RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 ERBB2P04626 1255 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 CTSAP10619 480 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 MSNP26038 577 aaKnown RBP13.29□□□□□ -0.28
PMS1-204ENST00000409823 NDUFV1P49821 464 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 STILQ15468 1287 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 MGAT5BQ3V5L5 792 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 SLC8B1Q6J4K2 584 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 TRIM72Q6ZMU5 477 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 MON1BQ7L1V2 547 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 REXO1L1PQ8IX06 675 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 MCOLN2Q8IZK6 566 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 ZMIZ2Q8NF64 920 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 SMARCD1Q96GM5 515 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 PIWIL1Q96J94 861 aaKnown RBP13.29□□□□□ -0.28
PMS1-204ENST00000409823 C11orf84Q9BUA3 381 aaPredicted RBP13.29□□□□□ -0.28
PMS1-204ENST00000409823 OSGEPQ9NPF4 335 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 TLR9Q9NR96 1032 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 PLXNA4Q9HCM2 1894 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 MTMR11A4FU01 709 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 GOLGA8SH3BPF8 625 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 MMP8P22894 467 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 ANXA13P27216 316 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 NAP1L1P55209 391 aaKnown RBP13.29□□□□□ -0.28
PMS1-204ENST00000409823 GPR17Q13304 367 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 GPM6BQ13491 265 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 MAPRE1Q15691 268 aaKnown RBP13.29□□□□□ -0.28
PMS1-204ENST00000409823 PTPROQ16827 1216 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 ARHGAP29Q52LW3 1261 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 C4orf50Q6ZRC1 276 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 RBM23Q86U06 439 aaKnown RBP13.29□□□□□ -0.28
PMS1-204ENST00000409823 CLEC4CQ8WTT0 213 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 CTNNBL1Q8WYA6 563 aaPredicted RBP13.29□□□□□ -0.28
PMS1-204ENST00000409823 PLVAPQ9BX97 442 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 MYH10P35580 1976 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 PER2O15055 1255 aa13.28□□□□□ -0.28
PMS1-204ENST00000409823 SLC8A3P57103 927 aa13.28□□□□□ -0.28
PMS1-204ENST00000409823 ERVK-21P61565 698 aa13.28□□□□□ -0.28
PMS1-204ENST00000409823 KIF5AQ12840 1032 aa13.28□□□□□ -0.28
PMS1-204ENST00000409823 SCAMP5Q8TAC9 235 aa13.28□□□□□ -0.28
PMS1-204ENST00000409823 CNOT8Q9UFF9 292 aaKnown RBP13.28□□□□□ -0.28
PMS1-204ENST00000409823 RWDD3Q9Y3V2 267 aa13.28□□□□□ -0.28
PMS1-204ENST00000409823 PCDHB5Q9Y5E4 795 aa13.28□□□□□ -0.28
PMS1-204ENST00000409823 BACE2Q9Y5Z0 518 aa13.28□□□□□ -0.28
PMS1-204ENST00000409823 ANKRD62A6NC57 917 aa13.28□□□□□ -0.28
PMS1-204ENST00000409823 C5orf67F2Z3F1 127 aa13.28□□□□□ -0.28
PMS1-204ENST00000409823 ZSCAN12O43309 604 aa13.28□□□□□ -0.28
PMS1-204ENST00000409823 LILRB3O75022 631 aa13.28□□□□□ -0.28
PMS1-204ENST00000409823 GRAP2O75791 330 aa13.28□□□□□ -0.28
PMS1-204ENST00000409823 CDH5P33151 784 aaPredicted RBP13.28□□□□□ -0.28
PMS1-204ENST00000409823 ARHGAP25P42331 645 aa13.28□□□□□ -0.28
PMS1-204ENST00000409823 RNASE9P60153 205 aaKnown RBP13.28□□□□□ -0.28
PMS1-204ENST00000409823 PTP4A2Q12974 167 aa13.28□□□□□ -0.28
PMS1-204ENST00000409823 TAF5Q15542 800 aa13.28□□□□□ -0.28
PMS1-204ENST00000409823 NFE2Q16621 373 aaPredicted RBP13.28□□□□□ -0.28
PMS1-204ENST00000409823 TIFAQ96CG3 184 aa13.28□□□□□ -0.28
PMS1-204ENST00000409823 BTBD6Q96KE9 485 aa13.28□□□□□ -0.28
PMS1-204ENST00000409823 TRIM7Q9C029 511 aa13.28□□□□□ -0.28
PMS1-204ENST00000409823 GOLPH3Q9H4A6 298 aa13.28□□□□□ -0.28
PMS1-204ENST00000409823 COLQQ9Y215 455 aaPredicted RBP13.28□□□□□ -0.28
PMS1-204ENST00000409823 SEC24AO95486 1093 aa13.27□□□□□ -0.28
PMS1-204ENST00000409823 NOP2P46087 812 aaKnown RBP13.27□□□□□ -0.28
PMS1-204ENST00000409823 ADIGQ0VDE8 80 aa13.27□□□□□ -0.28
PMS1-204ENST00000409823 RAB30Q15771 203 aa13.27□□□□□ -0.28
PMS1-204ENST00000409823 C18orf8Q96DM3 657 aa13.27□□□□□ -0.28
PMS1-204ENST00000409823 NOX5Q96PH1 765 aa13.27□□□□□ -0.28
PMS1-204ENST00000409823 CYP4F11Q9HBI6 524 aa13.27□□□□□ -0.28
PMS1-204ENST00000409823 LUC7LQ9NQ29 371 aaKnown RBP13.27□□□□□ -0.28
PMS1-204ENST00000409823 COG5Q9UP83 839 aa13.27□□□□□ -0.28
PMS1-204ENST00000409823 VCANP13611 3396 aa13.27□□□□□ -0.28
PMS1-204ENST00000409823 CARNS1A5YM72 827 aa13.27□□□□□ -0.29
PMS1-204ENST00000409823 KLRC2P26717 231 aa13.27□□□□□ -0.29
PMS1-204ENST00000409823 GPC5P78333 572 aa13.27□□□□□ -0.29
PMS1-204ENST00000409823 CFAP221Q4G0U5 840 aa13.27□□□□□ -0.29
PMS1-204ENST00000409823 PHF13Q86YI8 300 aaPredicted RBP13.27□□□□□ -0.29
PMS1-204ENST00000409823 MRPL43Q8N983 215 aaKnown RBP13.27□□□□□ -0.29
PMS1-204ENST00000409823 ZNF461Q8TAF7 563 aa13.27□□□□□ -0.29
PMS1-204ENST00000409823 SLC35G2Q8TBE7 412 aa13.27□□□□□ -0.29
PMS1-204ENST00000409823 GIPC2Q8TF65 315 aa13.27□□□□□ -0.29
PMS1-204ENST00000409823 PRO3102Q9H379 93 aa13.27□□□□□ -0.29
PMS1-204ENST00000409823 DMAP1Q9NPF5 467 aaPredicted RBP13.27□□□□□ -0.29
PMS1-204ENST00000409823 CTTNBP2NLQ9P2B4 639 aa13.27□□□□□ -0.29
PMS1-204ENST00000409823 NLRC5Q86WI3 1866 aa13.27□□□□□ -0.29
PMS1-204ENST00000409823 C2orf71A6NGG8 1288 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 ESPNB1AK53 854 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 H3BNC9 293 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 XPO1O14980 1071 aaKnown RBP13.26□□□□□ -0.29
PMS1-204ENST00000409823 SETSIPP0DME0 302 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 PLA2G4AP47712 749 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 OR6B2Q6IFH4 312 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 C16orf45Q96MC5 204 aaPredicted RBP13.26□□□□□ -0.29
PMS1-204ENST00000409823 PAPSS1O43252 624 aaPredicted RBP13.26□□□□□ -0.29
PMS1-204ENST00000409823 TGM5O43548 720 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 MOCS3O95396 460 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 RB1P06400 928 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 USP17L7P0C7H9 530 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 TMEM253P0C7T8 217 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 TKTL1P51854 596 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 RPL7AP62424 266 aaKnown RBP13.26□□□□□ -0.29
PMS1-204ENST00000409823 MTMR3Q13615 1198 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 C10orf76Q5T2E6 689 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms