412507 MED15Q96RN5 788 aa19.97■□□□□ 0.79
TRIM56-202ENST00000412507 HNRNPABQ99729 332 aaKnown RBP19.97■□□□□ 0.79
TRIM56-202ENST00000412507 KIF9Q9HAQ2 790 aa19.97■□□□□ 0.79
TRIM56-202ENST00000412507 LTB4R2Q9NPC1 389 aa19.97■□□□□ 0.79
TRIM56-202ENST00000412507 PIAS3Q9Y6X2 628 aa19.97■□□□□ 0.79
TRIM56-202ENST00000412507 ZNF840PA6NDX5 716 aa19.96■□□□□ 0.79
TRIM56-202ENST00000412507 FAM170BA6NMN3 283 aa19.96■□□□□ 0.79
TRIM56-202ENST00000412507 FGFR1OPO95684 399 aaKnown RBP19.96■□□□□ 0.79
TRIM56-202ENST00000412507 ABL1P00519 1130 aa19.96■□□□□ 0.79
TRIM56-202ENST00000412507 FAM200BP0CF97 657 aa19.96■□□□□ 0.79
TRIM56-202ENST00000412507 HDCP19113 662 aa19.96■□□□□ 0.79
TRIM56-202ENST00000412507 PLA2G5P39877 138 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms