RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 DPYSL4O14531 572 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 F11P03951 625 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 PAEPP09466 180 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 CD19P15391 556 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 NPR3P17342 541 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 PFKLP17858 780 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 CDK11BP21127 795 aaKnown RBP11.55□□□□□ -0.56
CHMP3-205ENST00000409810 WEE1P30291 646 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 RAD23BP54727 409 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 MFAP3P55082 362 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 MAP3K7CLP57077 242 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 CYP4F8P98187 520 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 IFRD2Q12894 506 aaPredicted RBP11.55□□□□□ -0.56
CHMP3-205ENST00000409810 STILQ15468 1287 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 SGO2Q562F6 1265 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 FAM78AQ5JUQ0 283 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 PPP1R26Q5T8A7 1209 aaPredicted RBP11.55□□□□□ -0.56
CHMP3-205ENST00000409810 CDKAL1Q5VV42 579 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 ARHGAP17Q68EM7 881 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 SMYD5Q6GMV2 418 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 PARM1Q6UWI2 310 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 PAQR9Q6ZVX9 377 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 UBR7Q8N806 425 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 PDZD8Q8NEN9 1154 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 DEPDC1BQ8WUY9 529 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 OVCA2Q8WZ82 227 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 FGF14Q92915 247 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 KHSRPQ92945 711 aaKnown RBP eCLIP11.55□□□□□ -0.56
CHMP3-205ENST00000409810 TTLL2Q9BWV7 592 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 DUSP16Q9BY84 665 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 FBXO44Q9H4M3 255 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 EPHX3Q9H6B9 360 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 CSNK1G1Q9HCP0 422 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 UBE2TQ9NPD8 197 aaPredicted RBP11.55□□□□□ -0.56
CHMP3-205ENST00000409810 TRPM5Q9NZQ8 1165 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 HESX1Q9UBX0 185 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 APEX2Q9UBZ4 518 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 KIAA1257Q9ULG3 409 aa11.55□□□□□ -0.56
CHMP3-205ENST00000409810 TRAV19A0A0A6YYK7 116 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 SYCE3A1L190 88 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 VDRP11473 427 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 SRFP11831 508 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 KRT5P13647 590 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 RFX1P22670 979 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 PON1P27169 355 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 YWHAQP27348 245 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 AVPR1AP37288 418 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 SLC5A3P53794 718 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 CACNA2D1P54289 1103 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 PFKPQ01813 784 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 MIIPQ5JXC2 388 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 FKBP15Q5T1M5 1219 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 CLEC20AQ6ZU45 233 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 RRAGAQ7L523 313 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 ARHGEF19Q8IW93 802 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 SLC44A3Q8N4M1 653 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 RSAD2Q8WXG1 361 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 FBXO32Q969P5 355 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 KCNK16Q96T55 309 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 SMOQ99835 787 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 KXD1Q9BQD3 176 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 KIF9Q9HAQ2 790 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 TRPV4Q9HBA0 871 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 FANCLQ9NW38 375 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 OBP2AQ9NY56 170 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 TAB2Q9NYJ8 693 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 FBXL21Q9UKT6 434 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 TRIOO75962 3097 aa11.54□□□□□ -0.56
CHMP3-205ENST00000409810 BECN2A8MW95 431 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 NRG2O14511 850 aaPredicted RBP11.53□□□□□ -0.56
CHMP3-205ENST00000409810 TADA3O75528 432 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 CAVIN2O95810 425 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 SLC9A1P19634 815 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 ACO1P21399 889 aaKnown RBP11.53□□□□□ -0.56
CHMP3-205ENST00000409810 ZNF165P49910 485 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 BCAT1P54687 386 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 TPM4P67936 248 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 KRT31Q15323 416 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 GOLGA7BQ2TAP0 167 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 TMEM31Q5JXX7 168 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 STXBP5Q5T5C0 1151 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 TANGO2Q6ICL3 276 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 PHLDB3Q6NSJ2 640 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 TRIM67Q6ZTA4 783 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 TMEM150AQ86TG1 271 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 MON1AQ86VX9 555 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 ARID3BQ8IVW6 561 aaPredicted RBP11.53□□□□□ -0.56
CHMP3-205ENST00000409810 YAF2Q8IY57 180 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 CMTM8Q8IZV2 173 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 AOPEPQ8N6M6 819 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 MAB21L3Q8N8X9 362 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 ANKRD52Q8NB46 1076 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 RBBP8NLQ8NC74 664 aaPredicted RBP11.53□□□□□ -0.56
CHMP3-205ENST00000409810 ZMIZ2Q8NF64 920 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 KAT5Q92993 513 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 ZSWIM3Q96MP5 696 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 TRPC7Q9HCX4 862 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 SLC2A4RGQ9NR83 387 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 TMEM30AQ9NV96 361 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 TSPAN16Q9UKR8 245 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms