RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 ETS1P14921 441 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 CPA2P48052 419 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 GPX6P59796 221 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 RIPOR1Q6ZS17 1223 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 PRRT2Q7Z6L0 340 aaPredicted RBP16.16■□□□□ 0.18
LIMS2-205ENST00000409455 CHSY1Q86X52 802 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 NME8Q8N427 588 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 STKLD1Q8NE28 680 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 KLF6Q99612 283 aaPredicted RBP16.16■□□□□ 0.18
LIMS2-205ENST00000409455 NMUR2Q9GZQ4 415 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 ACAD9Q9H845 621 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 LMCD1Q9NZU5 365 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 PHF24Q9UPV7 400 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 COQ4Q9Y3A0 265 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 COL11A1P12107 1806 aaPredicted RBP16.15■□□□□ 0.18
LIMS2-205ENST00000409455 GOLGA8SH3BPF8 625 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 GOLGA8MH3BSY2 632 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 BAG2O95816 211 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 CALCAP01258 141 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 GLRA2P23416 452 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 ARL4CP56559 192 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 SNRPFP62306 86 aaKnown RBP16.15■□□□□ 0.18
LIMS2-205ENST00000409455 CDC16Q13042 620 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 PRKD1Q15139 912 aaPredicted RBP16.15■□□□□ 0.18
LIMS2-205ENST00000409455 LBX2Q6XYB7 198 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 LCA5Q86VQ0 697 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 CBWD2Q8IUF1 395 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 TAS1R2Q8TE23 839 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 TTC1Q99614 292 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 MRPL47Q9HD33 250 aaKnown RBP16.15■□□□□ 0.18
LIMS2-205ENST00000409455 KLHL11Q9NVR0 708 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 BTBD7Q9P203 1132 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 CLEC11AQ9Y240 323 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 TESPA1A2RU30 521 aaPredicted RBP16.15■□□□□ 0.18
LIMS2-205ENST00000409455 C2orf71A6NGG8 1288 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 BANF1O75531 89 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 NR3C2P08235 984 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 KRT10P13645 584 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 ACTR3P61158 418 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 VSIG10LQ86VR7 867 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 ARHGEF4Q9NR80 690 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 TMCO1Q9UM00 188 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 POLIQ9UNA4 740 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 CLUHO75153 1309 aa16.15■□□□□ 0.18
LIMS2-205ENST00000409455 CXCL11O14625 94 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 LGR5O75473 907 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 PENKP01210 267 aaPredicted RBP16.14■□□□□ 0.17
LIMS2-205ENST00000409455 ENO1P06733 434 aaKnown RBP16.14■□□□□ 0.17
LIMS2-205ENST00000409455 SSTR1P30872 391 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 LSAMPQ13449 338 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 C1orf146Q5VVC0 180 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 C3orf62Q6ZUJ4 267 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 ACAD11Q709F0 780 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 ENOSF1Q7L5Y1 443 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 HAUS6Q7Z4H7 955 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 ZNF677Q86XU0 584 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 MYLK4Q86YV6 388 aaPredicted RBP16.14■□□□□ 0.17
LIMS2-205ENST00000409455 MZB1Q8WU39 189 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 TTC17Q96AE7 1141 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 PANX3Q96QZ0 392 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 DHRS4Q9BTZ2 278 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 OCEL1Q9H607 264 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 ACSS3Q9H6R3 686 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 SGK1O00141 431 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 TM7SF2O76062 418 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 IFNB1P01574 187 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 MT-ND3P03897 115 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 PYGBP11216 843 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 MAP7Q14244 749 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 DNAL1Q4LDG9 190 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 PABPC1LQ4VXU2 614 aaKnown RBP16.14■□□□□ 0.17
LIMS2-205ENST00000409455 MAP1SQ66K74 1059 aaPredicted RBP16.14■□□□□ 0.17
LIMS2-205ENST00000409455 MON1BQ7L1V2 547 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 PCGF5Q86SE9 256 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 ALYREFQ86V81 257 aaKnown RBP16.14■□□□□ 0.17
LIMS2-205ENST00000409455 ULK2Q8IYT8 1036 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 RCOR2Q8IZ40 523 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 RBM15BQ8NDT2 890 aaKnown RBP16.14■□□□□ 0.17
LIMS2-205ENST00000409455 NSUN6Q8TEA1 469 aaKnown RBP16.14■□□□□ 0.17
LIMS2-205ENST00000409455 CYTH2Q99418 400 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 PCDH9Q9HC56 1237 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 PCDHB2Q9Y5E7 798 aa16.14■□□□□ 0.17
LIMS2-205ENST00000409455 PI4K2BG5E9Z4 385 aa16.13■□□□□ 0.17
LIMS2-205ENST00000409455 OPHN1O60890 802 aa16.13■□□□□ 0.17
LIMS2-205ENST00000409455 ETS2P15036 469 aa16.13■□□□□ 0.17
LIMS2-205ENST00000409455 BGNP21810 368 aa16.13■□□□□ 0.17
LIMS2-205ENST00000409455 GCNT1Q02742 428 aa16.13■□□□□ 0.17
LIMS2-205ENST00000409455 MIER3Q7Z3K6 550 aa16.13■□□□□ 0.17
LIMS2-205ENST00000409455 USP37Q86T82 979 aa16.13■□□□□ 0.17
LIMS2-205ENST00000409455 NLRX1Q86UT6 975 aa16.13■□□□□ 0.17
LIMS2-205ENST00000409455 ELMO3Q96BJ8 720 aa16.13■□□□□ 0.17
LIMS2-205ENST00000409455 FAM111AQ96PZ2 611 aa16.13■□□□□ 0.17
LIMS2-205ENST00000409455 C11orf70Q9BRQ4 267 aa16.13■□□□□ 0.17
LIMS2-205ENST00000409455 GPAMQ9HCL2 828 aa16.13■□□□□ 0.17
LIMS2-205ENST00000409455 DRG1Q9Y295 367 aaKnown RBP16.13■□□□□ 0.17
LIMS2-205ENST00000409455 OTOFQ9HC10 1997 aa16.13■□□□□ 0.17
LIMS2-205ENST00000409455 LOXHD1Q8IVV2 1947 aa16.13■□□□□ 0.17
LIMS2-205ENST00000409455 FAM237BA0A1B0GVD1 139 aa16.13■□□□□ 0.17
LIMS2-205ENST00000409455 DENND3A2RUS2 1198 aa16.13■□□□□ 0.17
LIMS2-205ENST00000409455 RNASEH1O60930 286 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms